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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0378400 |
| Transcript ID | LotjaGi2g1v0378400.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase family protein, putative; TAIR: AT1G63855.4 Putative methyltransferase family protein; Swiss-Prot: sp|Q6DJF8|MET23_XENLA Methyltransferase-like protein 23; TrEMBL-Plants: tr|K7K469|K7K469_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0378400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87541989..87545321) extracted from Lotus japonicus Gifu genome v1.2.
CCGCTTAGTGCCCTAACCGCGGGACGAGAAATTAGTCTCACGACGGTCAGGTGTGGGATACCTTGGTAAAAAAAAAAAAA CTCAAAAGACGAACAATGGCGCTGCGAATATTTCCGCGGGGCCAACATGGAAGAGAAAGATCGGGAAACCCAATCTGACG ACACCGTCTCCACCATGACCACGATTTCTCGGCACACATACGGCGATGATTTGTGCATCTCCGTCATTGAGGTCCTCCAT TTCTCACCCTCCACCACCGTGAACTCAAATCGCAACCTAACAAAAAACCCTTTCCTCCTACGCAGAACATGAAGGAGGAC TACGGCCTCTTCGTCTGGCCCTGCAGCGTGATTCTCGCCGAGTACGTTTGGCAACACAGGGAGCGATTCTCAGGAGCCAC TGTTCTCGAGCTTGGTGCTGGAACTTCCTTGCCTGGTTTGGTTGCAGCAAAACTCGGTGCCCGTGTCACTCTCACCGATG ATTCCAGTAGATTAGAGGTGATACCCTATAGCCTGCATATATTTCTTTCTTCAATTTGTGAATTTAGTTTTCAGATTAAT CGATTGCTGTGAAAATTGAAACCAAATCAAATGTTTTCACCTGTTCATACACTAGTTTTGTTGTATTTGCCAATGTTGGT CATGAAATGAAGCTTTACTCATATCAGAATGGCTGGATCCTGAAACTTGTAGTTCTCTGAGATGACTTGCTTCTTGTTTT GGATTTGCAGGTGCTTGACAACATGAGAAGAGTTTGTGACTTGAATAAACTTGAGTGCAATGTAAGCTATCATTGTTGTG AAGCCTGTGGTTAAAACTTGCCTTTCATGCTAATATTGTAAATTGTTATAGTATTGAATTTGAATATATAGCATGGATTT TCTTAAAGGGGGTGATTAAGCGGAAGAAGTATCCGACAACCATTGCTTATACAGTTATCTGTGTAAATGATGTTGAAATT TATATTTTTGTTGTATTTGTCTCTCTTTATCTGAATGTATTGCTTTCTATTTGAAGGTGCTAGGATTGACTTGGGGAGTT TGGGATTCATCCATGCTCAGTTTGAAGCCAACAATTATCCTAGGGGCTGATGTTTTGTATGACTCAAATGGTGAGAAAAT GGGCTGCTGTGTTATATATTTGTCACCTTCTTTTTTGGATTGGACTAAAGCGTTGTTTCGTTTATGTTGTTTAGCCTTTG ATGACCTTTTTGCCACTGTGACATTCCTGCTACGAAATTCTCCAGGGTCAACCTTTATCACTTCATACCATAATCGAAGG TATTTTTCATTCTCTGTGATGCTAAGAACTTGTGTGGCAAGCTTGTTCTAGCTATACAACATTAATCATTCATATGTTAA CTTTTGTTTCTATTTTTTAATTGAGCTATCTAATCATTTGCAGTGGACATCACCTTATTGAGTTCTTGTTGGAAAAATGG GGCTTAAAGTGTCTCAAGCTCATTGATGGGTTTTCTATATTGCCATCCTACAAGGCATCACAACTAAGTGGTAACATCCA ATTGGCTGAGATAGCACTTATCTCAAAAGACAACGCTTGAGGTAGCTCAAAAATTTTATACGAAAATTTACCTTTGTTTT GGTGATGCTGCTGCTACTATCTACTTTTTTCTTCTTGTTGATGATTAAACTGTTGCTGATGATTGCAATTATGATTATTT CCTTATATATACACTTACCATGGTTAGTTCTTCAGATGATCATTGCCTAGGTTCCATGGCAATATTGTTTGAGCTTTATT TTTCCGGTTTCGCCTATGCTTTTGCTTTCTTTCATTTGTAGTCCTACGCCCCGTCATGTGCCCCTGTTTTCTTTCTTTCA TAGTCACGTGCCACTTTTTAGGTTTTAGCTGCTATCGGTGTTGACCCAGTCCAAACTCCATTGTTCCTACTGTGACTGAG ATGGACACGCTTAGGACTGATGTTAATCCTTACATGGATTTCTAAACAAAACTGTCAATGTATTTAAATCTGTGGGGCCT GTTGTTGGGCAAAAGACTGAGTACAATGAAGATTATCGTCTTTCTGCTAGTGATATAAGGAGAATTTAAGGCAGCTAAAT AGGCTTTTTTTTTGCCACCAACATACACACCAACAACTCGACCATTTTCCTCTCCTGCTCTACTAGATTCTAGATTTTAG ATTCTGGTTCTTTTAATCATTTGACTGTTCATCATCCCCTTTTCACTAAATTGTCACCCCCTAAAATGTCTCACTCTACT ACTCTTTTTTATGGTTCTAAGGTATAAGCTGCTGGTTTTAGTTAAGCTTCACTGCTTCCATACCTTTAAATTCTGTATCA TTTGTACGTGGTTGTACCTTTAATTTAATATCAAACACCCAGCCTACTCGCACTTTAAATTGTTCCATAACCTTTAATTC TGTCTCCTTTCTTATACAGGATTGGAGTGTGGGACAGGAGATTGGAGCTGGATCCGAATCATGAGGCCTATTCTACCTCC AACCATATTCATCTGTCATACGTGCTCTTTTGAGTTTTCTGATCTTCCTTATCATCAAGGTCATCCAAGATTGGACAAAT TGAAGTGCATGGTTGAAGCCGTTAAGTTATGAATAGTATCAACTTGCTGCTCTTAATTTTTACCTATAAAATCATCCCTT CAATGAGCAGGGGCTACAAAGGTCATGTTGCTGAGCGGCACCTTTCCTCAGTTTCCTGCCTCGTTACTTTAGACTTCAAA AATGAAATTTTGTAACTGTGTTCTAAATCATTTTCCCAGGATAAGCTTTAGCTTAGCTTTTACTACATTTGAGATAAACA TACATATTTCTTTATGGAGGGAAAAAAGTATTAATCTTGCCATCTTGAAAATGTGATTAACCAGTGTCATACTTCTAACT TGACTTGGAATATCATAATTTAACTTGAATTAAATTAAGACTTAATCACTCTGCAGTTCTTCCTAATCTCTTGCCGCCAC TGATTCTACTCATGGTCTTCACAAAAGCCTCCAAGAAAGTTGTGACATGTGGAAGGTTGGCGCTGGTAATTATATGGTTT CACTGGCCTTAGATGTTCTTCCATCCTTTCTCCCTTTAGAAACATCCCATTTAGGTCCTCCAGGTCAAAACTTGCAAATG CATGTTACATATCTGTATATGCCAATGCTAAAGAACACAACAATTGTTTGAATCTCAATGATCAGAGTTTGGTAGTTAGC TTTTTTAAAAACTGCATCCATCCCTTGCTTCTAGAGCAAGGATATCAGCACATGAGACCACACCAGGGCATGAAGCTTCT ACTTCATTAATGACATAAAATGCATGCAAAGAAACAATTGGTGGTCCATCTAG
CDS sequence (LotjaGi2g1v0378400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGAAAGATCGGGAAACCCAATCTGACGACACCGTCTCCACCATGACCACGATTTCTCGGCACACATACGGCGA TGATTTGTGCATCTCCGTCATTGAGAACATGAAGGAGGACTACGGCCTCTTCGTCTGGCCCTGCAGCGTGATTCTCGCCG AGTACGTTTGGCAACACAGGGAGCGATTCTCAGGAGCCACTGTTCTCGAGCTTGGTGCTGGAACTTCCTTGCCTGGTTTG GTTGCAGCAAAACTCGGTGCCCGTGTCACTCTCACCGATGATTCCAGTAGATTAGAGGTGCTTGACAACATGAGAAGAGT TTGTGACTTGAATAAACTTGAGTGCAATGTGCTAGGATTGACTTGGGGAGTTTGGGATTCATCCATGCTCAGTTTGAAGC CAACAATTATCCTAGGGGCTGATGTTTTGTATGACTCAAATGCCTTTGATGACCTTTTTGCCACTGTGACATTCCTGCTA CGAAATTCTCCAGGGTCAACCTTTATCACTTCATACCATAATCGAAGTGGACATCACCTTATTGAGTTCTTGTTGGAAAA ATGGGGCTTAAAGTGTCTCAAGCTCATTGATGGGTTTTCTATATTGCCATCCTACAAGGCATCACAACTAAGTGGTAACA TCCAATTGGCTGAGATAGCACTTATCTCAAAAGACAACGCTTGA
Protein sequence (LotjaGi2g1v0378400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEKDRETQSDDTVSTMTTISRHTYGDDLCISVIENMKEDYGLFVWPCSVILAEYVWQHRERFSGATVLELGAGTSLPGL VAAKLGARVTLTDDSSRLEVLDNMRRVCDLNKLECNVLGLTWGVWDSSMLSLKPTIILGADVLYDSNAFDDLFATVTFLL RNSPGSTFITSYHNRSGHHLIEFLLEKWGLKCLKLIDGFSILPSYKASQLSGNIQLAEIALISKDNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 14 | 194 | 181 | 4.8E-39 | – | |
| PANTHER | 15 | 222 | 208 | 2.1E-77 | – | |
| PANTHER | 15 | 222 | 208 | 2.1E-77 | – | |
| Pfam | 30 | 176 | 147 | 2.8E-20 | ||
| SUPERFAMILY | 42 | 197 | 156 | 6.81E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0378400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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