Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0314200 |
| Transcript ID | LotjaGi2g1v0314200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT1G24120.1 ARG1-like 1; Swiss-Prot: sp|Q8VXV4|DNJ16_ARATH Chaperone protein dnaJ 16; TrEMBL-Plants: tr|A0A0B2SEZ8|A0A0B2SEZ8_GLYSO Chaperone protein dnaJ 16; Found in the gene: LotjaGi2g1v0314200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78937213..78940015) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTAAAGAGGTTACCTTTTCATATAATATCTTGTCAGATCCAGATAAACGGCGTCAGTATGACTCAGCTGGCTTTGA GGTGATATAAGTTAATATTTTGAACCATTAAGACTTTAGGAGGGTCATCAATCCTCCAGGTTTTCATTTTTCATTGCTAT TAAGAGATTCCAATTTTATAAATTGTATCAATTTCTTTTTCCAAACTTGTTTTTTTCAAATGAAAAGTTATCTTGGACGA CTTCATAATGAATAATTAGTGATGAAATATTTCATGCTTACCTGTAGGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTG GATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGGTAAGAAGGCTGGACGTGCTTATCTTCCTG TTCACTTCTAAGTCCTTTTTTGTTGTTGAGTTCTTAATTTATATATTTGAATTCTTCCCTTCTCTTTTCTGGGTTTCCCT CCTTTCAATCATTAACTTTCTCAATACATGACAGCAAACTGGGTGTGCCAATTAAGACAACAGTATCTGCAACTGTTCTT GAAGAGGCACTCAATGGTTCAGTGACCATTCGTCCACTTCCATTGGGACAATTTATATCTAAAAGGGTGAGTTTTTTTTT TACTTGAATTCATTGATCCTGTTTTAGTCACAATTCGCTATTGTTTATTTTTGTTTTGGTGCATTCATATGACAGGTTGA GAAACAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCCCGAGCTGGATTTGTTTGTCGAGTGCAATCAT CAGAGAAAAGCAAGTTCAAGGTTTGAATTTAATTCTCTGGCATTGATATCTGAAAAAATTGCATGCAAGATATGCTCTAC TGATTAATTTTTTTTACCTTGGTTTATGCCTTTATGGAGATTGATTCCTTTACAGAATTGTGTAAAAGTATATGATTTCC TTGAAAATAGATTGATTCTTTCACAGAATTGTATAAAATATAAGATTTCCTGGAAAGTTGGCATTTCTTCAAGAATAATG AGTTGGAACTCTTAGTCAAATTATAGAGCATTTTGAATTTACTGGGAAGTCCATCATTAGGTTATATATCTCCTTCCTTT TAGAGATTAACAGAGGGTAATATTTTTCATGCTTAATGTAGCAGACTTGCTGATAAATCCTTTAGGTGGGATGTCTATTC ACTGACATCCAGTCCCCAAGTTTAAGCAGCTTCAAATATCCCATATATGTTTGAAACTATTAATATTAGGAAGATAATTC ATCACTTTTCGTGCTCTTCTGTATGTACTGATTTCCTATATGCTGGATCTCATTTGTAGGGAGCTTTGAACTTAGACTTT TGTGAGAGTAATTCTATATTTTACTTCACTACAAAATAGTGATGAACTATCCATTGATTCTGTAATTTATGTGTGCACTG TTTTTGTAGTTTCAGACTTTTTTTTCTCGCACAATGTAAAACATTGATTTGCACATTTAAACTATTGTTTTACTTTGCTT CATATATAATTTTTAATTATTTTGAAAGTATTAATCTGTTAGGTTTTGAGATGATCTTATTTTAATGGTGTAAATTAATT TTATTTCTACAGTTATTATATTTTGATCGGGAAGACAAAGGTGGCTTAAGTCTTGCACTCCAGGTATTAGACATTTTCTC ATGTGTGAACATAATATGTTTATTGTTATTATCAATTATTTCTGATGCAATGTATAGTTATTGGATCTTGGATATTAGTC ATTCTCTGGTAATTCTTGTATAATTTTTGTGCATCTCAGATCTGAGCATACTATGGTGTTACTAATTATGGTTGTAGGAA GACTGTGCTAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTACTGTTTATCGGTTGGATCAGACAAT GAACTCTGTGAGTTGCTATACTCTAAATGGATAATTTTCACTTTAAATTTATACTGTCATCATTTTCATTTGGTTCTTCC AATATTTTTCTACAGATAGCTGCTGCCAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAGCCATGTGA ATTGACAGAATTGAAGGCCGGTACCCATGTGTTTGCCGTTTATGGTAAATGCACATTTTTATTCGCTATGAATTAGTGAT GCTGTTTATGTTTGTTGACTGCAACTATGCTCTATATAATTTGACTATTACATACTGTTGAATTTCTTCTAGGTGACAAC TTTTTCAAAAGTGCAAATTATACAATAGAAGCCCTGTGTGCTGCACCGTTTCGTGAAGAAAAAGAAAATTTAAGAACCAT TGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCGAAGTTTGAGGCCGAATATCGCGAGGTGTGTGCTTTGGGACTAG CATTCCATATGTTTCTAATTACATCTCTCAATCAAATCTAACACTGGGTCTTTTGTAGGTTCTGGCACAATTCACGGAGA TGACAAGTAGATATGCACATGAAATGCAAGCAGTGAGTTATTCTTTTCCAAGGGTTTCTATGTGGGCGGAGAGGCAGTGA CTGAACTGAAGCTATTTATTCTTTGTGCAGATTGATGAGCTATTGAAACAAAGAAATGAAATACATGCATCATACACTGT TGCTCCTTTAAAACGAAGTACGAGTAAGAGCAGACCCAAACGTTCTTCGAAGGAGGCAAATGAAGATGGCCAAGCAAGGG AGAAGAGGAGCTCAAGAGATCGATCAAAGAAGAAGAAGTGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGCTTGC TAA
CDS sequence (LotjaGi2g1v0314200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTAAAGAGGTTACCTTTTCATATAATATCTTGTCAGATCCAGATAAACGGCGTCAGTATGACTCAGCTGGCTTTGA GGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTT TTAGCAAACTGGGTGTGCCAATTAAGACAACAGTATCTGCAACTGTTCTTGAAGAGGCACTCAATGGTTCAGTGACCATT CGTCCACTTCCATTGGGACAATTTATATCTAAAAGGGTTGAGAAACAATGTGCACACTTCTATTCAGTTACAATAACAGA AGAGGAAGCCCGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGAGAAAAGCAAGTTCAAGTTATTATATTTTGATCGGG AAGACAAAGGTGGCTTAAGTCTTGCACTCCAGGAAGACTGTGCTAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTT CTTGGGTTTACTGTTTATCGGTTGGATCAGACAATGAACTCTATAGCTGCTGCCAAGGATCCAGATACATCATTTTTCAG AAAGCTGGATGGGTTCCAGCCATGTGAATTGACAGAATTGAAGGCCGGTACCCATGTGTTTGCCGTTTATGGTGACAACT TTTTCAAAAGTGCAAATTATACAATAGAAGCCCTGTGTGCTGCACCGTTTCGTGAAGAAAAAGAAAATTTAAGAACCATT GAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCGAAGTTTGAGGCCGAATATCGCGAGGTTCTGGCACAATTCACGGA GATGACAAGTAGATATGCACATGAAATGCAAGCAATTGATGAGCTATTGAAACAAAGAAATGAAATACATGCATCATACA CTGTTGCTCCTTTAAAACGAAGTACGAGTAAGAGCAGACCCAAACGTTCTTCGAAGGAGGCAAATGAAGATGGCCAAGCA AGGGAGAAGAGGAGCTCAAGAGATCGATCAAAGAAGAAGAAGTGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGC TTGCTAA
Protein sequence (LotjaGi2g1v0314200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFKEVTFSYNILSDPDKRRQYDSAGFEAVESENQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGSVTI RPLPLGQFISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSEKSKFKLLYFDREDKGGLSLALQEDCAKTGKVTSAGMYF LGFTVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFREEKENLRTI EAQILSKRAEISKFEAEYREVLAQFTEMTSRYAHEMQAIDELLKQRNEIHASYTVAPLKRSTSKSRPKRSSKEANEDGQA REKRSSRDRSKKKKWYNLHLRVDKRKAC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 348 | 348 | 3.1E-196 | – | |
| PANTHER | 1 | 348 | 348 | 3.1E-196 | – | |
| Gene3D | 1 | 63 | 63 | 6.1E-6 | ||
| SUPERFAMILY | 1 | 29 | 29 | 1.64E-5 | ||
| ProSitePatterns | 2 | 21 | 20 | - | ||
| Coils | 237 | 257 | 21 | - | – | |
| MobiDBLite | 294 | 336 | 43 | - | – | |
| MobiDBLite | 307 | 325 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0314200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…