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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0330100 |
| Transcript ID | LotjaGi2g1v0330100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Agamous MADS-box transcription factor; TAIR: AT4G37940.1 AGAMOUS-like 21; Swiss-Prot: sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27; TrEMBL-Plants: tr|A9YWS1|A9YWS1_MEDTR MADS-box protein; Found in the gene: LotjaGi2g1v0330100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80575341..80588269) extracted from Lotus japonicus Gifu genome v1.2.
GGCTTCTCATGTGTGTCTGTGTGTGCCTTATCACTTAATATAGATAGTATTGAATACAATTTAATTATATGAGTTTTATT GTTAAGGCGTGTTTGTTTGAGATAGACTTATCAAATGTAATGTTATGAATTAGTTTACCAAAGTGGACGCAAGGAGATCC GCCAAGAGCGACTGCACAGGTACGATTGATATGTTGACCTGATTTGCGAGCTTTACTTTCCTTAACAAATTATGAATCTT AATTTATATGATTTTTATTTTGTTAGATTGTATCTTTATCTTATGAATCGGTTTGTCAAAGTGGAATGAATGATACAACC TTGTCAACAGAATGAGCTCTAAATGATTTGATTGTGGAAATATCGACGCTACATAAAACTTGACGACACATAGTATATAT ATGGAACTCAAAGCATACACATAAAGAACAGTGGAACTGGTTAACGATGTGTTGCTCATTTAATGTCTTATAGCTCGAGA TTATATCATTAATTTGTATGCAAAAGGAGAAGCACTATATATATAGGAATTATATGCAAAAGTATCATATTTATACAGTC AAAATATTATAAGCATGTTGATTATAAGATGACTTTTAGTATGAAGAATGAACCAATAAGATTGAAAAGCATATCTAAAT AGTTTAGATATATAACAATAGAGAGCAAACACTTTTCAAAATGGTTTCAAATATAATGCATTTGCGCGAAATACATACTT TGACAAAAAATTATAGATGTAAAGATTTGTGTGCTCTAAAAATGCATATGTAACTATTTTGAGAGTCTTTTCCCTAATAA CATACATGTAGACCATTTCGATAAGTTTTTCAATATATGAGTTTCACATTATGATGTACGTTTATTTCATTTTATTTACA AATTTAGTGTCGGCCTAGTAGACGCTATGTAGCGTCGGCTGAGCCCACTCAACTGTCAATTAAGGCAAACTCTACACACT TGTATTAATTTGTGTAGATTGTGACCAACTCTAATTAGTCTTAGGATGTCGGGCCCATTGGCCCAAAGTTTGGCGTCGGA TGAGCTAACGTTGATTTTGAGTAAAGGGTAAAACATCATCTTCACCTTCATTCCTCCACTCTCAAAGCCTTCTCCCACTG TGAACCCTAATCCTCTTCTGCCACTGCGGCTGCCTAGTCTCCTCCTTCCACCGCCCCAGCCGCTCATTGTTATCATTGTG AGAGTCGTCTATGACTCTCTATCCACTCCATTCAATCATGTGGTTGTTCCAGACATTTAGTCTCGCTGTCGTGACTCCCC TCCTCCGTTCAGTCTCGTTGCCACTCAGTCGGCGTTTCTTGGAGTTCATGCGCCTCCCCTTGTCGTGCCAATCCTCCCAA AGTTGTTCTCTCTTAAATTTGTAGTCATGCCGTCAAGGTTCTCTCTTAAATTTGTAGTCGTGACGTCAGCACTCTATAGA GTGATAATAGAGTACTGACTAAAAGTGGATGTACGCCTAACATTTTCATTAACGCTTTTTATATTGCAAGTCTACTTTTA AATTATATCTTAAAGTATTTTGTTATGATGTGGTTGTTAAGGCATCAGTGTTTTATTCACTAAAAAATTGATTTGAACGA AAAGAGTGGTGGTCTAGATAAAAAAGAAAAGCTCATATATACAATTGTGAGTTGACCAAGCAAGACGTGATTCTGGAATT TACTTTTTGTGTAAGCTGAGAAGTGTTTCGGGGTAAGGCAGAAGAAGGCTTGAAAGGGGTGAGTAAGGGTTTGTGATCAG GTGCAGTAAAAAGTGATTCCCGCATGAAAAGGAAAGCAGGTGCCGGGCGAGAGGTGAAGGTGAAGAATTTGTAATTAACT ATAGGAATGACTTACTTATCACATCTCTCATATACTGCACTCAGGGATATCTATTGATTATTTCCTGGCTTAATTTCAAG TTACTAATTAGTCTAATTTACATGACCTGGAATTTTGATGATGCACTTAACGAGCTGATATGTAGTATGTTGTATTTGTA ACGTGTCAGGGAGTTATACGGCTGACGGCGCCATAAGAATGCAATCTGTTGTATACTTAATAAGTTAATTCTCCTTGAAT GATGCACTGTTCAAACTACAACTCATCTCATTTTTTTAAAATAAAATCATCAGCACACTATTCCACACTGCAAGCTGCTT TCCTTCCAATACTTTTCTGCTTATAAAGTTCTTGCCTTCTTCATATAGAATATGGAAAGGCATCACTTCTCACTCTTATT CTTGCACCATCAAACACTGATCTGACTCATCATCTTTAATATCTACCAAGTAAGATTTCATTGTCTCACACATGGATTAG TATCTTCTTCAAGGAAGTTTTGTGTCATACATAATTAACTCTAATTACAAATTGATTAGTCTGACTGTTTTCATGAACCC TAAAGGTGAAATTAGGAGTATGGGAAGAGGGAAGATTGTGATTCAAAGGATCGACAACTCCACGAGCAGGCAAGTGACTT TCTCAAAGAGGAGAAAGGGATTGATCAAGAAAGCCAAAGAGTTAGCCATCCTCTGTGATGCCCAAGTTGGACTTGTCATA TTCTCCAGCACAGGAAAGCTTTATGAATATTCAAGCACCAGGTAATTAGTTTGTTCATATGATATATATCCTTAGCAATA CAAATAAGAATATTGGATCTCATGTGTTTATGGACTGCTACAACTTCTATATGATAATATATAGTCTGGTGTGTTTGCTC TTGATTGATTTGTGATTCTGAATATATACAAATCTGTTACTGAAATCTAATTGATGTATTGTACTTTGTATTTAACTTCA TGTTGGCATATCTCTCAAATAAAAACTATATAGGTAGCGCCTGGTTGGTGTATCATTTTTTAAAAGATATGATGGATGAT GTGATAAAAAAGAAATAGCTACCAAGAAGAGTGAGGTTGAAAAAGGAGACCAAAGAGTAAGTGTGTTCGCATTACATGCG TGAAAATTGGATTGCAACAAGTATATATATATGGGTTATAGCACCCTTGTGCTATCTTATATACATGTTTTTGGCCTTTT AAAAGAAGAAAAATATGCATGGCTAGGTTGAAAGAGACCATGACCTAGGCGAATGAGCTATATCATATATGAGCACCATT ACCATTCTGAAGTCCATCTCAGAAACAGATCTGGGTATGAAAATAATTTCAATTTACTGTATATACACCCAAAATTAAGT AGTGGTAGAAAATAAGTGAAGAGAGACAAAAGATATGTAGATGTGATATATGATACAGACATAACATGAAAAATTAGTTA GTTAGAGAGAAAAATAAGATGTATGAGAGGTAAATGTACGGTTGAGGTATTTATGAATAGTATGTTTGAATCAACTTTTA TTTTTTCTAATTCAATTTTGTGCCTGTTTGTTTTTCTGTTTGCAACTACGTTTGGCATATGTTAATTCAGGAATTCACAT TCCAAGAGAGAAAATGTGAAAGGGGAAGAGTGACCTCATTTACGTTTAATCTGACTGAACTGAAATAAAACAGGGCCTTT GTCATCCAAAAGCTTCTTAATTTTCATAGATAGTTTTGATTTTAAAATCAATTATAGAAGCATTTCCGGCATTGTGCAGT CAATCCCTATAGAAGTGAAATCTTGTGAAAGGTTGTATTACATTTCTAAACCAAACCTTCATGTGTGCTGGCTGCGAGAC CCAGTGAAGGGATTCATATATATTTGATATTGGTTCACTGATATAAGTTTTAGCCAGCCAGCTATCTCCCAGCATGAACT ATTCAATAAACAAAACGAAGGTTGATGAACTACAAATATATTAAGAAAACTGATTATAAAAATTTATTTCCATGAAAATT TTATATTCTCTCATTATCTTAAAAGCTTAAATGATTTGGTGAAACTCAAATAGTGTGTGTTTAGATAAACAGGTTAGTTA GTTTCAAAAAAAGATAAACAGTTTAGTTAAACATTTATGGCAACAAAACCGTTTATTCATAAACTAATATAAAAATTTAA TTAAAATAAATTCAAAATAAGTTATAATAGATTTAAGTGTTCAGTTTATCGGTCGATTATAAAGCTATTAAAATAAGTAC TTTCAAACACCAGTTATACTCTGAGAAAAAATTTAATAAATAAGTTCTTCCAAGTAGACAATATATCTATCACATGCCTT GGTACATGTACGTTATTCTTGTGACTTTAATACTATATCAAGAATTTGCCATTTTAAAGCTTAAACAAGATAGAAACATA TAAATAATTTTGAAGAAATGTTATCAATACACTTTTTTTTTGAAAGAATTAATACACTCATATATCCTAACACACTTATA ATGATTTATTTATTTTTTAGAAAGTCAATATATTTTGCTCTCTTCTTAAAAAAATTCTTAACTTTTTAAAAAATAAATCA ATCATAACAAGTGTGTTAGAATATATCGTTAAAAAAGTATGTTGAAGGACAATCGCATGTCAACTTAGCATCCATCAAAT GCATTGGTCGACCAGTAGAGCTGCAATCCACTTATAGGTTTGGTTTTGAATAATTAGGGCATGTTTGATTGCAGTTTCTA AAAACTATATTTAAAAACTGTTTTTCAAGAAAAAAATAACTGTTTGAATTAGATGTTTTCCAACATTAAAAAAATTGTAA TATGAAAACTAAAAATTGAATCAGAAAACATATTTTAAACTATTCTAGTATTTTAGTCTTAAAAGCTAAAACTGTTTTAA AAAAGACAAACGTTTTTAAATACCCATATTTTTTTATCTTCGATGATGGCTATCAACTTAGTTCCCTAACTTTAAGTTTG ACAATGGTTAAAGCTAGTTATGCAAGGATTAGAATCATGCACGCAGAATACCAAATTCCAACATGCTATAAATGGTGTTA GTTGAAGTAAGTGTATAGCATTAAGAATGAGGAAGTGTTGGCCAGCAGCCCCACACCAAAAGCAATATTTAAGTCTAATT TAGGATCACTATCATTGGAAAGTGTATCCATCAGATAAAGTGATGTCGCCACTAGTTTTGATAGAGAGCCTAATTAGGTT ATTAAACCTAGCTGACCTAGCAATTTTAATTCGTTAGGTTTCATTGTATCAATCTTGTTTGGTTTACCCTTGTTAGGGTC TGGCGTGGGATTTGTTCCTTTTCCATATTGTATTCTTTGTTCTTAGTTTAGTCCATATATATGTTCGCTCTGTTTGGAAT TTCTAGCACTTATATATGCTAGAAGATGTGTTTATCTGAATCCTTAAGCTTTCCGGTGAAGTCTACAATTTCATGTAGAT TAAGGATCTATGTCTTCTCGATGAATCAATGTCCTCTTATGTGAAAATTCTCTCATGTTTTCTCATATTGAAATTATGAG AGTTTTTCCATGAGAGGATATTGATCCATTAAAACTATATGTGCTTTGAATTATGATAGTAGAGTATATGGTTTAATTAT TTGTTCACCTTAAAGATAATTTCAAATGCAGAGCAATTAAATCACTATCACCATCCCAAACATAATCTTCCAGGAAGCTA GAAACATCGGGCGAGGTTGCTTTCCCAGCACATGATGAGACAGCATAAGTGCTCATGTCTCAGCCCTCAACCACCACCAA GACCTTAACTTAATCAACTTGAAAATATCAAATACAAAAGCCCCTATTGAGTTAAAAACCAAATCTTTTATCACGATCCG TAGAGTAAAATTTTGCACCCCAATCAACATTCAAATCTTTTTTGAGACGAATCTGAAGGGATGCCTTGGAAATCAAGAAA ATTCTCCAGAGGAAAGTGGTGTGGTGTAAAATGAGTAACCTAGCAATTGTAAAACTAGAAATCAGCCCTTAGCCATTACT GAAAAAACAAAGAACAAGTGAAGAGAGTCATCCACATGATCTTCACATGATGTGCCAAAAGTTGAATCTTATTGCAGTAT CGCTCTTCTCAGCAGACTAATCTTAGTATGTATTATTAAGAATTACCTTCAATAAAAAGCATTTGAAGGTGCTAGATCAT TCATTCTAGAAGTTTTTACAGAACAAATGAACAATAGAATTCACTACAAATTTGTATGCTGACTTTAATTATCCTATAAG TTCTCGAAGCCAACTCCAAGAATCAGGAGTGTGTTCATGCAGGTTATGCATTCTAACATATGAGCTAATAGTTCACCTTC CCATTATAAAATGGTTCAGAGGAATTGAGAGAAGGAAAGGAACTTGAGGAGAAACCAAGGGGAAATGGATTTCAGATTAT ATATTGAATGAACATTGTTATCTTGAATATACACTATGGAGATTTATATACAAAGATCAGAAAGTCTAACTAAGTACAAC TAAGCAATCTAGCTGAATACACAACAAACTAACTAACTGCATAACTTAGCTAGTTTAAATTATGTGCTTAAAATCCCCCG AAAGCTGAAGTGTGCTTATATCATGTGCAAGTTTATAACTAACTGCATAACTTGGCTAGTTTTTAGCATATTGCAGTACC AAAATCAACTCCCTTTGGCTTATTATGAAAGGTTCAATGGCCTGTATAGGGGCCTCTTGCATTCTCTGGTGATTTCACTT TGCACATATGCTTAAGTCTCACTTCGACAATGATCATACATTAACCATACTTCAAGCCAAAGTTTTATTTCACTTACAAT CCTGGGGACAAGGAGTCTTGGATATAACATACCTTGACAAGTTATTGTATCATGTTATAGTAGGAAGTAGTCTAATAGTT CTGTCTTTCTTCTTCTCCGCCTTATTCCCTGAATCCCTGTCATGTCTGATAGAAGATAGATGGAACTAAGTAGTCAAGTG GTAAAATGTAGTGCAGAAATTTTGTTATCAATATACTTGTAAAGATCCAACCAGCTGTGTGTTCGTGAGATTGGACTTTG AAACTATGGATGTGTGACAAAAGGCATCTTTATTCCTATGACCTATCCAGACACACACATATGCAGTGATTTTATCTGTT TCTTCTTGGGTGACTCGAAGACAGAATCCTCATACCCAATAGGTGAAAAGTTCAGCTATTGGGATATTAAGCACCCAAGG TGAAGTCCCTTCTATCAGTGTTTTTTTGATACACAGATTGAAGAATCAAAACTCAAGAGACTAGGCTACATCCTTAACCT CCAAGTCTTTTCTCCACTATGACCAACACATGTTGGTGAAAATCACTCCTCTGTAATCTACATGCCATGTAAATCAGTCA TTATAATATCAAAATTTAGTAGAAGCTTCAAGACAAATATATTTGACAATTAAGTAACAAAAAGAATAAGATATCTGAAC CCAACATTCTATATAGCGTTCCAATGTATTATGCAGGTTAAGGTCAATAGGTCATCCAGAAAATATATCATATAATTCTA AAGTTTATTTCTGCTGAAGAAAAACACTGAATCATCACATAAATTAATTATCCTGATTACAACTTTCCTTTCTCCACAGA TATCTTGTGTTATTTATTTTACAAACAAAACTATTGAAGTTCATAGACAAGTCACAAGTGGTTTAATACTGGCCCTTGTC CTTTAATACACCAGAGTCTAAAACCTGTTAAGAAAGGTTCATGCACACCCTACCAGAGGGAAAAGCATGCGGGAAAAAAA ATCAATTATTAATGATAAGTATAATTGTACTCAATGTTGTGAAAAGCTAGATTCTACGTAGAATAGGAGAGGGGTTCAAA ATCGTATAATCGTATAATCGTAAATTGAATCGTAAGATTCTACCATAAATAGAAAAACAAAAAAATAGCATTGATAGCAT GGGAACACCTCAGGTTGGAAATTTTGGGTTGTGGAGGAAAATTTGGAAGCTTAAAATACCAGAGAAGCTTCGTTTCTTCT TATGGCTGCTTGCCCATGGTGCTTTGCCCACGAATGCTAAGCGTCTCCAGTCCCACCTAGCAGCGACCGCCGCTTGTCCC AGATGTACTGCAGAGACAGAGGACATCAACCATTTGTTTCGGTTTTGCCCAGATTCGCGAGACCTGTGGAGTAACTTCCG AACGGTTCTGCCAGCTCCCGCTGCTCACGTCGAGGTCGACACTTGGCTTGCTGGTTTACTGATACACCGTCACGCCACTT TGGCTGTTGCTATTTTATGGTGGTGTTGGAGGTGGCGTAACCATAAAGTTTTCAATGACAATGAGCTTCCTTTGAACATC ATTCTGCGGTGCATCCTCCGGGACGAAGCCGTTTGGAGGAGTTCTCTTCAATCCCTGGTGCAAGAAGATCATATGGCGAA TTTGGCTACCTTCTCTTCTTCCCCGACTGTGTCCATTGCCGTTGACGGTAGCTGGAATCCCTCGGTGAACAGGATGGGGT GTGCCGCTATTGTGAGGGACTCTTGTGGCAATTGGTTGTCTGCTATCTCTGTCAGTTATGCTTCTGGCTCGGCCTTTCTT GCAGAGATTCTTGCTATGGAGCTGGGGCTCCGTCATGCTCTGGAGATAGGCTACACCGAGGCCTCGTGCTCGTCTGACTG CTCGAAGGTTATCCATGCTCTACATGAAGGGACCAACATCACAAGCTACTGGAATAGGGAGGAGATATGTCGCGTTCGTG CTGCTATGGCAAGTATGCAGCATGTTACTTTGTTCCAGGTTGATCGAGCCAAGAATAACACGGCTGACAAACTAGCCCGG GAGGCTTGCTGTCAAGGCTCACCGGTTCAAGTTTGGAAGCAGCCACCTTCCTTCGTTTATGATTCTTTGTTTTTAGATTC TCTTAGTTAGTTTTGTCGTTTTGTTTCTTTTCCTCCTGTAACCAAAAAAAAAGTCACATCATTTAACAAAAATTGGAATA AAAATTCATCAGATTAACATCCATATAAGTCATAATCTCAATCCAAAATCATAAGAGTACTAGAACATGAAATTAAAAGA TGAAACAGAGACGTTGAAGAATGAAGGAAAACAAAGATGTTGAAGAATGAAGAGAAAACATAAGAGGAAGAGACCTAAAT AGAGACTACAGAAAACAGAGCATGAATGCGTGATTCAATTCACTCTACTATGAGTGAATTAAATAGGCAATTAGAGGCAT GAAGGTTGGGTCACATGAGTTGATTTTTCGAAATATACAATCAGTTATTAATTCTTATCAATTAACCATTCAAATTTGGC AACTACAATCAATTAGAGCTTCAATTTCAAAATCCCCTAAATGCTGGGTGGTGGGTTGTTTTTTCCACAAAGTCAAAAAA CTCTCTAGTTTCCCTAATTTTAGGAATCAGCTTCAAAAATTAAAAAAATACTAGAATCGTAAGATTCAATAGGATTTTAT GATTTTACAATTAAAATCTAAGATTCTACGGGATTCCACCAAAAAAAGATTTTGCATGCGTTTTGAATAGGAGCAGTGCT GCAAAATCGCAAAATCTTTGCTAACATTGATTGTACTAGCATCGAACTAAAGTCAGCAATGAATCACTAGTAAAACTAAA AAAGATGATCAGCTCATGCTGGAAGTTATTATCACAATGTAACAATCACTTCTCATCCATACCTGTTCAAGTTGTTTCAT GAATGAATCACATTGATACTTCACATCCTTTGGCAGGCATCTACACATGAACTTTGTTAGATTAATAATTTCTCATGGAA ACCAAGCTACTGATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTATCTTTGGATTC TAGGATATGCTATATGTTTTTCACAATGTCTTCTTCATATACAACTTTCGATGATCAATTGTACTAACAATTGAGTAAAA CAAATTAAAATGTGTGATGATTTTTTTGTGACCAGCATGAAATCAGTGATCGAGAGATATAAGACATGCAAGGGGGAACA TCAACTAATAAATCCAGAATCTGAAGCCAAGGTATGCTCTGTTAACCACTCTTCAGTATTGTCCCGTAACTTGTCCTGCC ATAAATAAGTATAACAGCTACAAGCGAAACTGTTATCATCAATATTTTGTTTACTGACGAACTTATTAAGTGTGTAACTA TGCCTCATATGACATATTTTCTAGGATCCAAAAACAGAACTGCATGTAATTTTTTGTTCTATATGTAAAAAGCAAGATCC ACACCCTCTCCTCAATTGAGCAAATCATAACTTTATAATATAGTGAGCTAAATATCTTTGGCCAATCTATGAACTATCAG TACTTCTGAGAACAGAGAAAGGACTGTACTGACCTTATGTCACATAACTGCAAGATTTCTCATGCATCAAGTGTATCAAA TGAATCCCAAGCATTACTAAAAGGAAAAGATTTGTTGACATCCGCATAGTGCAGACATTCAACAGATACCCAGAGTGAGA AGAGAAGAAAAAGAGAGAAACAATTGATTTGATAAAAAGAGAGAGATAGAAAGAAAAATGAGGTGTCGACTAGGTGTCTA CAATAGTGCATAGTTTATATGTCTAAGTATCATTACTGTTTTAATCCTCCTCCTCATCCAAATAGATAACAATAAAACAT GAATAGACTACAAAAGAACAACCTAAAAATGAATTAATAAGTATGTAGATCATGATGAAGAACAACCTAATTACATCTGG TCAGTGCTCATATTAAATCTGACAATCAGCTTCTTAATTTAAATCACATTGATTTCATATCTCATTATAGATCATGTTGA AGTATTCTGTTCAGTTCTAACTCAACATGATGAAAATCTTCCTTTTACTTCTTTTTTACCCTTTGCAGTACTCATGTACA TCGTTTTACTTGATAATTGATAGTTTTGGCAAAGGGAGGCAGAAGGTTTAAAGCAGCAAGTGCAGAATCTACAAGAAAAC CATAGGTACAACCTTTTTACTAATTTATTCAGAATTTTATTTTATAACTCTACTAAGTAAATAAAACAGGTACTCTTCTG GAAGCACGTCTCAGACAAGAAGGTATTACCATACTATATAGTAGGTGGCTGTGAACACTCTTGTTCCTCCTTTTCCTTTT TTATCAGAATTACATAAAGCGAAAGAAAAACGAAACCTTGCCAATCCCATGATTATGCACACAAGTGACATAACAATACT ATTGAATACAAATTCTACCTTAGAGCTTCCACATCAATTAAGCACATTAGGCAACACACCCAAAGATATACATACAAACA TTCTAATAGTGGTGATTAATACAAGAGAATGAATTTGCATATGACATTAAGCTATGTGCAAACATGCATTTTTGCTAATA ATGGTGACTAATTTAAGAGAACGAATTGACATATCTCATTAAACTCTGCATTTGAGGACACAGGCAATTGCTTGGAGAAC AGCTCTATGGTTTGAGTGTGAGAAACCTACAGGATCTAGAGAATCAACTAGAAATGAGTCTCCAAGGTGTCCGCATGAAA AAGGTCAACTAACTTTTAGATTCACACTGTGAAGGAATGAAGATATATGTGCTTGATTGATTAATGACCCGACTAACATA GACAGCAATTGACAATTTTAATCAAATTCTGCAGGAAAATACTCTGACAGATGAGATCCAAGAGCTGAACCGAAAGGTCT TTCTCAGCCATCACCTTGAATCAGCTAATTTTCCTCTAAAAAAATTCATAACACTGACAGACTTTATGTTTCAATACAGG GAAACCTCATACATCAGGACAACATGGAGCTTTATAAGAAGGTAAACCTCATTCAACAAGAAAACAAACAACTACGCAAA AAGGTAGCAAAGATTGTTAAATCAAAAGAGCCTTATATTTAACCATGCAGTGTGACAAAAGAAAGCACAGCTGCATAGAT AAATCTCCGCAACACACTCTATTGAGCACACTCTCTACGATTGGTCTATTTCTTAAAATATCAGCGCAATTATAGAGATT GTGTTCAAAAGTATGTGTGACTAACTAGTATTTCTCAAAAAGCACATATTGGTTAACAATGAGGGTTCATGTCCCAGGTG TATGGCACAACTGAAACGGCGACAACGAGCAGAAATCCATTTGTTCTGTTTCCAAATGCAGGAGGGTATCCACAATCAGT GGTCCAATTTCAGTTAAGCCCGCCTGAGCAAGAAACATCAGGCAGTGCCACAATTTGAAGGTTGTGGAGTGATATTTCAG CAATACACTCAGAAAAATATAATGATGATATTGCAATTTGCAGCTTAATAAGGACATCAAATGAAGTGAAGGTTCATCTG GTATAGATGAATAGTATACTAATCACAAATCCCACAAGAGAAGCCTTAATGTAGTATTATTATCTGAAATTGGATGATAA AAGCTTATTATTATCAGTACAAGAACATTTTCATGTATAATTGCATATGCAAAATATCGAATAAAATCTTCCTTTTCGTG GCTTCACGCACCTAGCTGCAAATGCACACTCACCAGTCACCTCAGCACGTAACGATGCTGTCCATTCATCAGAAAGAGGG ATTTATATAACCTAAACGGGCTCTTACTCTCCTATTAGTTTCGATCAGCATTTGTTTTGTGGAATAGTTGTTTCTTCATG AAATGAATAACACGAAGTGAAATTGTTGAATTAGAGCTCGTTTGGGTACCACCTATTTTCTTGTTTCCATTAAAATAAGT GTATTTTTCAAATTTTAAAAAGTGTGTTTAGAAAATGTATGTTATAAATACATTTATGTTAAGTTGTGGAGGTTTTGCGG GATGGTAGGCTGTCCTTCCATGAGCTTGCCTCGGATTTTAGGGAGCTCCAACTTATTTTGGATCGAGATTGGCATGTCCA ACTTCTCCATATTCCTCAAACGGTTAATGATATAGCGGATTGTTTAGCGAGTTTGGGTTCAGAGCGTCAGTGTTCATACA CTAGGTTGGAGGAGCCCCCTCCTCAACTTCTTCCTGTTTTAGCTAGGGATCTCCTAGCTTTATAGTGTCATTTTAATTTT CCGATGTAAAAAAAAAAATATACAATATTACCCATTTTGAAACTTTGCC
CDS sequence (LotjaGi2g1v0330100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAGGGAAGATTGTGATTCAAAGGATCGACAACTCCACGAGCAGGCAAGTGACTTTCTCAAAGAGGAGAAAGGG ATTGATCAAGAAAGCCAAAGAGTTAGCCATCCTCTGTGATGCCCAAGTTGGACTTGTCATATTCTCCAGCACAGGAAAGC TTTATGAATATTCAAGCACCAGCATGAAATCAGTGATCGAGAGATATAAGACATGCAAGGGGGAACATCAACTAATAAAT CCAGAATCTGAAGCCAAGTTTTGGCAAAGGGAGGCAGAAGGTTTAAAGCAGCAAGTGCAGAATCTACAAGAAAACCATAG GCAATTGCTTGGAGAACAGCTCTATGGTTTGAGTGTGAGAAACCTACAGGATCTAGAGAATCAACTAGAAATGAGTCTCC AAGGTGTCCGCATGAAAAAGGAAAATACTCTGACAGATGAGATCCAAGAGCTGAACCGAAAGGGAAACCTCATACATCAG GACAACATGGAGCTTTATAAGAAGGTAAACCTCATTCAACAAGAAAACAAACAACTACGCAAAAAGGTGTATGGCACAAC TGAAACGGCGACAACGAGCAGAAATCCATTTGTTCTGTTTCCAAATGCAGGAGGGTATCCACAATCAGTGGTCCAATTTC AGTTAAGCCCGCCTGAGCAAGAAACATCAGGCAGTGCCACAATTTGA
Protein sequence (LotjaGi2g1v0330100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGKIVIQRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGLVIFSSTGKLYEYSSTSMKSVIERYKTCKGEHQLIN PESEAKFWQREAEGLKQQVQNLQENHRQLLGEQLYGLSVRNLQDLENQLEMSLQGVRMKKENTLTDEIQELNRKGNLIHQ DNMELYKKVNLIQQENKQLRKKVYGTTETATTSRNPFVLFPNAGGYPQSVVQFQLSPPEQETSGSATI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 1.1E-38 | ||
| ProSiteProfiles | 1 | 61 | 61 | 30.922 | ||
| SUPERFAMILY | 2 | 87 | 86 | 9.29E-33 | ||
| PANTHER | 2 | 201 | 200 | 1.7E-95 | – | |
| PANTHER | 2 | 201 | 200 | 1.7E-95 | – | |
| CDD | 2 | 77 | 76 | 1.73267E-45 | ||
| PRINTS | 3 | 23 | 21 | 1.6E-27 | ||
| ProSitePatterns | 3 | 57 | 55 | - | ||
| Pfam | 10 | 57 | 48 | 9.2E-25 | ||
| Gene3D | 13 | 107 | 95 | 2.2E-29 | ||
| PRINTS | 23 | 38 | 16 | 1.6E-27 | ||
| PRINTS | 38 | 59 | 22 | 1.6E-27 | ||
| Pfam | 82 | 169 | 88 | 7.8E-25 | ||
| ProSiteProfiles | 85 | 175 | 91 | 14.233 | ||
| Coils | 85 | 112 | 28 | - | – | |
| Coils | 162 | 182 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0330100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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