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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0310400 |
| Transcript ID | LotjaGi2g1v0310400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Actin cross-linking protein; TAIR: AT1G27100.1 Actin cross-linking protein; Swiss-Prot: sp|Q9VWA8|FRG1_DROME Protein FRG1 homolog; TrEMBL-Plants: tr|G7K8C1|G7K8C1_MEDTR Actin cross-linking protein; Found in the gene: LotjaGi2g1v0310400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78469559..78475394) extracted from Lotus japonicus Gifu genome v1.2.
TAAAACTAACCATTCACTTCTTGTCTTGGCAATTATATTAACCCTTTTCGCCAAAGGTTGCTTAATGATATACACTTGAT TTTAGTCACAACTCCTATGAACGCGTGATTGATTTCATAAATACTCTGATTAATTAGTGATTAAGCTTCATCATCAAGTG TTAATTAATGGAGTTTTTCGGAAAAACCAAGGTAGTGAAGCTTCGGAGCCACATGAACAAGTACCTGGTGGCCGACGAAG ACGGCGAGAAGGTCCACCAGAGCAGGAGCGGCTCCGGGAGGAGAGCAGCATGGACTGTGGAGCCAGTGAAGAACAACCAC CGCGTGAGGTTCAAGAGCTGCCACGGGAAGTACTTAACCGCGACGGAGACGCCGTTTCTGTTGGGGATGACGGGGAAGAT GGTGAAACAAACGGAAGGGGGTGTGGATGGGAAGGAAGAGTGGGAACCGATACGGGATGGGTTTGAGGTGAAGCTGAGGA GCTGGTGCGGGAAGTTTCTGAGGGGGAACGGTGGCACGCCGCCGTGGAGGAACACGGTGACGCATGATGAACCACATAGC TCCGCCACGAGGGATTGGGTTCTGTGGGAGGTTGAGGCGGTGGAGGAGGATGAGAATTCGATTGTGGATGAGTTTCCTGA GAGTGTGTTGTCCTCTTTTGCTAATTCTGATGATCTCTCCGTCGCTGGTTCTGATGAACCGTCGTCGCCGATGTCCGTTT TCAGTCTCACTTCTCCGACGCCGGTGCGAAATTTTCAGGTGAGTCTTCCTCTGTTTTTTCCATTGCTTTTCCCCTGTTCT CGTTCATTCACACAAAACCTACTCTCTATCTCTTTTTACCTAGATTTTCTATCGCATTAACTATCACATATTTAGTTTCA AAAAAAATAACTATCATATATTTATATTTTATTATTTTCTTTTCTGTTCATATCTCTAGTGTAAAAAGAGGTCAATTAAC AATTGAATTTTCCTTGTTGGTTGAAAAATATGGTTTTTATAACTATTTATTACTTTACATTTCATTAATTTAATGTAGAT TTCAGTTCACACTTCACATAGTGGTTGCACGCGGAAAGAAGTTCTTATATTATATATTAATGTGAGGGTGTTGCTCCGGT ACCCATTAAAATTAAAAATAAGAGGGTATAATACATTTTAGTTCATTTTTTACCATACAAATGACGTATTTATAAATTTT GAAAAGTTTACTATGGAGAAAACATAACTAAAAAGTATGGAACCCTCCACTTTTGAAAGGGTACCAAAGAAATTAAAGGG TACCAAAGAAATTGCCTGACTCTTATTGTTTTGGTTTTCGGGAAAAGTCTACATAATAACTTTGAATTTTATGCCTTTTA GTTTACATTTGAATTTCTATTTTCTTCGCAATTATTATTAACAGTAAATAAATCCTCAAAACTATTTTTTTAAATAAAAT AAATATAAATCAATTGTACGTGGATATGTAGGTCAGAATATGTTCCTTTATAAATCCTTAAATTTATGATTTTTAGGTAT GCAAGAAAGGTTTTGGTTAAGGTCCTTATAGTTATAAGTATAAGGAGGGTTTAATTTTAATTATATGAAGGTTTTAGAGT AGAATGATAGGAAGAAATTCCTATGAAAAAGGTTCAGCTAAGAACTAATAATAAGAAGAAAGCTATTAAAATATAAGGAA GAAACAAAATGAGTTATGATACATCCACATCTCTCACCTTTTTTTCACCTTTATTTTCTATCTATTTCTCTCTTCTCTAT CAATCAAATCACTTATCACATCTTTACTTTCTCTATCTTTTCTTCTTATCTCTCTCTCATTCTCCACCTCTTTCCACCTC TACTTTGAGGTGTGAACTAAACATTATTCAAACCTTATTCAAATACTCCAAATAAAACTAACACATTAGGTGTTCTTGTC TAAGAACAAGAGAATTTTAAGGAAACTCTAACAGACATATAGTAAAGGAAATAAGTAGCATGTAATAAATGAATTAGTCC TTTTACAATATATGACCTTCCCTTTTATAGTCGGGTGATCCAAAACCCTAATTCTAAGCCTAAATTGACCCTGGCGCCTC ATAAATCATCGGCCTAAGAGTCCTTACAAGAGACACAATCCAAGTCTGATTACTAGGGGCATGACCTAACCACTTCACAA GGGTTAGATCGCCATAACCTAGCTAAAGATGTGACAAGTCGCTCTTTTGGGGTTCGAAGGAGGTCTCGCCCTGCCTTTAT GTAGTCACGTCAAGCTCTGATTTTGGGCGGGTTCTATCATGACAATTCTCCTCCTTCCCATAAGCCCACAAAACACCGCG CCCAAAGCATGAGAGTAAAATGTGTGTCAATCATCTTGATTTGCCTTTGCCTTCTAATCTCCTCTGAAGACGTGTTCTAT CATAGGAGGTCCCGCCAAGTCCAGTGTTCACAAGCCAGTATTTCCTAGCCACTTGAAGGTCACGAGATTCCACTTCCAAT TGATTACCACTTTGTTGGATTTCAGATGCTATCTATGTTGATTGACCAAAAATAAATTAAAAGAGAATGCTATATGTTGC TCCATGCCTTCACCAACTCTTCTCCACTAACGAAAATGTGATCACACTCTTTGCACTAAACGCACTATATACATAAAAGA TTGATGACACAAAAGTGGTTGATATCAAGAGCTTGTTTTAGAAGATAATCGTGCATCTTTTATTCCCACAAGTAATTAAT ATTCATGTCTACTCGTGTCTTGTGCATTTTATATGAAAAGTTCTTGATGCATATAGCGTTTCCCTGTCCAAGCTATATTT GATGTAGAGAATGGAGAATATAGCTAACAATAACACATCATTACATTTTTCTAAAATGAAAATGATTCTTACAAAAGTGT CTATTTGTGGAAAACATCTTGTGTAGACGTTAGTTTCATCCTTTTTGGTGGGCATTTGTCGCAATGCGAATCACCCACCA TATTCCACAGCTTCCACCTCACATATTGTTTATTTTCCTTCTTTGTATGGGTCTCTATTCCTTTATGCTTTTTTTATTGA ATTTTGAATTTTCTATTTCTGTGTATTTTACTTATTTCTAGATGGCTAGATTCAACCTTTATTCTCTTTAATTTCTTTGC TATCCTCCAACACGCACCATTTTATGAAACTTCCATTAGATCCCAGCACATATAATAGCATATCCGATACTCATACTTAA TTGACTAGTCCTGAATCTTTATGTATTGAATTAGGCTGACTCAGCAATTCTTATCCAACTTCCACAGTAGGAAAATGATA TGGATTAAGCTATTTAATTCAATCAAATAATAACTGCATGTTTAGAAAACGTTTATGTTCAGAACGCGGAATCAATTCTG TTACAAAATTTCTTTGAGTAGTTTTTGAGTTTTAAAATTGATTCCAATAAAACATAAACCGATTCAAACATGCTATAAAA GTCTAAAATCAATTTGGAAATTTTCAATTAATATAATAGTAATTCTTGCTGAGAATTTGAGTAAGAAATAATCAAATAAT TTGTTTTACATTTCCGGAATATTTCTAATACTTTTCAACTCATAATTGCCAACAATTCTACCTTTACCTCCTCTTCTTCA AACAGTCTAGATCCTTGATGGCGGCCACACACCACACGCAAGTCTAAGTAGAAGTGATTATATTAGATTAAGTCTAAGTA GTAATTAGATAATTGAGATTCTTAATCACTTAATTTAGAATAATTCTTTTTTGGTACATCGAAAAGATAAATTGTACCCG CCAAGAATTGATCCCTGGACCTCCCCCTACCCAACTCATACGTCTCTTGCTCATACCACTTAAGCTATCATACGGGGACT AATTTAATTCTTGAGCGGTGTGCATGTATAATAATTTGTTGAGAAACATATACTCACCTAATGTAATTTCCGAGTTTTAA GCGGATTAGTCTCGTTCCTGCCTACAACTCCCAAACAGAGGATACAAAAGTGACCGGTTTGTCCACGCAATGCCCGCGTG CACTCAAACGTGTTGCCAGTTGCCACTGCTGACTGCTGTTCTATATTTCACAGTGCACACCAAACCTTTTCAACCTCACC AGTTCCAATCATAATCCCACTAATATATAAATACACCCCTCAAATCCCTTTCATTCAATATCCACCTTAATAATTCTTTC ATTTTTTCCCTGAAATCAAAACCAAACTCTCAACAATTCAACTAACCACCCTCCCCTGTTCTGTTCTGTTTCTAAACAAA TATTCATCACATTCACATTCATTCACATATATGCAGGCAGTGAGCTCCAACAAATTCAGAACAGGCATGGACTTCTTCCA CTTCGCCAAGGCGGTGCGCCTCCGCAGCAACCACGACAAATACCTCCTCGCCGAGGAAGATGAAGAATCCGTCACACAAG ACCGAAACGGCTCCTCCAAGTCCGCCAGCTGGCTCGTCGAGTACGTCCCTGAATACGGCAACATCATCCGCCTCAAAAGC TGCTACGGCAAATACCTCACCGCCTCCGACCACCCCTTCCTCCTCGGCATGACCGGCCGCAAGGTGCTCCAGACACTTCC CTCCTCCACGCTTGACTCCGCCGTGGAATGGGAACCCATCAGGGACGGTGGTCGTGTCAAGCTGAAGACCCGCTACGGCA ACTTTCTCAGAGCGAATGGCGGCCTTCCGCCGTGGAGGAACACCGTCACTCATGATATCCCCCACCGGACCGCCACGCAG GATTGGATCTTGTGGGATGTTGATATCGTCGAGATTCATGTTAAACAACAACAACAACCTTCTGCTCCACCCCTCTCTGT TCCGGACTCTGTTCCCACAAAGCCTGTGGCGGCTCCCACCATATCTGCTAGCTTTTCACGGCAACAGGTATAAACTTCTT GGAAAAGTTTGCAAGTTTTTATCTGGGTTGCTTTGAGCCTTTGAATATGGTTAAATTTTGACTATTTTTTGGAAATTTGT TTCCTGATTGAGTTTGGTTCTGTTTTGCAGTCGAATGATAGTGTTGGTTATTCACCGAAGAAGACGACGGAGGGGCGAAC TATATACTACCATGTTGCTGAAGATGATGGAGAGGTGAGTGATGAAGGTGTACAAGGGTATTCTTTGATTTTCAAAGGGA ATGGAGTTGAAGAATTGAAGAGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAGTGATTGTGTGTAATCGGAGTCCTTTG AGTGGGAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCCAACAATGTCACCATGCATGTTGTTCTGGTTCTTCCTTTCTC TAAAGGTGAGTTCTGATTCCCATTTGACTGTTTGCATTGCTTATTAGACATCATTTGCTTTTGTTCTGTGTTGTTTCATC ATTTGTACGTGCTAGTTTGTGACCTTAACATTTGCCTTCTTTTCTGGTGTTTCAGTGGCAAGAGATTTTGAGGCACAAGG TTTCATATGATCAGAAGAAGCTTAGATTTTTGGAACACAAGGCTCTATGTACATACTGATCCATCCATTGCATTTGTTAA GCAGAATTCATCAAGGTCCTATGGGAATCATGGCAGCAATAATCATTCATTGATTACATCCAATGTATTATATTATAGGG GGCTAATACTTCCAATGTTGGATTTTGTTAAGGCATCTTCTACAGTCACACTACCTATAATATTAGCTGTCTTTCATGTG GATTCTGGAATTTTGTTGTTTCATGATTTTGTAATTTTCTGTGCTTCATTATTTTTCTCCAGACTATAATGATTAGTGAG GCATGTGCATATAAATTTTGTTAGGCAGATTTGTTATCAGAGATAAAATTTCTATTATTCATCAGAAATATTACCA
CDS sequence (LotjaGi2g1v0310400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTTTCGGAAAAACCAAGGTAGTGAAGCTTCGGAGCCACATGAACAAGTACCTGGTGGCCGACGAAGACGGCGA GAAGGTCCACCAGAGCAGGAGCGGCTCCGGGAGGAGAGCAGCATGGACTGTGGAGCCAGTGAAGAACAACCACCGCGTGA GGTTCAAGAGCTGCCACGGGAAGTACTTAACCGCGACGGAGACGCCGTTTCTGTTGGGGATGACGGGGAAGATGGTGAAA CAAACGGAAGGGGGTGTGGATGGGAAGGAAGAGTGGGAACCGATACGGGATGGGTTTGAGGTGAAGCTGAGGAGCTGGTG CGGGAAGTTTCTGAGGGGGAACGGTGGCACGCCGCCGTGGAGGAACACGGTGACGCATGATGAACCACATAGCTCCGCCA CGAGGGATTGGGTTCTGTGGGAGGTTGAGGCGGTGGAGGAGGATGAGAATTCGATTGTGGATGAGTTTCCTGAGAGTGTG TTGTCCTCTTTTGCTAATTCTGATGATCTCTCCGTCGCTGGTTCTGATGAACCGTCGTCGCCGATGTCCGTTTTCAGTCT CACTTCTCCGACGCCGGTGCGAAATTTTCAGTCGAATGATAGTGTTGGTTATTCACCGAAGAAGACGACGGAGGGGCGAA CTATATACTACCATGTTGCTGAAGATGATGGAGAGGTGAGTGATGAAGGTGTACAAGGGTATTCTTTGATTTTCAAAGGG AATGGAGTTGAAGAATTGAAGAGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAGTGATTGTGTGTAATCGGAGTCCTTT GAGTGGGAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCCAACAATGTCACCATGCATGTTGTTCTGGTTCTTCCTTTCT CTAAAGTGGCAAGAGATTTTGAGGCACAAGGTTTCATATGA
Protein sequence (LotjaGi2g1v0310400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFFGKTKVVKLRSHMNKYLVADEDGEKVHQSRSGSGRRAAWTVEPVKNNHRVRFKSCHGKYLTATETPFLLGMTGKMVK QTEGGVDGKEEWEPIRDGFEVKLRSWCGKFLRGNGGTPPWRNTVTHDEPHSSATRDWVLWEVEAVEEDENSIVDEFPESV LSSFANSDDLSVAGSDEPSSPMSVFSLTSPTPVRNFQSNDSVGYSPKKTTEGRTIYYHVAEDDGEVSDEGVQGYSLIFKG NGVEELKRKFEEETGLEGVIVCNRSPLSGKLYPLRLQLPPNNVTMHVVLVLPFSKVARDFEAQGFI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 295 | 295 | 2.9E-109 | – | |
| PANTHER | 1 | 295 | 295 | 2.9E-109 | – | |
| Pfam | 1 | 140 | 140 | 4.3E-61 | ||
| Gene3D | 6 | 142 | 137 | 2.2E-18 | – | |
| SUPERFAMILY | 8 | 144 | 137 | 1.09E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0310400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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