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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0370200 |
| Transcript ID | LotjaGi2g1v0370200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-binding protein, putative; TAIR: AT5G59830.1 DNA-binding protein; Swiss-Prot: sp|P0CS93|GAOA_GIBZA Galactose oxidase; TrEMBL-Plants: tr|I1LK58|I1LK58_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0370200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86718308..86721938) extracted from Lotus japonicus Gifu genome v1.2.
CAATCCTACATTCCCTGGACGAGAAAAAGATCGAGTGCTCCTCTCCTCACGCACCTTACCCTATCATATGAATCTCTCCT CTCTTTGAAAACCGTTCGGCGTTCACCACCGCCGGAAAGATTCTCCGATTAGGGTTCCGGCTATCTCTGATTATACCGAT CGCCGTACCTTCCCGAAGCTCAATTGCTACTATCAGTATTGTGATTTCACCCTTTGCCTAGGTAACGCAATAACGCAATT CCTGAGCTTGAATGTTGGAAATTGTTTAATTTTTTCTTTGAATTTTTTTGGTAAATAGTAAATACCTTTTGTTTGATAGG TATTGAGCATTGTATATTCTTCTTAATTAATTTTTTTTTAATTTTATTGGATTTGTTTTTACTTTGTTTCTTTGTTGATC TTGAAGGATGTGTGTGAACTGTGCATGCTTGTTGCAGGAAATGCTTTGAATCACTTTGGAAACTAAGATAAATTGTTACT TGAGAATCAGCTGCAGGATTTTTCAGGGATATTTTTCACATGCAAGAGTTCAAGCAAATGGTATTTGTAGTTATTAGTTA TATCTGGATTGAATAGATTCTGCCTTGTTTGTTCTTTCTTTCAGCTTGCATTATGTTAGTTTTTAGGAGTTAAGTCTAAT CAAGTTCGAGTTGGATAGTAAATGTTGCTTGGTGCTGTTGTGTGTGTGTGTTTGTTTGGAAATTGGAATCATTATGATGC TTCCTTGCCCTTTTGGAGAGGGGGTTTTGAGGATTTGAGGTGTATGAAGTATAAGGTATACACAAATGACATGGGGCACG TCACACGGAAAAATCTATATCGTGAGGATTAAATTGAGGGGGCTCAAGTCTCAACCAAGGATGAGAGAAGCAATGGTTGA TAAAATATATGCACATTTAGAACACAACAATGTATTTTTTAGAACTCAATTTCAATCCCTTGATTTTCTGACTGATAGTT CATACCATTTGCTTTTTCTTCTGAAGTGGACTCTTTGCCTTTACTTTGAAGGACCAAGTTCATATCATAAAGGACATGAT AGGCTTCATGTAATTAGATAAACTATAAGGCAATATGTGCATTATATGTGTAACATAGTTGTTTTTTTTCCTGCAGTCTT TACAAAACAAGGGATTTTTGATGGTTAAGGGACACATTAATGATAGAGAGACAGTATTTGATAATCCTTCAAAAATTGAA CCAAAACGACCTCATCAATGGCTCGTCAATGCTGCTGAAGTAGATCTTTTTCCAAACAAGAAACAAGCAGTAGAAAATGT AAGTGAAAGAACTAGTTCAGGATTTTCAAATGAAAATTTGACTCCCTGGCAGAACAGTCCCAATTTTCATTCAGTCCAAA ACCATTTTGTTGGTCGATTATTTGGGTCTGGAACTAAGTCTAACAATATCCCTGAAAAGAATACTTCATATGTATCGGCT GAGGATTCTAATGTGAAATCAAAGTTGATCACCAATCCATATGGAGGTGATGCATCTTTTGGCCTGTCTATATCTCATTC TGTTGAAGATTCTGAAGCATGTACAAATTCTGGTGGATTTAAAAGAGTCAAAGTAGGTCAGATTAAGGATTCTGATGATG TACAGGCTCCAGAGAGGCATAATTATAATAGGCAAAGTAATGGGGATCTATATCAGACCTATAATGGCCAAGTTGATACA AGGTCAGCGTCAATAGGGCAAGTCTTTGAGAAGGATGGCAATATCACTTTAATGGGATTCCCCTACAGCAGAGGAGATGC CCAAGTCAGATCATTTGGCGCCCCCTTTGGCAAAGGAGATGATGTAGTCATATCAAGTGGCGAATCCTATAATAAAGAGA ACACAAACATAATTTCTTTTGGTGGGTTCCCAGATGAACAGAACATTATCTCTGTGGGCAGGCCTGCTACAGACTATGAA CAATTATATAATCAATCTTCAGTTCATTCTTCGACAACAGCCTATGAGAAAGAGTTGGGTGCATCAAACTCTGATATAGT TGCAAGTACTCCTCAGGTAGCAAGAGCAAAGTCTGAAACTGTTCCCAAGAATAAACAAGAGTTCAAAACAGCAAAGAAAG AAGCTCCCAACTGCTTCCCTTCTAATGTGAGAAGCTTGATATCAACTGGGATGCTTGATGGCGTTCCTGTGAAGTACGTC TCAGTGGCAAGGGAGGTAAGTTTTGGTCTTTGTTGTTAATTATTTAAATTTAAAGTGCTGCTTAATAAGTTATATTCCTT TATTGCTGAAGGAACTTCGTGCAATTATAAAAGGTTCCGGCTATCTTTGTGGGTGCCAGTCATGTAACTATACCAAGGTT AGTACGTCATCGGTCAAACTCCTTCATAAGATTTTTCAATTTCTTAAAATCTGTGATAGCTTACTTATTGCCTGATACTA TACATTTTCAGGTTCTGAATGCTTATGAGCTTGAGAGACATGCTGGTAGCAAAACGAAACATCCAAACAATCACGTTTAT TTTGACAATGGGAAGTCCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTTTGTTGTTTGATTCAATTCA AACAATTTTTGGCGCACCAATTAATCAGAAAGCATTTCACAGTTGGAAAGGTAAAGAAATTCCTTCCTGTCCACCTTAAC ACTGACACACTCGCCCCTGCATAAACTAGTTTTTTCTTGTTGGGATCATTTGGTAATTGACTTACTCTTTTTTCCCCCTC CTGCCAACTTTCTTCAGAATCATTTCAAGCAGCTACACGTGAGCTTCGACGCATTTATGGAAAGGAAGAACTTAACCTAT AAGTCCCAAACTTTTGTTAAAATGTAACTTCGGTTAGATTCTAGTGTGCATAGTAAGATGTATCAGTTTTCAGTATGATC CCTATATCTTTTTCTGGCTCAGTGCGTTGTGTACCTTTGTGGCCTTGCTTAGTTTATTGGAGCTTTATGTAGCTCTTGTA CAGATCAACGTTATTAATTGCTTTGGACAGAAATTATCTAGTACATTATCGAGGAAGCTAATGTTATTGCGTAGTTGAAG GAGCAAGAGTGCAAAGAGTTGTTAGTATTGGGACACTGATTGGGCTCGTAAAGTGCTATGTAACTATTTGGATTTTTGTC CAATTATACGAGGTAAATTCACTTGAGCACTTCAATTGTTCCTTTTTTTTTTGGCAGTGGATTATAGAGAGGAAGATGGA TAGTTACTTTGAAGGGCAAATAATTTCCGGTTGCTTGTGCTTTTGTACGTTTTGCGTGAACAAGTGAAGTTTGTTGGGCT GAGTTGGTGCAGCACAATATTGTTTCTGGGAAGAAAAGTAATGAGTCATGATGAACATTCATGAGATCTTTCATTCTTGA GAACATTTCTAATTCTAATGAATATGTGACGAATTTATAAGTATTGTTTTTTTATTAACTTGAGGGCGAAAATCCGAAAC AAATTACAAGCTACAGCCTACAGTAGCCTGTATAAACTGCATGTTTAAATTTTTTCTACAATTGATTATGAAGTTAAAAT CAATTATGGTGAGAAGCTTTTGTGAATAGTTTTAAGTACTAAAATTGATTGAGGCAAAAGAAGTTCATTCAAACATATTG TAGATATTAGAAGCAGCATAATACATACAAG
CDS sequence (LotjaGi2g1v0370200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGAGTTCAAGCAAATGTCTTTACAAAACAAGGGATTTTTGATGGTTAAGGGACACATTAATGATAGAGAGACAGT ATTTGATAATCCTTCAAAAATTGAACCAAAACGACCTCATCAATGGCTCGTCAATGCTGCTGAAGTAGATCTTTTTCCAA ACAAGAAACAAGCAGTAGAAAATGTAAGTGAAAGAACTAGTTCAGGATTTTCAAATGAAAATTTGACTCCCTGGCAGAAC AGTCCCAATTTTCATTCAGTCCAAAACCATTTTGTTGGTCGATTATTTGGGTCTGGAACTAAGTCTAACAATATCCCTGA AAAGAATACTTCATATGTATCGGCTGAGGATTCTAATGTGAAATCAAAGTTGATCACCAATCCATATGGAGGTGATGCAT CTTTTGGCCTGTCTATATCTCATTCTGTTGAAGATTCTGAAGCATGTACAAATTCTGGTGGATTTAAAAGAGTCAAAGTA GGTCAGATTAAGGATTCTGATGATGTACAGGCTCCAGAGAGGCATAATTATAATAGGCAAAGTAATGGGGATCTATATCA GACCTATAATGGCCAAGTTGATACAAGGTCAGCGTCAATAGGGCAAGTCTTTGAGAAGGATGGCAATATCACTTTAATGG GATTCCCCTACAGCAGAGGAGATGCCCAAGTCAGATCATTTGGCGCCCCCTTTGGCAAAGGAGATGATGTAGTCATATCA AGTGGCGAATCCTATAATAAAGAGAACACAAACATAATTTCTTTTGGTGGGTTCCCAGATGAACAGAACATTATCTCTGT GGGCAGGCCTGCTACAGACTATGAACAATTATATAATCAATCTTCAGTTCATTCTTCGACAACAGCCTATGAGAAAGAGT TGGGTGCATCAAACTCTGATATAGTTGCAAGTACTCCTCAGGTAGCAAGAGCAAAGTCTGAAACTGTTCCCAAGAATAAA CAAGAGTTCAAAACAGCAAAGAAAGAAGCTCCCAACTGCTTCCCTTCTAATGTGAGAAGCTTGATATCAACTGGGATGCT TGATGGCGTTCCTGTGAAGTACGTCTCAGTGGCAAGGGAGGAACTTCGTGCAATTATAAAAGGTTCCGGCTATCTTTGTG GGTGCCAGTCATGTAACTATACCAAGGTTCTGAATGCTTATGAGCTTGAGAGACATGCTGGTAGCAAAACGAAACATCCA AACAATCACGTTTATTTTGACAATGGGAAGTCCATTTATCAAATAGTACAGGAATTGAAGAGTACCCCTGAAAGTTTGTT GTTTGATTCAATTCAAACAATTTTTGGCGCACCAATTAATCAGAAAGCATTTCACAGTTGGAAAGAATCATTTCAAGCAG CTACACGTGAGCTTCGACGCATTTATGGAAAGGAAGAACTTAACCTATAA
Protein sequence (LotjaGi2g1v0370200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQEFKQMSLQNKGFLMVKGHINDRETVFDNPSKIEPKRPHQWLVNAAEVDLFPNKKQAVENVSERTSSGFSNENLTPWQN SPNFHSVQNHFVGRLFGSGTKSNNIPEKNTSYVSAEDSNVKSKLITNPYGGDASFGLSISHSVEDSEACTNSGGFKRVKV GQIKDSDDVQAPERHNYNRQSNGDLYQTYNGQVDTRSASIGQVFEKDGNITLMGFPYSRGDAQVRSFGAPFGKGDDVVIS SGESYNKENTNIISFGGFPDEQNIISVGRPATDYEQLYNQSSVHSSTTAYEKELGASNSDIVASTPQVARAKSETVPKNK QEFKTAKKEAPNCFPSNVRSLISTGMLDGVPVKYVSVAREELRAIIKGSGYLCGCQSCNYTKVLNAYELERHAGSKTKHP NNHVYFDNGKSIYQIVQELKSTPESLLFDSIQTIFGAPINQKAFHSWKESFQAATRELRRIYGKEELNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 469 | 462 | 2.8E-220 | – | |
| PANTHER | 8 | 469 | 462 | 2.8E-220 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0370200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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