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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0301600 |
| Transcript ID | LotjaGi2g1v0301600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | cAMP-regulated phosphoprotein-like protein; TAIR: AT5G64130.1 cAMP-regulated phosphoprotein 19-related protein; Swiss-Prot: sp|Q9P305|IGO2_YEAST mRNA stability protein IGO2; TrEMBL-Plants: tr|I1J5S9|I1J5S9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0301600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77565216..77567714) extracted from Lotus japonicus Gifu genome v1.2.
GTGGCAACGAACGCAATTGGAGATGCTTAGAACAATCGGTTTCATCATCATCACCATCATCTCTGAGTTTCAACTTGGCA CTTGAGTTTCGTTTCGTTTCAGAACACAAGATCGCCAAATCCAAACTCTCTTACGTTACGGTACGATTCATTCGATTTCT GCTTCTATTGATTCGGTTTGATTTCATTTCATTTCACACTCAATTGGAATTGGATTGATCCGTGTTATGTAGATTGAAAT CAACAAGATTCTTACGATCATGTATTCGTTTTTTTGGTGTACAGAGCAATGTCAGAGGCTAAAGATGTTGAGGATTTGAA GAATTCTCCTGAAGGTGACGTTAACTCCCATGATTCTGGGGATGATCTCAAAGAATCAGATAAAGATCAAAATGATGAAA GCCCCATGCCTTCACCTCAGCAGGAGGTAACTGCTTTTCTGATTCTCCATTTTGAATGTATTTTGTATGAATAGGAATTG CTTTTGAACAAGAAAAGTTGCATTTGGCAGTTTGGGAATGTTAATTTAGCAACCCTAGTTTATGAATGAAATCTGAGTGC TTTTTATTCTGAATTCTGATGCACATAGAGGTATGATTGATATAACGAGTCATCGGATATCGGTTGTAAGTTTGTGTATT AGTTCACCACATTACTATTTCATTTACATGTGAAAATGAGTTTTTTTTAAGTGGGCTTTAGATAATACTGAAATCAATTA AGCATTTGGAAGGCATTTTATCATCATGGTTGGGGCGGGGGGTTTACAATTTTTATGGTTAGCGTTGGTATAGAATATCG TAAGGTTTATGTTATTATGTTGTAGTATCATTTGCTGTAAATTTGTTTTTACAGGAAGAAGCTGTGAAGAAGAAGTATGG AGGGATGTTGCCAAAGAAGCCTCCACTAATATCTAAGGTCACTTGCCCCTATCTGATCTTGATTCTTTGATGCTCCGCTG CTTCACTTCCTCCGTCCTGCAATCGTCTATGTTAATGTGAAAATGTTATTCCGAAACTGATTTTTCTTCATGAATAATTT TAACTTTTGGCAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCTTTAGGGAAGGTATTGTCCGGCCTCAGAA ACTTCTATTTCTCATTATGTCATAAGAACTTTAATTTGACCTTCAGTACATTTTGTTTCGTTGCCTGATATCCTTGACTT TTTTCTATGATTGTTCGAACTTCGAACAGCAAGGAGCAAATAAGCCTAAAGGACCACTTGAAGCACTTCGCCCGAAGTTG CAGGTAAAGATACTTTTCTATGTTTCTATGAATATATATTGATTATTTAATGATTGGTGTGACTAACAACAGATGCAATT TCACCTTGGTTGATCTCATCCCTCCTGGTGTATTTCTAAGTGTTTTTGCAATAGTTCTAAATGCCCCCAATAGAGTCAGA TTAAATTGCAGAACCATTATAAAGACTGGATCTTTTGTTGTTGTATGGACTTCGGAATACAATCTCTTCTATGTTACAGA TATGCTATGCACTTGATGCAATTCAGTTGGATACGAATCCCTTTTCTTATATTTACATTGATATTTTTATCACAACTTGG GGGCCAAACAGGAGTATGATTCATTATTGTAGCATGTTTCTAAAAGTAGCCATTGATCAATTACATGGCTCATAAACTAT ACATTGCAATAAACATATTCCTATGCATATCATTGAAATTTGAATACATTTTTTTGACATTGCCTTTTGGTTTTCTGTTC CCCATCTTGGGGTCCTACCTACAATGGTATCAGCCAACACACCAGCAGGCCCGTTCAAGGCGCTCAGCTTATGCTCCATC AGATGATTGTGAAGGAGGTATATGCGAATAGGGTTATTTCTTGTGTTCCAAAAGTTCGAGTTCTGTGTTTAAACTGAACA CCCTGTTGAGCTACCTTTCTATTTTGACAGTTGATAATGCGTCTGCAGCGGATGATAGTGCTGCTGAACATGTTGACGAC GATAAAAATGATACTGCTCAGGACCAAAGCTGTCATTAATAGCTTCAGGTTTGAGCTACAAAATTGCATTCTGACACAGT GGTGCTTTCTTCTGAGTTTAGAAGCAAATGATCACACATATTAGAGTTACTTGTGCTAATAACTAAAGTGGGAGTTTTGA AACAGTTGCTACCATGAATTAGATAGATATACTCTTGGATAGTATGAGATTTCATGATGTGTTAGGATTACACAACGAGA GATCTTGGACATTCATTTGTGAAGGCGCGATTGTGCCTGTTGTAACATTTAACATCTTACAAAATATGATCACCGTCTTT AATAAGATTGACATGAAAGTAATAATATGTTTGCAGTAGTAGATTAGCATATTATAGTCACGTTTTGTGCTTCTCTGAGT TACGAATAAAAAACAGTTTTCATATTAAAATCAAAGAGCAAATTAGAAATTATTTACCAAAAGAAAATAAATCCTACCGC CCTTTCCCTTTGTGTCCTG
CDS sequence (LotjaGi2g1v0301600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGAGGCTAAAGATGTTGAGGATTTGAAGAATTCTCCTGAAGGTGACGTTAACTCCCATGATTCTGGGGATGATCT CAAAGAATCAGATAAAGATCAAAATGATGAAAGCCCCATGCCTTCACCTCAGCAGGAGGAAGAAGCTGTGAAGAAGAAGT ATGGAGGGATGTTGCCAAAGAAGCCTCCACTAATATCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCT TTAGGGAAGCAAGGAGCAAATAAGCCTAAAGGACCACTTGAAGCACTTCGCCCGAAGTTGCAGCCAACACACCAGCAGGC CCGTTCAAGGCGCTCAGCTTATGCTCCATCAGATGATTGTGAAGGAGTTGATAATGCGTCTGCAGCGGATGATAGTGCTG CTGAACATGTTGACGACGATAAAAATGATACTGCTCAGGACCAAAGCTGTCATTAA
Protein sequence (LotjaGi2g1v0301600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEAKDVEDLKNSPEGDVNSHDSGDDLKESDKDQNDESPMPSPQQEEEAVKKKYGGMLPKKPPLISKDHERAYFDSADWA LGKQGANKPKGPLEALRPKLQPTHQQARSRRSAYAPSDDCEGVDNASAADDSAAEHVDDDKNDTAQDQSCH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| MobiDBLite | 1 | 36 | 36 | - | – | |
| PANTHER | 28 | 126 | 99 | 4.0E-51 | – | |
| PANTHER | 28 | 126 | 99 | 4.0E-51 | ||
| Pfam | 41 | 113 | 73 | 8.5E-23 | ||
| MobiDBLite | 82 | 151 | 70 | - | – | |
| MobiDBLite | 131 | 151 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0301600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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