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LotjaGi2g1v0330100.2

Overview

Field Value
Gene ID LotjaGi2g1v0330100
Transcript ID LotjaGi2g1v0330100.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Agamous MADS-box transcription factor; TAIR: AT4G37940.1 AGAMOUS-like 21; Swiss-Prot: sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27; TrEMBL-Plants: tr|K7K1C4|K7K1C4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:80576953..80588269) extracted from Lotus japonicus Gifu genome v1.2.

TCTAGATAAAAAAGAAAAGCTCATATATACAATTGTGAGTTGACCAAGCAAGACGTGATTCTGGAATTTACTTTTTGTGT AAGCTGAGAAGTGTTTCGGGGTAAGGCAGAAGAAGGCTTGAAAGGGGTGAGTAAGGGTTTGTGATCAGGTGCAGTAAAAA GTGATTCCCGCATGAAAAGGAAAGCAGGTGCCGGGCGAGAGGTGAAGGTGAAGAATTTGTAATTAACTATAGGAATGACT TACTTATCACATCTCTCATATACTGCACTCAGGGATATCTATTGATTATTTCCTGGCTTAATTTCAAGTTACTAATTAGT CTAATTTACATGACCTGGAATTTTGATGATGCACTTAACGAGCTGATATGTAGTATGTTGTATTTGTAACGTGTCAGGGA GTTATACGGCTGACGGCGCCATAAGAATGCAATCTGTTGTATACTTAATAAGTTAATTCTCCTTGAATGATGCACTGTTC AAACTACAACTCATCTCATTTTTTTAAAATAAAATCATCAGCACACTATTCCACACTGCAAGCTGCTTTCCTTCCAATAC TTTTCTGCTTATAAAGTTCTTGCCTTCTTCATATAGAATATGGAAAGGCATCACTTCTCACTCTTATTCTTGCACCATCA AACACTGATCTGACTCATCATCTTTAATATCTACCAAGTAAGATTTCATTGTCTCACACATGGATTAGTATCTTCTTCAA GGAAGTTTTGTGTCATACATAATTAACTCTAATTACAAATTGATTAGTCTGACTGTTTTCATGAACCCTAAAGGTGAAAT TAGGAGTATGGGAAGAGGGAAGATTGTGATTCAAAGGATCGACAACTCCACGAGCAGGCAAGTGACTTTCTCAAAGAGGA GAAAGGGATTGATCAAGAAAGCCAAAGAGTTAGCCATCCTCTGTGATGCCCAAGTTGGACTTGTCATATTCTCCAGCACA GGAAAGCTTTATGAATATTCAAGCACCAGGTAATTAGTTTGTTCATATGATATATATCCTTAGCAATACAAATAAGAATA TTGGATCTCATGTGTTTATGGACTGCTACAACTTCTATATGATAATATATAGTCTGGTGTGTTTGCTCTTGATTGATTTG TGATTCTGAATATATACAAATCTGTTACTGAAATCTAATTGATGTATTGTACTTTGTATTTAACTTCATGTTGGCATATC TCTCAAATAAAAACTATATAGGTAGCGCCTGGTTGGTGTATCATTTTTTAAAAGATATGATGGATGATGTGATAAAAAAG AAATAGCTACCAAGAAGAGTGAGGTTGAAAAAGGAGACCAAAGAGTAAGTGTGTTCGCATTACATGCGTGAAAATTGGAT TGCAACAAGTATATATATATGGGTTATAGCACCCTTGTGCTATCTTATATACATGTTTTTGGCCTTTTAAAAGAAGAAAA ATATGCATGGCTAGGTTGAAAGAGACCATGACCTAGGCGAATGAGCTATATCATATATGAGCACCATTACCATTCTGAAG TCCATCTCAGAAACAGATCTGGGTATGAAAATAATTTCAATTTACTGTATATACACCCAAAATTAAGTAGTGGTAGAAAA TAAGTGAAGAGAGACAAAAGATATGTAGATGTGATATATGATACAGACATAACATGAAAAATTAGTTAGTTAGAGAGAAA AATAAGATGTATGAGAGGTAAATGTACGGTTGAGGTATTTATGAATAGTATGTTTGAATCAACTTTTATTTTTTCTAATT CAATTTTGTGCCTGTTTGTTTTTCTGTTTGCAACTACGTTTGGCATATGTTAATTCAGGAATTCACATTCCAAGAGAGAA AATGTGAAAGGGGAAGAGTGACCTCATTTACGTTTAATCTGACTGAACTGAAATAAAACAGGGCCTTTGTCATCCAAAAG CTTCTTAATTTTCATAGATAGTTTTGATTTTAAAATCAATTATAGAAGCATTTCCGGCATTGTGCAGTCAATCCCTATAG AAGTGAAATCTTGTGAAAGGTTGTATTACATTTCTAAACCAAACCTTCATGTGTGCTGGCTGCGAGACCCAGTGAAGGGA TTCATATATATTTGATATTGGTTCACTGATATAAGTTTTAGCCAGCCAGCTATCTCCCAGCATGAACTATTCAATAAACA AAACGAAGGTTGATGAACTACAAATATATTAAGAAAACTGATTATAAAAATTTATTTCCATGAAAATTTTATATTCTCTC ATTATCTTAAAAGCTTAAATGATTTGGTGAAACTCAAATAGTGTGTGTTTAGATAAACAGGTTAGTTAGTTTCAAAAAAA GATAAACAGTTTAGTTAAACATTTATGGCAACAAAACCGTTTATTCATAAACTAATATAAAAATTTAATTAAAATAAATT CAAAATAAGTTATAATAGATTTAAGTGTTCAGTTTATCGGTCGATTATAAAGCTATTAAAATAAGTACTTTCAAACACCA GTTATACTCTGAGAAAAAATTTAATAAATAAGTTCTTCCAAGTAGACAATATATCTATCACATGCCTTGGTACATGTACG TTATTCTTGTGACTTTAATACTATATCAAGAATTTGCCATTTTAAAGCTTAAACAAGATAGAAACATATAAATAATTTTG AAGAAATGTTATCAATACACTTTTTTTTTGAAAGAATTAATACACTCATATATCCTAACACACTTATAATGATTTATTTA TTTTTTAGAAAGTCAATATATTTTGCTCTCTTCTTAAAAAAATTCTTAACTTTTTAAAAAATAAATCAATCATAACAAGT GTGTTAGAATATATCGTTAAAAAAGTATGTTGAAGGACAATCGCATGTCAACTTAGCATCCATCAAATGCATTGGTCGAC CAGTAGAGCTGCAATCCACTTATAGGTTTGGTTTTGAATAATTAGGGCATGTTTGATTGCAGTTTCTAAAAACTATATTT AAAAACTGTTTTTCAAGAAAAAAATAACTGTTTGAATTAGATGTTTTCCAACATTAAAAAAATTGTAATATGAAAACTAA AAATTGAATCAGAAAACATATTTTAAACTATTCTAGTATTTTAGTCTTAAAAGCTAAAACTGTTTTAAAAAAGACAAACG TTTTTAAATACCCATATTTTTTTATCTTCGATGATGGCTATCAACTTAGTTCCCTAACTTTAAGTTTGACAATGGTTAAA GCTAGTTATGCAAGGATTAGAATCATGCACGCAGAATACCAAATTCCAACATGCTATAAATGGTGTTAGTTGAAGTAAGT GTATAGCATTAAGAATGAGGAAGTGTTGGCCAGCAGCCCCACACCAAAAGCAATATTTAAGTCTAATTTAGGATCACTAT CATTGGAAAGTGTATCCATCAGATAAAGTGATGTCGCCACTAGTTTTGATAGAGAGCCTAATTAGGTTATTAAACCTAGC TGACCTAGCAATTTTAATTCGTTAGGTTTCATTGTATCAATCTTGTTTGGTTTACCCTTGTTAGGGTCTGGCGTGGGATT TGTTCCTTTTCCATATTGTATTCTTTGTTCTTAGTTTAGTCCATATATATGTTCGCTCTGTTTGGAATTTCTAGCACTTA TATATGCTAGAAGATGTGTTTATCTGAATCCTTAAGCTTTCCGGTGAAGTCTACAATTTCATGTAGATTAAGGATCTATG TCTTCTCGATGAATCAATGTCCTCTTATGTGAAAATTCTCTCATGTTTTCTCATATTGAAATTATGAGAGTTTTTCCATG AGAGGATATTGATCCATTAAAACTATATGTGCTTTGAATTATGATAGTAGAGTATATGGTTTAATTATTTGTTCACCTTA AAGATAATTTCAAATGCAGAGCAATTAAATCACTATCACCATCCCAAACATAATCTTCCAGGAAGCTAGAAACATCGGGC GAGGTTGCTTTCCCAGCACATGATGAGACAGCATAAGTGCTCATGTCTCAGCCCTCAACCACCACCAAGACCTTAACTTA ATCAACTTGAAAATATCAAATACAAAAGCCCCTATTGAGTTAAAAACCAAATCTTTTATCACGATCCGTAGAGTAAAATT TTGCACCCCAATCAACATTCAAATCTTTTTTGAGACGAATCTGAAGGGATGCCTTGGAAATCAAGAAAATTCTCCAGAGG AAAGTGGTGTGGTGTAAAATGAGTAACCTAGCAATTGTAAAACTAGAAATCAGCCCTTAGCCATTACTGAAAAAACAAAG AACAAGTGAAGAGAGTCATCCACATGATCTTCACATGATGTGCCAAAAGTTGAATCTTATTGCAGTATCGCTCTTCTCAG CAGACTAATCTTAGTATGTATTATTAAGAATTACCTTCAATAAAAAGCATTTGAAGGTGCTAGATCATTCATTCTAGAAG TTTTTACAGAACAAATGAACAATAGAATTCACTACAAATTTGTATGCTGACTTTAATTATCCTATAAGTTCTCGAAGCCA ACTCCAAGAATCAGGAGTGTGTTCATGCAGGTTATGCATTCTAACATATGAGCTAATAGTTCACCTTCCCATTATAAAAT GGTTCAGAGGAATTGAGAGAAGGAAAGGAACTTGAGGAGAAACCAAGGGGAAATGGATTTCAGATTATATATTGAATGAA CATTGTTATCTTGAATATACACTATGGAGATTTATATACAAAGATCAGAAAGTCTAACTAAGTACAACTAAGCAATCTAG CTGAATACACAACAAACTAACTAACTGCATAACTTAGCTAGTTTAAATTATGTGCTTAAAATCCCCCGAAAGCTGAAGTG TGCTTATATCATGTGCAAGTTTATAACTAACTGCATAACTTGGCTAGTTTTTAGCATATTGCAGTACCAAAATCAACTCC CTTTGGCTTATTATGAAAGGTTCAATGGCCTGTATAGGGGCCTCTTGCATTCTCTGGTGATTTCACTTTGCACATATGCT TAAGTCTCACTTCGACAATGATCATACATTAACCATACTTCAAGCCAAAGTTTTATTTCACTTACAATCCTGGGGACAAG GAGTCTTGGATATAACATACCTTGACAAGTTATTGTATCATGTTATAGTAGGAAGTAGTCTAATAGTTCTGTCTTTCTTC TTCTCCGCCTTATTCCCTGAATCCCTGTCATGTCTGATAGAAGATAGATGGAACTAAGTAGTCAAGTGGTAAAATGTAGT GCAGAAATTTTGTTATCAATATACTTGTAAAGATCCAACCAGCTGTGTGTTCGTGAGATTGGACTTTGAAACTATGGATG TGTGACAAAAGGCATCTTTATTCCTATGACCTATCCAGACACACACATATGCAGTGATTTTATCTGTTTCTTCTTGGGTG ACTCGAAGACAGAATCCTCATACCCAATAGGTGAAAAGTTCAGCTATTGGGATATTAAGCACCCAAGGTGAAGTCCCTTC TATCAGTGTTTTTTTGATACACAGATTGAAGAATCAAAACTCAAGAGACTAGGCTACATCCTTAACCTCCAAGTCTTTTC TCCACTATGACCAACACATGTTGGTGAAAATCACTCCTCTGTAATCTACATGCCATGTAAATCAGTCATTATAATATCAA AATTTAGTAGAAGCTTCAAGACAAATATATTTGACAATTAAGTAACAAAAAGAATAAGATATCTGAACCCAACATTCTAT ATAGCGTTCCAATGTATTATGCAGGTTAAGGTCAATAGGTCATCCAGAAAATATATCATATAATTCTAAAGTTTATTTCT GCTGAAGAAAAACACTGAATCATCACATAAATTAATTATCCTGATTACAACTTTCCTTTCTCCACAGATATCTTGTGTTA TTTATTTTACAAACAAAACTATTGAAGTTCATAGACAAGTCACAAGTGGTTTAATACTGGCCCTTGTCCTTTAATACACC AGAGTCTAAAACCTGTTAAGAAAGGTTCATGCACACCCTACCAGAGGGAAAAGCATGCGGGAAAAAAAATCAATTATTAA TGATAAGTATAATTGTACTCAATGTTGTGAAAAGCTAGATTCTACGTAGAATAGGAGAGGGGTTCAAAATCGTATAATCG TATAATCGTAAATTGAATCGTAAGATTCTACCATAAATAGAAAAACAAAAAAATAGCATTGATAGCATGGGAACACCTCA GGTTGGAAATTTTGGGTTGTGGAGGAAAATTTGGAAGCTTAAAATACCAGAGAAGCTTCGTTTCTTCTTATGGCTGCTTG CCCATGGTGCTTTGCCCACGAATGCTAAGCGTCTCCAGTCCCACCTAGCAGCGACCGCCGCTTGTCCCAGATGTACTGCA GAGACAGAGGACATCAACCATTTGTTTCGGTTTTGCCCAGATTCGCGAGACCTGTGGAGTAACTTCCGAACGGTTCTGCC AGCTCCCGCTGCTCACGTCGAGGTCGACACTTGGCTTGCTGGTTTACTGATACACCGTCACGCCACTTTGGCTGTTGCTA TTTTATGGTGGTGTTGGAGGTGGCGTAACCATAAAGTTTTCAATGACAATGAGCTTCCTTTGAACATCATTCTGCGGTGC ATCCTCCGGGACGAAGCCGTTTGGAGGAGTTCTCTTCAATCCCTGGTGCAAGAAGATCATATGGCGAATTTGGCTACCTT CTCTTCTTCCCCGACTGTGTCCATTGCCGTTGACGGTAGCTGGAATCCCTCGGTGAACAGGATGGGGTGTGCCGCTATTG TGAGGGACTCTTGTGGCAATTGGTTGTCTGCTATCTCTGTCAGTTATGCTTCTGGCTCGGCCTTTCTTGCAGAGATTCTT GCTATGGAGCTGGGGCTCCGTCATGCTCTGGAGATAGGCTACACCGAGGCCTCGTGCTCGTCTGACTGCTCGAAGGTTAT CCATGCTCTACATGAAGGGACCAACATCACAAGCTACTGGAATAGGGAGGAGATATGTCGCGTTCGTGCTGCTATGGCAA GTATGCAGCATGTTACTTTGTTCCAGGTTGATCGAGCCAAGAATAACACGGCTGACAAACTAGCCCGGGAGGCTTGCTGT CAAGGCTCACCGGTTCAAGTTTGGAAGCAGCCACCTTCCTTCGTTTATGATTCTTTGTTTTTAGATTCTCTTAGTTAGTT TTGTCGTTTTGTTTCTTTTCCTCCTGTAACCAAAAAAAAAGTCACATCATTTAACAAAAATTGGAATAAAAATTCATCAG ATTAACATCCATATAAGTCATAATCTCAATCCAAAATCATAAGAGTACTAGAACATGAAATTAAAAGATGAAACAGAGAC GTTGAAGAATGAAGGAAAACAAAGATGTTGAAGAATGAAGAGAAAACATAAGAGGAAGAGACCTAAATAGAGACTACAGA AAACAGAGCATGAATGCGTGATTCAATTCACTCTACTATGAGTGAATTAAATAGGCAATTAGAGGCATGAAGGTTGGGTC ACATGAGTTGATTTTTCGAAATATACAATCAGTTATTAATTCTTATCAATTAACCATTCAAATTTGGCAACTACAATCAA TTAGAGCTTCAATTTCAAAATCCCCTAAATGCTGGGTGGTGGGTTGTTTTTTCCACAAAGTCAAAAAACTCTCTAGTTTC CCTAATTTTAGGAATCAGCTTCAAAAATTAAAAAAATACTAGAATCGTAAGATTCAATAGGATTTTATGATTTTACAATT AAAATCTAAGATTCTACGGGATTCCACCAAAAAAAGATTTTGCATGCGTTTTGAATAGGAGCAGTGCTGCAAAATCGCAA AATCTTTGCTAACATTGATTGTACTAGCATCGAACTAAAGTCAGCAATGAATCACTAGTAAAACTAAAAAAGATGATCAG CTCATGCTGGAAGTTATTATCACAATGTAACAATCACTTCTCATCCATACCTGTTCAAGTTGTTTCATGAATGAATCACA TTGATACTTCACATCCTTTGGCAGGCATCTACACATGAACTTTGTTAGATTAATAATTTCTCATGGAAACCAAGCTACTG ATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTATCTTTGGATTCTAGGATATGCTA TATGTTTTTCACAATGTCTTCTTCATATACAACTTTCGATGATCAATTGTACTAACAATTGAGTAAAACAAATTAAAATG TGTGATGATTTTTTTGTGACCAGCATGAAATCAGTGATCGAGAGATATAAGACATGCAAGGGGGAACATCAACTAATAAA TCCAGAATCTGAAGCCAAGGTATGCTCTGTTAACCACTCTTCAGTATTGTCCCGTAACTTGTCCTGCCATAAATAAGTAT AACAGCTACAAGCGAAACTGTTATCATCAATATTTTGTTTACTGACGAACTTATTAAGTGTGTAACTATGCCTCATATGA CATATTTTCTAGGATCCAAAAACAGAACTGCATGTAATTTTTTGTTCTATATGTAAAAAGCAAGATCCACACCCTCTCCT CAATTGAGCAAATCATAACTTTATAATATAGTGAGCTAAATATCTTTGGCCAATCTATGAACTATCAGTACTTCTGAGAA CAGAGAAAGGACTGTACTGACCTTATGTCACATAACTGCAAGATTTCTCATGCATCAAGTGTATCAAATGAATCCCAAGC ATTACTAAAAGGAAAAGATTTGTTGACATCCGCATAGTGCAGACATTCAACAGATACCCAGAGTGAGAAGAGAAGAAAAA GAGAGAAACAATTGATTTGATAAAAAGAGAGAGATAGAAAGAAAAATGAGGTGTCGACTAGGTGTCTACAATAGTGCATA GTTTATATGTCTAAGTATCATTACTGTTTTAATCCTCCTCCTCATCCAAATAGATAACAATAAAACATGAATAGACTACA AAAGAACAACCTAAAAATGAATTAATAAGTATGTAGATCATGATGAAGAACAACCTAATTACATCTGGTCAGTGCTCATA TTAAATCTGACAATCAGCTTCTTAATTTAAATCACATTGATTTCATATCTCATTATAGATCATGTTGAAGTATTCTGTTC AGTTCTAACTCAACATGATGAAAATCTTCCTTTTACTTCTTTTTTACCCTTTGCAGTACTCATGTACATCGTTTTACTTG ATAATTGATAGTTTTGGCAAAGGGAGGCAGAAGGTTTAAAGCAGCAAGTGCAGAATCTACAAGAAAACCATAGGTACAAC CTTTTTACTAATTTATTCAGAATTTTATTTTATAACTCTACTAAGTAAATAAAACAGGTACTCTTCTGGAAGCACGTCTC AGACAAGAAGGTATTACCATACTATATAGTAGGTGGCTGTGAACACTCTTGTTCCTCCTTTTCCTTTTTTATCAGAATTA CATAAAGCGAAAGAAAAACGAAACCTTGCCAATCCCATGATTATGCACACAAGTGACATAACAATACTATTGAATACAAA TTCTACCTTAGAGCTTCCACATCAATTAAGCACATTAGGCAACACACCCAAAGATATACATACAAACATTCTAATAGTGG TGATTAATACAAGAGAATGAATTTGCATATGACATTAAGCTATGTGCAAACATGCATTTTTGCTAATAATGGTGACTAAT TTAAGAGAACGAATTGACATATCTCATTAAACTCTGCATTTGAGGACACAGGCAATTGCTTGGAGAACAGCTCTATGGTT TGAGTGTGAGAAACCTACAGGATCTAGAGAATCAACTAGAAATGAGTCTCCAAGGTGTCCGCATGAAAAAGGTCAACTAA CTTTTAGATTCACACTGTGAAGGAATGAAGATATATGTGCTTGATTGATTAATGACCCGACTAACATAGACAGCAATTGA CAATTTTAATCAAATTCTGCAGGAAAATACTCTGACAGATGAGATCCAAGAGCTGAACCGAAAGGTCTTTCTCAGCCATC ACCTTGAATCAGCTAATTTTCCTCTAAAAAAATTCATAACACTGACAGACTTTATGTTTCAATACAGGGAAACCTCATAC ATCAGGACAACATGGAGCTTTATAAGAAGGTAAACCTCATTCAACAAGAAAACAAACAACTACGCAAAAAGGTAGCAAAG ATTGTTAAATCAAAAGAGCCTTATATTTAACCATGCAGTGTGACAAAAGAAAGCACAGCTGCATAGATAAATCTCCGCAA CACACTCTATTGAGCACACTCTCTACGATTGGTCTATTTCTTAAAATATCAGCGCAATTATAGAGATTGTGTTCAAAAGT ATGTGTGACTAACTAGTATTTCTCAAAAAGCACATATTGGTTAACAATGAGGGTTCATGTCCCAGGTGTATGGCACAACT GAAACGGCGACAACGAGCAGAAATCCATTTGTTCTGTTTCCAAATGCAGGAGGGTATCCACAATCAGTGGTCCAATTTCA GTTAAGCCCGCCTGAGCAAGAAACATCAGGCAGTGCCACAATTTGAAGGTTGTGGAGTGATATTTCAGCAATACACTCAG AAAAATATAATGATGATATTGCAATTTGCAGCTTAATAAGGACATCAAATGAAGTGAAGGTTCATCTGGTATAGATGAAT AGTATACTAATCACAAATCCCACAAGAGAAGCCTTAATGTAGTATTATTATCTGAAATTGGATGATAAAAGCTTATTATT ATCAGTACAAGAACATTTTCATGTATAATTGCATATGCAAAATATCGAATAAAATCTTCCTTTTCGTGGCTTCACGCACC TAGCTGCAAATGCACACTCACCAGTCACCTCAGCACGTAACGATGCTGTCCATTCATCAGAAAGAGGGATTTATATAACC TAAACGGGCTCTTACTCTCCTATTAGTTTCGATCAGCATTTGTTTTGTGGAATAGTTGTTTCTTCATGAAATGAATAACA CGAAGTGAAATTGTTGAATTAGAGCTCGTTTGGGTACCACCTATTTTCTTGTTTCCATTAAAATAAGTGTATTTTTCAAA TTTTAAAAAGTGTGTTTAGAAAATGTATGTTATAAATACATTTATGTTAAGTTGTGGAGGTTTTGCGGGATGGTAGGCTG TCCTTCCATGAGCTTGCCTCGGATTTTAGGGAGCTCCAACTTATTTTGGATCGAGATTGGCATGTCCAACTTCTCCATAT TCCTCAAACGGTTAATGATATAGCGGATTGTTTAGCGAGTTTGGGTTCAGAGCGTCAGTGTTCATACACTAGGTTGGAGG AGCCCCCTCCTCAACTTCTTCCTGTTTTAGCTAGGGATCTCCTAGCTTTATAGTGTCATTTTAATTTTCCGATGTAAAAA AAAAAATATACAATATTACCCATTTTGAAACTTTGCC 

CDS sequence (LotjaGi2g1v0330100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAGAGGGAAGATTGTGATTCAAAGGATCGACAACTCCACGAGCAGGCAAGTGACTTTCTCAAAGAGGAGAAAGGG ATTGATCAAGAAAGCCAAAGAGTTAGCCATCCTCTGTGATGCCCAAGTTGGACTTGTCATATTCTCCAGCACAGGAAAGC TTTATGAATATTCAAGCACCAGCATGAAATCAGTGATCGAGAGATATAAGACATGCAAGGGGGAACATCAACTAATAAAT CCAGAATCTGAAGCCAAGTTTTGGCAAAGGGAGGCAGAAGGTTTAAAGCAGCAAGTGCAGAATCTACAAGAAAACCATAG GCAATTGCTTGGAGAACAGCTCTATGGTTTGAGTGTGAGAAACCTACAGGATCTAGAGAATCAACTAGAAATGAGTCTCC AAGGTGTCCGCATGAAAAAGGAAAATACTCTGACAGATGAGATCCAAGAGCTGAACCGAAAGGGAAACCTCATACATCAG GACAACATGGAGCTTTATAAGAAGGTGTATGGCACAACTGAAACGGCGACAACGAGCAGAAATCCATTTGTTCTGTTTCC AAATGCAGGAGGGTATCCACAATCAGTGGTCCAATTTCAGTTAAGCCCGCCTGAGCAAGAAACATCAGGCAGTGCCACAA TTTGA 

Protein sequence (LotjaGi2g1v0330100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGRGKIVIQRIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGLVIFSSTGKLYEYSSTSMKSVIERYKTCKGEHQLIN PESEAKFWQREAEGLKQQVQNLQENHRQLLGEQLYGLSVRNLQDLENQLEMSLQGVRMKKENTLTDEIQELNRKGNLIHQ DNMELYKKVYGTTETATTSRNPFVLFPNAGGYPQSVVQFQLSPPEQETSGSATI 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles 1 61 61 30.922
SMART 1 60 60 1.1E-38
PANTHER 2 172 171 1.6E-85
PANTHER 2 172 171 1.6E-85
SUPERFAMILY 2 87 86 7.98E-33
CDD 2 77 76 4.16693E-46
PRINTS 3 23 21 1.4E-27
ProSitePatterns 3 57 55 -
Pfam 10 57 48 8.3E-25
Gene3D 13 107 95 1.9E-29
PRINTS 23 38 16 1.4E-27
PRINTS 38 59 22 1.4E-27
Pfam 82 169 88 1.9E-25
ProSiteProfiles 85 175 91 13.526
Coils 85 112 28 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function RNA polymerase II regulatory region sequence-specific DNA binding Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Biological process Positive regulation of transcription by RNA polymerase II Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0330100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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