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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0314600 |
| Transcript ID | LotjaGi2g1v0314600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K2V1|G7K2V1_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi2g1v0314600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78992298..78997150) extracted from Lotus japonicus Gifu genome v1.2.
ACAGCATATCTCAACCGCAGAACCTCTTGCATTTTAACATAGGGAGTAAAAACTTGGAAGATGGCTGAGGCTGTGCTTGA AGTTGTGCTTGAGAATTTGAGCTCACTCATTCGGAAGGAGCTTGGCCTATTTCTGGGTTTCAGTGAAGACTTGAAAAGGC TGTCCAGCACACTCTCTGCAATCAAGGCAACACTTGAAGATGCTGAGGAGAAACAATTCATTGATAGAGCTATTAAGGAT TGGCTGCAAAAGCTGAAAGATGCTGCTTACGTTCTCGATGACATCTTGGACGAGTGTGCAACCGAAGCAATGGAGATGGA GAATGGAGGATTTTTGTGTGGTTTATCAGACAAGGTACAAAGCTCTTGCTTATCCTCTTTTCATCCCAAGCATGTCGTTT TCTGTCATAATATTGCTAAGAAAATGAAGAGGATAAGGGAGAGGTTAGATGAAATTGCTAAAGAAAGGAGTAGGTTTCAT TTAACTGAGATAGTTACAGAAAGAAGAGATGACTGGCGCCAAACCACCTCAATCATCAATCAACTTCAAATCTATGGAAG AGATGAAGATACGGATAAAATTGTAGACTTTTTGGTTGGTGATGCTTCTGGTTTTGAGGATTTAACAGTATATCCAATAC TAGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAGCTTATCTTCAATCATGAGAGGGTAGTCAACCACTTTGAACAA AGAATTTGGGTGTGTGTTTCCGAAGATTTCAGTTTGAAAAGAATGGCAAAATCTATCATAGAATCAGCAACCGGGCATCC CTGTGCAGATCTAGATCTAGACCCGCTGCAGCGGAAACTTATGGATTTACTGCAAAGAAAAAGATATTTGCTTGTTTTGG ATGACGTGTGGGACGATGAACAAGAGAATTGGCAGAGGTTGAAATCTGTACTGAAATGTGGAGGAAAGGGTGCTTCAATT TTGGTCACTACTCGTCTCCCAAAAGTTGCAGTAATCATGGGAACAATGCCTCCTCATGAATTATCAATGTTATCTGATAA TGATTGCTGGGAATTGTTTAAACTACGAGCATTTGGATCAAATGAGGTAGAGAGGGCAGAGCTTGTGGTCATCGGGAAGG AGATAGTAAAGAAGTGTGGCGGAGTGCCTCTTGCAGCAATAGCACTAGGAAGTTTGTTGCGCTTTAAAAGAGAGGAAAAA GAATGGTTCTATGTCAAGGAAAGCAAACTGTGGAGTTTACAAGGTGAGAATGCTGTCATGCCTGCCTTGAGACTTGGTTA CTTGAACTTGCCTGTAAAATTGAGACAATGTTTTGCATTCTGTGCATTATTTCCTAAAGATGAAAGATTAAGCAAACAAT TTCTAATCCATCTTTGGATTGCTAATGGCTTGATTTCTTCCAATGAAAGGTTGGATGTTGAAGATGTCGGAGATGAGTTG TGGAATGAATTGTATTGGAGATCATTTTTCCAAGATATTCAGACAGATAAGTTTGGCAAAATTACATGTTTTAAGATGCA TGATCTGGTTCATGATCTTGCTCAATCTGTCGCTGAGGAAGTCTTTTGCAGTGCAGATAATAATGATATAAATGATGTGT CTGAAAGAATCCTCCACCTCTCAATTTATGGCAATTCAATCCAGTTGCACCGATTCAAATCTTTGAAAACCTGCACAATG GGGAAACATTGTTATTATCCTAGGCAACTTTTACCAAAGATATTGAAATGCCAGTCGTTGCGGGTGCTTGAGTGCAGACG ACTAGTAAGTTTGTCAACTTCAATTGGTCATTTAAAATATATAAGATACTTAGATATTTCTTATGGCAGCTTCAGAACTC TTCCAGAATCCCTTTGTAGCCTGTGGAATTTGCAGATATTGAAATTGGACTACTGTCGTAGTCTACAAGAGTTGCCAAAT AATTTGGTGCGCTTAAAATCTCTTCAACATCTATCCTTGACGCATTGCACCTCATTATGGAGCTTGCCTTATCGGATGGG GCTGTTGACTTGTCTTAGGACTTTAAGCATGTATTTTGTTGGCAATGAAAAAGGGTTCCATTTGGCAGAACTAGGACAAC TGAACCTTAAAGGAGAGCTTCACATTAAGCACCTAGAGCGCGTGAAAGGCATAATGGATGCCAAAGAAGCCAACATGTCT AGTAAGCACCTGAACCATTTGCAGCTGTCATGGGGGAGAAATGAAGAGTCCCAATCACAAGAAAATGTTGAGCAGATTCT TGATTTGCTTCAACCTCATACACAACAACTTCAAACTCTACTTGTGGAAGGATATAGAGGTGCATGTTTCCCACAATGGA TGTCCAGTCCTTCCCTCAGATACTTAAATTATTTAATACTCTTGGATTGCAAATGCTGTTTATACCTTCCGCAGCTGGGG AAACTACCTTCTCTGAAGTATCTAAGTATATCTAACACGAGTAAAGTAATATACTTATACGAGGAGCCATGTGATGTTGG AGTTGCAGGAATTTTCATAGCTCTGGAATCTCTGAAGCTGAATGAGATGTCAAACCTGATAAGGTTATCAAGGGAGGATG GCGAGAACATGTTCCCGCGCCTTTCAAAACTTCAAATTATTGGATGTCCAAATTTGTTGGGCTTGCCTCGCCTTCCATCT CTCAATCGGCTAAAGATACAGGGGAAATGCAACACAGATTTACTAAGTTCAATTCTTAAATTCCGTAGTCTTGAACACCT ATACTTGGGATGGAATGAAGAGCTAACTTGCTTTCCAAATGGGATGCTAAGTAACCTTCCTTCTCTGAAGATACTGGACA TTTGTAGGTACTCCAAACTTGAGGAGCTACCCCCAAATGAAATTGCTAACCTTGATGCTCTTCACCATCTGGATATATAC CGTTGCGACAGCCTCAAGTCATTAACAAATGAAGTGTTGCGAGGGTTGCAGTCTCTCAAGAAATTATTTATTGCTGGTTG CCCTGAGTTCAATCTGTCTTCAGGTTTTCAATACCTAACTTGCCTTGAGAGTTTGGAGATTCGTGGTATCTCAGAAATGA GGGGTTTACATGAGGCTTTACAACATATGACTACCCTGGAATCTTTAACATTGTCTGATCTTCCAAACTTAGATTCCCTA CCTGCCTCCTTGGAAAATCTTGGCGCGCTTCGGTCATTAATCATTTCTGAGTGTCCTAAGTTAAGGTGTCTTCCAATGAG CATTCAATGCCTTAGCTGCCTGGAACAGCTGAGTATTATCGGTTGCAAAGAGTTAGGCAAGCGATGTGACAAGGAAGCTG GCGAGGATTGGCCAAAAATAGCTCACATTCAACGTGTTGAAATACAAACCTAGGGAGTGCGCTTCAGCATAGGACACTGC AGGTTTATTCTTATCTCTCTCTCATCATAAAATCAAGGGAACACACAAATTTTATTTAGAAAAATATTAAAAATTACGAT CCAAAACACAAGAGTTGGTAGTTATCCCCTACTACCCTCCACAATTGGTAGTCATTAACTTTATCATATCAGCATTTCTT GCAATTGAGCTAGTGCAAGATTGAAAGAGGGTTGTCATATAAATTGAAGCTTACTAACTCTAGGAACTGTTATCTGCAAA CTTAGGCTAGCTTCTGAATATTGGTTCAATTGTTGTAGCATCCGTACATGCTCACTAATGCTTAACCAGAATTTTTAGTT CCCTTGCTGTGGAGTGAAAAGCAGAATGTTTGCTTCACAGAAATTGAGGTTTGGTTAAGTATAAAAGAGCACAGAGACAC AATCTGGACTCAGAGATGTAATAATATTGTTCACTTATATAACCATGTGGCTCTCTAAAGCTACATGAGATTACCATTCT TATAGTGGCTTTTGGTAACCACTTTATTAGCTTCTTCAGATATGAAATTGTGAATTATGGTTTAGTGGTCTTTCTAATTG TGAGTTGAATTGTGGGCATAATATTTCTTTCATTTTTATCTAAAACTAATGAATTTGTTTGCAGCAAGGGAAGAAATGGA CATATTCCTTTTAGAGATTCAAAGCTAACCCGGACATGCAGTCATCATTAGGAGGCAATGCTAGAATTGCAGTCATCTGT ACCATGAGCCATGCACGGAGCCATGTTGAGCAATCAGAAACACCCTCTTATTAGTGAATGTAGTGGTGTCTGATAAATCA CTAGTCCAGAAATTTCAGCAAATCCAATCAATTATCAAATCACAGCTCTCCACTTCTGTTCTCTCTTCAGCTTTGTAGAT ATATGCAACTAGATATTTTTGGTGTATATCTCTCAACCATTTTGCGTTAAAAGGATGCTGAAGCTTTTGTGATATCTCCT CTAAAGAAATTTTATTAGTGTAAAAAGTTTACAACCTTTTCCTTTCACTATTATATGGCATTCCATGACTCAGTACACCT ATCCTTAGGAACATTTTCCATGTAAAAACTCATTGTTTTTATCCCACCCCTTATTATTTATTCAACAAATGCCATGTCAG AATTGATTTAAAATCGACTTTACGAAACATGCTTTCTTTGTATATTTTCTGAGACTACTTTGCTAACCATTATTAAGAAA ATTATCTCATCTCCTATTGAAAGTAGAAATAAATAATCTCCAACATAACCTTGGTGGTGTTTGTAAGGTTAGAGATTGAC ATTTAAGTAATTTAAAAGGGTCTCCATCCAGAACTGATATCGTTTTTTCCAAGGTTCAGCACTGATATGTGTTGTACTTG TACTTGTCAGGCTAACACAAACCATTCCCATATTTAGAGATTTCTTTCATGTGGTTCAAGCCAAGGAAAGCCCAGGAAAT CAAAAACCTCCTTTTCCGTATCAAATTTCAAACTTGCACTACCTTTTGCACCC
CDS sequence (LotjaGi2g1v0314600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGCTGTGCTTGAAGTTGTGCTTGAGAATTTGAGCTCACTCATTCGGAAGGAGCTTGGCCTATTTCTGGGTTT CAGTGAAGACTTGAAAAGGCTGTCCAGCACACTCTCTGCAATCAAGGCAACACTTGAAGATGCTGAGGAGAAACAATTCA TTGATAGAGCTATTAAGGATTGGCTGCAAAAGCTGAAAGATGCTGCTTACGTTCTCGATGACATCTTGGACGAGTGTGCA ACCGAAGCAATGGAGATGGAGAATGGAGGATTTTTGTGTGGTTTATCAGACAAGCAAGGGAAGAAATGGACATATTCCTT TTAG
Protein sequence (LotjaGi2g1v0314600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAVLEVVLENLSSLIRKELGLFLGFSEDLKRLSSTLSAIKATLEDAEEKQFIDRAIKDWLQKLKDAAYVLDDILDECA TEAMEMENGGFLCGLSDKQGKKWTYSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 83 | 82 | 6.1E-14 | – | |
| PANTHER | 2 | 83 | 82 | 6.1E-14 | – | |
| CDD | 2 | 83 | 82 | 6.6144E-14 | ||
| Pfam | 5 | 87 | 83 | 1.9E-24 | ||
| Coils | 31 | 51 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0314600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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