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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0304400 |
Transcript ID | LotjaGi2g1v0304400.5 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G26850.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2; TrEMBL-Plants: tr|A0A1J7IVQ6|A0A1J7IVQ6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0304400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77796586..77797778) extracted from Lotus japonicus Gifu genome v1.2.
ATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAACTAATAGACTCCTGGATACTGGAAGGTATCGCAACATT ATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGGTCATGAATGTTGTGCCTAC TATAGCCGAGAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCATGATTGGTATGGCTTTCTAT CTTCTTCCTCCTATTTTATTAATGGCCTTTCTTGATCATATATTTCAATACATGTTTCTGAAAGTATAATGTGATGTAGA CATATAGTCTGCCAGTTAGTATATGCTATTGCTATCTTGTTTTGAATTATGACTAGGTGTACAATTTTTTTGTAATCAGG TTACTTCTTCCTCACATGTTTTTTCATTTATTTGTGTGTCCCTTTATGATCCAGGTGTGAAGCCTTCTCTACATATCCAA GAACATATGACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAGTAAGTATTCCTTGGTTATTTGATTATT CAATTATTCTTCCTATTACTTTAAATTTTTAATTCAATATCAATTCTTAATAGTTGTGGGCTTTCTTAGAGTGCAATTAT AGGTTATAGTTTAGCTGGTATAAAAATTGAGTATAAACAATTGCTGTCATGAATCCTTGCTTCATAGTTCTCTTGACTTG CTGATCTGTGTATGCTGCTCCATGTTCACTAAAATCTTATTCACCAATCAATTTTTGTTTGTGGACCCCTGAACAATCTT CTTGAAGAGCTACAGCTGAGTGACTCCTTGGAATTTGGATTTACTTTTAGCTAAGGATTCGTGGAACTACTTGGTTTTAG TTGGCTTTGTTTTCTTTTTCAATCGTATTTGTTCTTGTGTCTCAACTCTCAACTCTCAAGCCTTATGTAATGATGATGCA GATGTAACATAGAAGATATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGTGATATTCCGTGATGAAGTC GATGTGTTAATTAAGGTAAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTGACCATGAGGATGGTCCTCT TGTTCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACATCAACACATTAG
CDS sequence (LotjaGi2g1v0304400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGGTCATGAATGTTGTGCCTAC TATAGCCGAGAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCATGATTGGTGTGAAGCCTTCT CTACATATCCAAGAACATATGACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAATGTAACATAGAAGAT ATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGTGATATTCCGTGATGAAGTCGATGTGTTAATTAAGGT AAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTGACCATGAGGATGGTCCTCTTGTTCCTGAGAAGATAC TAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACATCAACACATTAG
Protein sequence (LotjaGi2g1v0304400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDMNAGLGSFAAAIQSSKLWVMNVVPTIAEKQTLGVIYQRGLIGIYHDWCEAFSTYPRTYDLIHSHSLFSLYNDKCNIED ILLEMDRILRPEGAVIFRDEVDVLIKVKQIVGGMRWDTKMVDHEDGPLVPEKILIAVKQYWVADSNATSTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 145 | 145 | 1.6E-89 | – | |
PANTHER | 1 | 145 | 145 | 1.6E-89 | ||
Pfam | 1 | 138 | 138 | 1.2E-66 | ||
SUPERFAMILY | 2 | 100 | 99 | 4.37E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0304400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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