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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0353100 |
| Transcript ID | LotjaGi2g1v0353100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier family; TAIR: AT2G17270.1 phosphate transporter 3;3; Swiss-Prot: sp|Q7DNC3|MPCP1_ARATH Mitochondrial phosphate carrier protein 1, mitochondrial; TrEMBL-Plants: tr|I1LID1|I1LID1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0353100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82942657..82944986) extracted from Lotus japonicus Gifu genome v1.2.
GTCATGGCCATGGATGGAAGAATCTGCGAGAAATTAACGGCCAGATACTACGCCCTTTGTGCCATTGCTGGAACGATCAG TGCTGGTACCACTCACCTTGTCACCACTCCTCTTGATGTCTTGAAAGTCAATATGCAGGTGCATTTCTTCGATTCCATTT GTTCTTCACACCCTGTTTTGCTTTGTTTGATTAGAGTGAGGATCGCTTTACACTTTTGTTGTGTATCAAAATGTGGGAAA TTTGAGTTTTTCGGCTACCCTTTTTTGAGAATGGATTCTAACCCTAATTTGCTGTAACAAGAAGTGGAAAAGTTGAATTT TTTTGGCTACCCTTTTTGAGAATGATTTTTAGCCCTAATGCAGTAACAACAAGAAGTGGAAAAGTTGGATTTTTTTGGCT ACCCTTTATTTGAATGAATGTTTTCCCTAATGTTTAGGACTGACCATGTTGTTGATTTGATCATATTTGTTGATGGGGCA AGTGATTTTGTTACTTGTAGGTGCATCCTGTTAAGTATTACAGCATTTCAACTTGCTTTACGACGTTATTGAGGGAACAA GGGCCTTCTGTTCTTTGGAGAGGTTGGACTGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGATGTAGATTTGGTTTATA TGAATATTTCAAGGGGGTTTATTCCAATGTGTTGGTGGACCAGAACAGGAGTCTTGTTTTCTTTCTTAGCAGCGCGTCTG CTGAAGTATTTGCCAATTTAGCTCTGTGCCCGTTTGAAGCTGTTAAAGTGAAGGTTCAAGCACAACGCAGTTTCGCAAAG GGCTTGTATGATGGCTTTCCAAAGTTATATGCATCAGAAGGCATGCGAGGGTAAGGAGAGATTCAATATGTTAGTTTCCT GCTTTGTGTGCGTCTGTCTTTAGGGGAAGATTATGATTATTTATCTTCTATTCTGTGTACTGCTTGCAGATTCTACCGTG GACTTGTTCCACTTTTGGGCCGAAACCTTCCATGTAATTTCATAATCTCTTGAAGCTTTTTTCATGCTACAATAGTTAGG GCAGTAAAATTTTATATTTAAAAAGTAAAGAGTCATCATCAGTGCTATTTCTACATCTGTATCCTCGTTACCCTTATACT TTGTGAAATCTTCCATAACTGCATATCAGGATTTTTTCTGATATTTTAACATACTGTCTTACTCTGTAGATGTGTTTCAG TATCTTTACTTTGTCATTCCTGCTCTGCCTAGGCTTTGTTTATGAGTTTTTAGGGGAGGAGAGGGGACAGCTTTGAGGGG AAAGGGAGGGGAGGGGAAGAGAGGGGAAAGGGGTGTAAGCCCTCCTTTCGTTTGGAAGTTCAAAATTTCACAAAATCCCC CAAGTTGGGGGAACTCCACAAAGTAATTATAGGAGGGTCTTTGAGGGGTTTTCATAAACTCCCCAAACCCTTCCCCCCCT TAATAAAAATCTCCCAAACAAGGGGAGGGCTTCTCATAAGCCTCCCTCTTCCCTTCCCTCCCCTTCAAATCTCAAATTGC AAACACAGTCACACCCTTAGTGTCCGGTAAAAATTGTATTTCCAATCATTATGTTATCATTACCACATTGTACCAGTTTA ATTTGACTGATTAGGATTGCTTTTCATCAATGAAATAGCAAAAGATGTTGAATAATAAAATAACAATAGACTTCTTCAAA GCTAAGCATGCTGAGTATTCAATTATACTATGGGACTATGTTCTGGAAATAATTAATTTTACTACTCTGATCTAGCATGG TGATGGAAAGTTTCAGTGATAGTTAGATATAACACTTGCAGTTGTCCATCTATGAACTGTATTAATTGTTCATCTGTATT TTTGGCAGTTTCCATGGTTATGTTCTCAACATTCGAACATTCAGTTGATTTTTTGTATCGTAACGTTGTCAAAAGAAAAA AGGAGGACTGTTCAAAAGCTCAACAGCTTGGTGTGACATGTTTAGCTGGATACGCAGCTGGATCTGTTGGTAGCTTCATT TCTAACCCCGCTGACAATATTGTGGCTTCTCTTTATAACAGAAAGGCTGATAGTCTTGTGCTGGTATATGTTTCTTTACA TTTGGTTAATGATACTTCCTTGAGAGATCAAAGCCCTTGTACTCAATGTGCTCCTCTCTTATTGTGCGCAGGCTGTCAGA AGAATTGGGCTAGCCAATCTATTTACCAGGAGCCTTCCTATTAGAATGATGCTGGTCGGTCCTTCTATAACATTGCAATG GTTTTTCTATGACACGATCAAAGTTTTAGGTGGACTGTAAGTATACTGCTCTCTAAACTTTTAAGTGATATTTATAAGTT TGCTTTGTAG
CDS sequence (LotjaGi2g1v0353100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGGATGGAAGAATCTGCGAGAAATTAACGGCCAGATACTACGCCCTTTGTGCCATTGCTGGAACGATCAGTGC TGGTACCACTCACCTTGTCACCACTCCTCTTGATGTCTTGAAAGTCAATATGCAGGTGCATCCTGTTAAGTATTACAGCA TTTCAACTTGCTTTACGACGTTATTGAGGGAACAAGGGCCTTCTGTTCTTTGGAGAGGTTGGACTGGCAAGTTCTTTGGC TATGGTGCTCAAGGAGGATGTAGATTTGGTTTATATGAATATTTCAAGGGGGTTTATTCCAATGTGTTGGTGGACCAGAA CAGGAGTCTTGTTTTCTTTCTTAGCAGCGCGTCTGCTGAAGTATTTGCCAATTTAGCTCTGTGCCCGTTTGAAGCTGTTA AAGTGAAGGTTCAAGCACAACGCAGTTTCGCAAAGGGCTTGTATGATGGCTTTCCAAAGTTATATGCATCAGAAGGCATG CGAGGATTCTACCGTGGACTTGTTCCACTTTTGGGCCGAAACCTTCCATTTTCCATGGTTATGTTCTCAACATTCGAACA TTCAGTTGATTTTTTGTATCGTAACGTTGTCAAAAGAAAAAAGGAGGACTGTTCAAAAGCTCAACAGCTTGGTGTGACAT GTTTAGCTGGATACGCAGCTGGATCTGTTGGTAGCTTCATTTCTAACCCCGCTGACAATATTGTGGCTTCTCTTTATAAC AGAAAGGCTGATAGTCTTGTGCTGGCTGTCAGAAGAATTGGGCTAGCCAATCTATTTACCAGGAGCCTTCCTATTAGAAT GATGCTGGTCGGTCCTTCTATAACATTGCAATGGTTTTTCTATGACACGATCAAAGTTTTAGGTGGACTGTAA
Protein sequence (LotjaGi2g1v0353100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMDGRICEKLTARYYALCAIAGTISAGTTHLVTTPLDVLKVNMQVHPVKYYSISTCFTTLLREQGPSVLWRGWTGKFFG YGAQGGCRFGLYEYFKGVYSNVLVDQNRSLVFFLSSASAEVFANLALCPFEAVKVKVQAQRSFAKGLYDGFPKLYASEGM RGFYRGLVPLLGRNLPFSMVMFSTFEHSVDFLYRNVVKRKKEDCSKAQQLGVTCLAGYAAGSVGSFISNPADNIVASLYN RKADSLVLAVRRIGLANLFTRSLPIRMMLVGPSITLQWFFYDTIKVLGGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 290 | 288 | 3.6E-183 | – | |
| PANTHER | 3 | 290 | 288 | 3.6E-183 | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| ProSiteProfiles | 14 | 98 | 85 | 22.02 | ||
| SUPERFAMILY | 15 | 283 | 269 | 1.03E-55 | ||
| Gene3D | 17 | 288 | 272 | 1.5E-47 | ||
| Pfam | 19 | 100 | 82 | 5.0E-18 | ||
| ProSiteProfiles | 107 | 191 | 85 | 21.161 | ||
| Pfam | 113 | 195 | 83 | 4.0E-16 | ||
| ProSiteProfiles | 208 | 287 | 80 | 10.649 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0353100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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