Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0332400 |
| Transcript ID | LotjaGi2g1v0332400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT4G17870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q8VZS8|PYL1_ARATH Abscisic acid receptor PYL1; TrEMBL-Plants: tr|G7KF38|G7KF38_MEDTR Abscisic acid receptor PYR1-like protein; Found in the gene: LotjaGi2g1v0332400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80834574..80836794) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTCTAAATTTCTATATATAGCTTATCCAGCGTGGGAGGGAACAGGGTCTCACTCCTTGAATTTCCAATACTACCCCT CTCTGTCCCTCAAAATCTCCACTCGCAAGAGCGTCCCCCACACACTCTCTCTCTCCTTCCCTCACTCTCGCTTTCTCTCT CCTCCACATGGAGACCACCTCTGCCGCCGCCTCCACCTCCGATCACCAGCAAGGTTCCGACGACAAGCACCTCACGCAGC ACCACCTGACTCCCCCCTCAGGCCTCACCCCCGACGAGTTCGCCTCCCTCATCCCCGCCGTCACGGAGCACCACACCTAC CTCACAGGCAACGGCCAATGCTCCTCCTTACTCGCCCAACGTATCCACGCGCCACCAGACGCCGTCTGGTCCGTCGTCCG CCGCTTCGACAAGCCACAGTCCTACAAACACTTCATCAAAAGCTGCGCCGTCAAAGACGGCTTCCAGATGACCGTTGGCT GCACCAGAGACGTCAATGTCATCTCCGGCCTCCCAGCCGCCACCTCCACCGAAAGACTCGACCTCCTCGACCAAGACCGC CGCGTCACCGGGTTCAGCATCATCGGCGGCGAGCACCGCCTCAAAAACTACCGCTCTGTCACCTCCGTTCATGGATTCGA CGACGGTGCCGGTAAGATCTGGACCGTCGTTCTCGAATCCTACCTCGTCGACGTTCCCGAGGGGAACACAGAGGAAGACA CTCGCCTCTTCGCCGATACGGTGGTGAGGCTCAACCTTCAGAAGCTCGCTTCCGTCTCCGAAGGGAAGAACCGTGACGAT GACGGTAAGTAAGTCACAGTTCTTTAACGTGAAAATTGAAATTAGTCCCCCAAAATTCAAAAATACAAGAAAAGGGATTG AAATTTGATGAATCCAAGTTTCGGTCCCTCATCAATACATAGAAGGAGAAAAACAAAGGAAATCACCAGTTTTTCTCTCT TTCTTTTATCTTTTTTTTTATTGAGTGAGACTTCAGTTCTAATTTTGTTATTGATGATTTTTCTTCCATTCTTCTTCTTC TTCTTCTCCCTAATGCTTTGAAATTTGTTATTGCAATGGGTGAGGGCATTTCGGTCAATGTGCTTGTATAGGAAATGTTG ACTATGGATGGATGTTCATGGTGAAATGTGAATATCATTTGCTTTCTGCTTTTCATCTTCTTGATTATATTCTGTTTAAA TATATCTTTATTTTTTTAATTCCCTTTTTACTGCTATAATTAAGTGCAATCTTGATTAAAGAAGATGCTTCCTTATCTAG GTTATAGGGGTGCTTGAAAATCAAGTGATTTTGCTCTATAATGTAAAAAATTGTTCTATTGAATAGGACCAAAGCAACAT TAACTTTTCCTCCATGAACATGGCAAATTGTTATAAAATTTTACTATGGATAAATCATGGCAAATTAAAGAAAAAAATAT GAAATTTCTCCATTTTTAGATAGGTATGACAGAAATTACCTTATTTCAATAGATGAAGTTTTGTTGGAATTTTTTTACTT TCGGTTCGAATCTTTTATGAAACCATTTGAAATTCCATTTCGTTGGGTCCCAGTTGGTCTCTTCAGATGCAGTATCAATC ATGTGTTGATGATGTACTATTATCATTTTTTTTAAGGATAATTTAAGATTTCATTCATCAGTGCTAGGATCACTTTCCAT AGGCATAATAGGTAGAAGTAATACAACTGGGAGTGTCCTCTATCCACTCTTGATTGATAAAGAGAATTTAGCTAGAAAAT GAGTAGCTGAGTTAAGGTTTCTACTAACATGATTTAAACAAAAGAAGAGGAAACATGGTAAAGAATGTGTTCATCAAAAT AACTATCAAAGAATGGTAAGGTTCCTAGCACTGTTGAAACATGGTAAGGTTCCTATTAGCATTTCTGGTGCTAAGGAATG TGTTCATCAAAATAACTATCAAAGAATGGTAAAACATAAGTAAAGACGAATCGATGCTACACATAACACTTCAATCTAAC GTCATACATTTGGCGTAACTATGAAGGTTGAATATGAGTAACTGTCTAGACTATGAAGGTTGAATATGAGTAACTGTCTA GACTATGAAGGTTGAATATGAGTAACTGTCTAGACTATGAAGGTTGAATATGAGTAACTGATTCTAGACGTGGGCAAACG CTTCTCCACTTGTGAATACTTTGAACCTATGCTAACGGACATGATTGACGTGAATTCAAAT
CDS sequence (LotjaGi2g1v0332400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACCACCTCTGCCGCCGCCTCCACCTCCGATCACCAGCAAGGTTCCGACGACAAGCACCTCACGCAGCACCACCT GACTCCCCCCTCAGGCCTCACCCCCGACGAGTTCGCCTCCCTCATCCCCGCCGTCACGGAGCACCACACCTACCTCACAG GCAACGGCCAATGCTCCTCCTTACTCGCCCAACGTATCCACGCGCCACCAGACGCCGTCTGGTCCGTCGTCCGCCGCTTC GACAAGCCACAGTCCTACAAACACTTCATCAAAAGCTGCGCCGTCAAAGACGGCTTCCAGATGACCGTTGGCTGCACCAG AGACGTCAATGTCATCTCCGGCCTCCCAGCCGCCACCTCCACCGAAAGACTCGACCTCCTCGACCAAGACCGCCGCGTCA CCGGGTTCAGCATCATCGGCGGCGAGCACCGCCTCAAAAACTACCGCTCTGTCACCTCCGTTCATGGATTCGACGACGGT GCCGGTAAGATCTGGACCGTCGTTCTCGAATCCTACCTCGTCGACGTTCCCGAGGGGAACACAGAGGAAGACACTCGCCT CTTCGCCGATACGGTGGTGAGGCTCAACCTTCAGAAGCTCGCTTCCGTCTCCGAAGGGAAGAACCGTGACGATGACGGTA AGTAA
Protein sequence (LotjaGi2g1v0332400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METTSAAASTSDHQQGSDDKHLTQHHLTPPSGLTPDEFASLIPAVTEHHTYLTGNGQCSSLLAQRIHAPPDAVWSVVRRF DKPQSYKHFIKSCAVKDGFQMTVGCTRDVNVISGLPAATSTERLDLLDQDRRVTGFSIIGGEHRLKNYRSVTSVHGFDDG AGKIWTVVLESYLVDVPEGNTEEDTRLFADTVVRLNLQKLASVSEGKNRDDDGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| PANTHER | 22 | 211 | 190 | 2.0E-105 | – | |
| PANTHER | 22 | 211 | 190 | 2.0E-105 | – | |
| Gene3D | 31 | 208 | 178 | 7.7E-81 | ||
| CDD | 58 | 205 | 148 | 1.33195E-30 | – | |
| SUPERFAMILY | 58 | 203 | 146 | 5.0E-29 | – | |
| Pfam | 63 | 205 | 143 | 3.3E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0332400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…