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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0301800 |
Transcript ID | LotjaGi2g1v0301800.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Methyltransferase-like protein; TAIR: AT1G69523.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9H8H3|MET7A_HUMAN Methyltransferase-like protein 7A; TrEMBL-Plants: tr|I3SD82|I3SD82_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0301800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77570992..77574058) extracted from Lotus japonicus Gifu genome v1.2.
TAGTCAATAGATTAGATTTTAACAAAAATGCTGAAATTCATAAACACTTTGAGTTTGAAGTTTCAAAATCACTGGTGTTC TGAGTTTAATGATGAATCTTCGTTCTCTTCCTGCAACAGCATCTTTCGTTTCGTCCACTCCCAAAGCAACCAATGATGCT ACCCACAACCACAAGTATCTGAAGCTCCCAAAGCTGATCAACTCAGGCGCGCCAAGCAAACTCACCACCGAGTTTCTCTC CCCTGACTCGCCAGACCGCACCGGCACCACCATCACCAAACCATGCTTCTGTGGAAGAAGGCATTTCATAGAAGCTGCAA CACTTGGAACTACACGGTTCCCAATTCAACCAGCCAGAGCCAGCAATTTAGAACCTGATTCTGATTACAAGGTAATGGCT TATTTTCCCTCATGACCCAGATAGCAGAAAATGGAAATGTTATCCCCTTTGACTTCAAATTCTTGCCAAAATTGACTTTT CCACTTTTTTGGTGCAGGTTTTGCTTAACAAGTTTCACCCACCAAGACCTGATTGGTATGAGGAGCTATATGCTTGGGTT TTGAATTCAGCTACTAAGTCTTATGAAGCTGAGGTTTATTGTTAATTCGTTATGTACATAAGTATATTGAACTGTTTTGA GTCTTTTTTATTTCATTGATTGGTGTTAAGTTTTTGTTATATTGCATTGAAATCATGTTTGGGATGTTTTCTTGTAAGGT TGCTAAGTACAAGTCTCAAATCTTCAGTAACTTGAAGGGGAAGGCTAACAGAATCTTGGAGATTGGCATTGGACCTGGTC TTAACCTCAGTTATTATGGTAGTGATCCAGGTGTGCAGGTTGTTGGCATTGATCCAAACTTGAAGATGGAAAAGTATGCT CAGTCCTCGGCTGAATCGGCTGGACTGCCACTTTCAAATTTCGAGTTTATACAAGCTGTATGCATTGAATTCTCACTAGT TTTTAACTCTTTGTCTTGAATGAAAAGAGGAGCATTTCCATAGAGAATTTATGACCTAAATGATTATTACTTGTTATTCA ACAAAACCTTTTAGTTGGTAGCATACATTGCAAAGCAACATGTTTATAGATGCTTTCATTGCTTGTTATGATTGGGGCCT ATGTAGTCATAGTTTGTTTCATGATAATGAATTTTTTCACTAGTTTAGTATTTCAGTATATGTTATCAGTTGATCTTAAA ATCATTTGTATTTTCTGAAGCAGGCATTTTCATAGAGATCCTTCGTTTATAAATCGGATCGTATCCCTGTATTGTTTTAT TGAATTTATTGTCGTGTGCTTTTGTGCTAGTGTTTTGCTAGTTGATCGTCAAATTTTGAATTTTTCTCTATTTAGGTAGG AGAGTCTATACCACTAAGTGATGCTTCAGTCGATGCAGTTGTTGGAACACTTGTATTGTGTTCTGTTAAATATGTTGATT TGACACTGAAAGGTAATAAAACTTTAGCTTTCTGTTTTTGTTCAAATATTTTGGCTTCCTTTGGGATCTGATGCAGAGAG GACATTAAAACAAGAGAGGAGCTTTTACTAAATCCATGTTGTCTATATTAGTTAACAATCGTACTTATGTGTATGCCTTA ACTAGGTCGTGTAATTATTATATTTATTTAGCTGCAATTTAGTTTATCTCAACCTGAAACAATTGTTTGTGTGAAAATTT GGTTAGAAAGCTGGAAAAAACAGCTAGTTTACAGCATTATGTGGTATTTCTATTGTAGAATTGACCAGAAAAGATAGAGA AAAAAGACTTGGCAGGTTGAATATATGAGATGATTGAAATCATAAATTATGCTTTCCTTCACATCTCAAGACACTTATTC ATCATCCTCTAATATTTGTTTCAATGTTACACCTGCTTGTACTGTTGCTTGGTGTAACGTACGGTGGAAATAGATTGGCC CCAGGTGAACTTCGCCTGTAATGCTGAGGTGTTCAAATTCTATAGTTGACTATGCCTAACAAACCATTCTCTGATCCGAG ACTTAATCCCACAACTATGTCAGCAGGAATTCTCGATTGAAAAATGCATGTTTCTTTGAGTTTAAATTTTAACAATCATA AATACAGTAAACAATTTAAGGGAGTATCCAGATAGAGAGTCTTCACCTACACCATTCTATGATGTTGATATCTTATGTGT TTTTGTGTGTCATTAGTTGTATAGCACTTTGAAATCCAATTCGAGATTATCATCTAAATTGCACTTGGTATGCAGAAGTG ATGAGGGTGCTGCGACCTGGTGGACTTTATGTGTTTGTGGAACATGTAGCCGAGAAAGGTCTAAACATAACTTTTTCAAT TCATTGTCGAAATGGAAACCAGTTAACTTGAGAAATAGCTTATTTATTTTTTGTGTTTTTATGGAGATACAGATGGAACA TTTCTCAAATTTTTACAGAGAGTTCTTGATCCACTGCAACAGACAGTTGCCGATGGGTGTCATCTTTCTAGGGAAACTGG AAACAATATATCCAGCGCTGGATTTTCTAATGTTGAGCTTGAGATGGCATACTTATCAAATGCTTCATTTGTAAACCCCC ATATATATGGAATAGCTTACAAGTAGCATCAATTGCATATTTGCTTTGCCTGCCGGTAAGGTTGCTGGGAAAGGATTATA GCCATTTTCAGGTACTTACACACACTATAGTGCTGGTTTCGATATTAACAACCCGCTGAGTTGTCACTCTAACCTTGAAG CTTTGCTGTGTACAAACATGTTTACATATATGTGCTCACCAATTCAGCACCAAGTTCAACTTGCATTGCCTAATGGTTGA GCTATACTGGATATGCATGTTTTGAACTAGATTATGGTGGTGCATCTAACCATCTGATTATTTATGCAGAAGCTTTTGCT GCGCATCTGCTGTTGTTGTTACCAACTATTTTCACCAGAAACATTTGTATAACTTGTATAACAATTTAGTGTGGATTCTT GGTATCCAAAGGAAAGGCAGTTATCTGTCAACATCCAACTCCATTAATAATGTAATGATGAAATTGGCACTCCTGCGTTG AGATTATGTATATCCTTGTTAATTTCC
CDS sequence (LotjaGi2g1v0301800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAATCTTCGTTCTCTTCCTGCAACAGCATCTTTCGTTTCGTCCACTCCCAAAGCAACCAATGATGCTACCCACAA CCACAAGTATCTGAAGCTCCCAAAGCTGATCAACTCAGGCGCGCCAAGCAAACTCACCACCGAGTTTCTCTCCCCTGACT CGCCAGACCGCACCGGCACCACCATCACCAAACCATGCTTCTGTGGAAGAAGGCATTTCATAGAAGCTGCAACACTTGGA ACTACACGGTTCCCAATTCAACCAGCCAGAGCCAGCAATTTAGAACCTGATTCTGATTACAAGGTTTTGCTTAACAAGTT TCACCCACCAAGACCTGATTGGTATGAGGAGCTATATGCTTGGGTTTTGAATTCAGCTACTAAGTCTTATGAAGCTGAGG TTGCTAAGTACAAGTCTCAAATCTTCAGTAACTTGAAGGGGAAGGCTAACAGAATCTTGGAGATTGGCATTGGACCTGGT CTTAACCTCAGTTATTATGGTAGTGATCCAGGTGTGCAGGTTGTTGGCATTGATCCAAACTTGAAGATGGAAAAGTATGC TCAGTCCTCGGCTGAATCGGCTGGACTGCCACTTTCAAATTTCGAGTTTATACAAGCTGTAGGAGAGTCTATACCACTAA GTGATGCTTCAGTCGATGCAGTTGTTGGAACACTTGTATTGTGTTCTGTTAAATATGTTGATTTGACACTGAAAGAAGTG ATGAGGGTGCTGCGACCTGGTGGACTTTATGTGTTTGTGGAACATGTAGCCGAGAAAGATGGAACATTTCTCAAATTTTT ACAGAGAGTTCTTGATCCACTGCAACAGACAGTTGCCGATGGGTGTCATCTTTCTAGGGAAACTGGAAACAATATATCCA GCGCTGGATTTTCTAATGTTGAGCTTGAGATGGCATACTTATCAAATGCTTCATTTGTAAACCCCCATATATATGGAATA GCTTACAAGTAG
Protein sequence (LotjaGi2g1v0301800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMNLRSLPATASFVSSTPKATNDATHNHKYLKLPKLINSGAPSKLTTEFLSPDSPDRTGTTITKPCFCGRRHFIEAATLG TTRFPIQPARASNLEPDSDYKVLLNKFHPPRPDWYEELYAWVLNSATKSYEAEVAKYKSQIFSNLKGKANRILEIGIGPG LNLSYYGSDPGVQVVGIDPNLKMEKYAQSSAESAGLPLSNFEFIQAVGESIPLSDASVDAVVGTLVLCSVKYVDLTLKEV MRVLRPGGLYVFVEHVAEKDGTFLKFLQRVLDPLQQTVADGCHLSRETGNNISSAGFSNVELEMAYLSNASFVNPHIYGI AYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
PANTHER | 87 | 323 | 237 | 3.5E-77 | – | |
Gene3D | 113 | 312 | 200 | 1.3E-28 | – | |
SUPERFAMILY | 118 | 306 | 189 | 5.69E-30 | ||
CDD | 151 | 253 | 103 | 5.14188E-13 | – | |
Pfam | 153 | 252 | 100 | 5.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0301800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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