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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0379800 |
| Transcript ID | LotjaGi2g1v0379800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF630 family protein, putative (DUF630 and DUF632); TAIR: AT3G51290.3 pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632); Swiss-Prot: sp|P39054|DYN2_MOUSE Dynamin-2; TrEMBL-Plants: tr|G7JXJ4|G7JXJ4_MEDTR DUF630 family protein; Found in the gene: LotjaGi2g1v0379800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87647458..87651465) extracted from Lotus japonicus Gifu genome v1.2.
GCACAAAGCAACATCTCAGAACAGTACCACTACTTCCCAGTCCCACTGTTTTCTCTTACTCCATTGTTGCTCCTCCAACA CTTGATAGATTCATTCACACAAAACACAACCCCAACCTTAACTAAACTGCATTGTCTTGTCTTCACTCTTTCCAGATGAG TTTCTGATGCAACCACAAAACATGCAAGTGTTAGAGGAAATGGGTTAGTACAGAGTTCGAGGCATTCAAATGGGGTCAAA CTCAAAGAGTTAGCACAGTGAAAGTCAAAAAACCCAAAAGCTTTATTCCTCTGTTTGGTTTCCAAGGTAAGAAGAAGAAG AACGAACGAAAATGGGTTGCTGTCATTCCAGCATTGACAGGGAAGAAACGGTGTCGCATTGCAAGGCCAGGAAGCGTTAC ATGAAGCAGATGGTGCAAGCAAGGCACGCTTTTGCTGCAGCTCATGTCATGTACATTCGATCTCTCCGTGCAACTGGCTC TGCTCTGTTTCAGTTTGCAAATGCTGAAACTACCCTCCTCCGCCATAACCACCATCTCCCGCCGGAGCCTCAGCCCATTC TCCCACCGCCTCCGCCGAGAGCTCCGACCCCGATGCGACCTCCTCCGCCTCCGATGAGTCCGAGTTCGTATACATGGACA TCTGGGACTGCTTCCCCTGCTCTTCCTCCCCCTCCGCCGCCGATGGCTTCCTCCGGTTGGGATTTCTGGGACCCGTTCAT GCAGCCTCCGCCTCCGCCTTCTTCGAGGTCGGCGACAGAGGAGGAGTGGGAGGCGACTACCACAACTGGCTCTGAGGTGG TGGCTATGGGGAGAGGTGCGGCAGCGAATATGGTGGCTCCGGCGTCTGTGTCTGGAGGAGGGTTTTCCAAGGAGACCTCG AGTGAGCTTGCAGTGGTGGTGTCAAGGAACAACAAAGATCTTGTTGAGGTTATCAAAGAGCTTGATGATTACTTTCTCAA AGCTGCTGATGCTGGTGCTCAGGTCTCAATGCTCCTACAAGTTCCAACCTCTGGTTTTTCCGATCACAGTAAAGGAGGTA AGCCTTTACATGCATGTAACAAATTCTTGTAACCCTCTTTGAGATTTGCTTGTGGAAGTTAACAAAGCAAGCAAGGTTTC TGTTTTTTTTTTTCATCATTTGTTTGAAAGTCTTGAAAGAACAAAAATGAAAGAGATTGAACTGTGCATTTTATTGTATT CTTGTTCACTATTGATTGTGTTGTGTTTGTTGTGTGCTTGTTGGTTGTAGGTAAAGTGTATGGCTATGGATGGAGCCTGA ATCCATCTGTGTGGGCATGGGGTTCTAGTCCTAAACTGAATGGATTTGGCAAACTGGCAGAGACTTCTATTTCTGTTGGG AATTTTGGGGCTAATGGTGCTGGAAGTGGTGGCCACTGCTCCACTGTGGAGAGGCTCTATGCATGGGAGAAGAAATTGTA CCAAGAGGTTAAGGTGTGTTGCTTTCTTTTCTAAGAGCATAATTTTGATGTGGATCTTACTGAAGAAGTTTTGTTCTTTG CATCTTACAGTATGTGGATGTTTTGGTTTTCTACTATTGGTCATGTGTTCATTACTTAATTTTAGTTCAATTTTGCATTA ACTTCATCCTTTTGAGTTTCCAAAGCAAGATTGAAGAGAAGATAACTTATAATATATCTAAACCATTTTGAACAAACCAT GATTTTTTATTAGTTTCATTTGGTGCTTTGTTAATTCTTGTTAACCATTGCTTTAACTTCTTCAATGTTATTTTGGTTTG TTTAAGAGTGCTAAGACTGCAAAGATGGAGCATGAGAAGAAGGTAGCATTTTTAAGGAAGCTAGAGATGAAAAGAGCTGA CTATGTGAAGACAGAGAAGACGAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCTCAGGCCATCGAAA GCACATCTGCTGAAATTGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTGAAAGGGTTAGTCTTC TCATTTCTTATACTGCATTTCAAGTCCACTTCTTAATGTTATGTAATGTATATAACCTTGCATCACCAATGGGATAGTCA TGTGGTATAGTCCTGTGGTAAAGGAGGCTTGCATTTTGTTTAGTTGAAAACCCTATGCTATGAGGTTGCTGCTTGCTGAT GGGACATATTGGGTCAAAGTATACATGCTCAGCATGAGCAACAGTAAAAGATATTGCTTTTAACTGCTTTTAGATTTTTA CTGCTTAAAATTGTGTTTCTCACTTGTTTTTTGTGAAGACCAGCTTGATCCTCACCAACCCTTACAGTACAAGTACACTT TGTACTGCCAAAAACTCTTTCTTGACCAAGTGGGGTTCCTCTAGGATCAAGATTTACTGCTTACTATCTGTCTATTTTTT TGTTCATAAATCATGGTATCCTTTTTCCAATGCTTTGGGAACTCGTACAGCAAAACATAATTAGGGACAGGCTGAAAAAG GTGGTACTCTGTTGGGGCCTGGAAAAATTGTTTCTATTATGATTTGACCCCTGTTGAATAGTTTAAAATTTCAATTCTTC CATGGCCATTTTGCTAACTTACTGTCCTAGCTTAAATTGTTGTTGCTTCTGATTCTATAACAGAATATGTTGCATAATCT CTGCCAGTCTGCAGTGACATAACTGACATTACAAAGTAGACAAATTTTTTAATCAAACTGAAAATGGTCTCCCTTCTGTG CTTCTTATGTTGCAGATTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAAAAACACATAGTTCAACAGC TGGAATACCTCAATACCATACCATCAAATAACCCCACTACTGAGATTCACAGGCAGTCAACTCTTCAGCTGGAGCTTGAA GTACAGCAATGGCACCATTCCTTTTGCAACCTCTTCAAGGCCCACCGGGACTACATCCAGTCTCTCACAGGCTGGCTAAG GCTCAGCCTTTTCCAGTTTAGCCGAAACCCTCTTAGCAAAACCTCAGAGGAGTCAAAGATATACTCTCTCTGCGAAGAAT GGCACCTTGCTGTTGATCGTATTCCGGACAAGGTGGCATCTGAAGGAATTAAAAGCTTGCTGACAGTTATTCATGCCATT GTGGTTCAACAGACAGAGGAGCATAAACAAAAGAAGAGATCAGATTATGCATTTAAAGAGTTTGAGAAGAAGGTGGTACA GCTTCGATCCCTGGAGTGCAAGTATGGTCCTTACTCCGTGCCGGAAACCATAAGAAGAACCAAGGACCCTGTTGCTGAGA AACGTGCAAAGGTGGAAAGTTTGAGGGGAAAGGCAGAGGAAGAAAAGAGCAAATATGAGAAGTCAGTGAGTGTTACAAGG GCAATGACACTGAATAACCTTCAAATGGGTTGCCCGCATGTTTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGA GGTTTTTGAATCTGTATACAACAAAGCTAAAGCCACAGAACAGAACCATGATGTTAAGAGAATAATGCCATAGAACTGAC CTGGATCTGTATAGATGATCACCCTTGCCTATTATCTGTAGATTATATTTACAACTAGGAATACCATGAACCATGATACT TGACATCATGCAACTCCACTGATATGGAGGATGAGTGAAAATTTGTTTTTTTTTTTCCTTTTTAGGGGGTAGGGGGTGTG AAACTCAGTTAAGTTTCGGTGTAGAATCTAATTCAACAAAGGAAGCACAAGCTGCCAACCTTGCAAGGCATGGGCACTGG AAAGCATTAGCCTGAAGTTTCACTTGGTTTCGTTATGTTCCTGATGATATATTTACATTTAGTTAAGAGAATTGGATATT AAGATGAGTGAAATGTTTGTAAGGTTGTGTCTTTCAAGTTTTTAATTTTGGCTCAAAATCTATTGTTCTTATAATTTTGA TTTAGGTGTGGTTAAGATCAAAAGCTCTTCCCAAAAGAACACCGATGTAAACAGCAGTTTTCAAAGTCATATTTATACCG AATCAAAA
CDS sequence (LotjaGi2g1v0379800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGCTGTCATTCCAGCATTGACAGGGAAGAAACGGTGTCGCATTGCAAGGCCAGGAAGCGTTACATGAAGCAGAT GGTGCAAGCAAGGCACGCTTTTGCTGCAGCTCATGTCATGTACATTCGATCTCTCCGTGCAACTGGCTCTGCTCTGTTTC AGTTTGCAAATGCTGAAACTACCCTCCTCCGCCATAACCACCATCTCCCGCCGGAGCCTCAGCCCATTCTCCCACCGCCT CCGCCGAGAGCTCCGACCCCGATGCGACCTCCTCCGCCTCCGATGAGTCCGAGTTCGTATACATGGACATCTGGGACTGC TTCCCCTGCTCTTCCTCCCCCTCCGCCGCCGATGGCTTCCTCCGGTTGGGATTTCTGGGACCCGTTCATGCAGCCTCCGC CTCCGCCTTCTTCGAGGTCGGCGACAGAGGAGGAGTGGGAGGCGACTACCACAACTGGCTCTGAGGTGGTGGCTATGGGG AGAGGTGCGGCAGCGAATATGGTGGCTCCGGCGTCTGTGTCTGGAGGAGGGTTTTCCAAGGAGACCTCGAGTGAGCTTGC AGTGGTGGTGTCAAGGAACAACAAAGATCTTGTTGAGGTTATCAAAGAGCTTGATGATTACTTTCTCAAAGCTGCTGATG CTGGTGCTCAGGTCTCAATGCTCCTACAAGTTCCAACCTCTGGTTTTTCCGATCACAGTAAAGGAGGTAAAGTGTATGGC TATGGATGGAGCCTGAATCCATCTGTGTGGGCATGGGGTTCTAGTCCTAAACTGAATGGATTTGGCAAACTGGCAGAGAC TTCTATTTCTGTTGGGAATTTTGGGGCTAATGGTGCTGGAAGTGGTGGCCACTGCTCCACTGTGGAGAGGCTCTATGCAT GGGAGAAGAAATTGTACCAAGAGGTTAAGAGTGCTAAGACTGCAAAGATGGAGCATGAGAAGAAGGTAGCATTTTTAAGG AAGCTAGAGATGAAAAGAGCTGACTATGTGAAGACAGAGAAGACGAAGAAAGAAGTGGAGAAATTAGAATCACAAATGAT GGTTGCTTCTCAGGCCATCGAAAGCACATCTGCTGAAATTGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTG AGCTTGTGAAAGGATTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAAAAACACATAGTTCAACAGCTG GAATACCTCAATACCATACCATCAAATAACCCCACTACTGAGATTCACAGGCAGTCAACTCTTCAGCTGGAGCTTGAAGT ACAGCAATGGCACCATTCCTTTTGCAACCTCTTCAAGGCCCACCGGGACTACATCCAGTCTCTCACAGGCTGGCTAAGGC TCAGCCTTTTCCAGTTTAGCCGAAACCCTCTTAGCAAAACCTCAGAGGAGTCAAAGATATACTCTCTCTGCGAAGAATGG CACCTTGCTGTTGATCGTATTCCGGACAAGGTGGCATCTGAAGGAATTAAAAGCTTGCTGACAGTTATTCATGCCATTGT GGTTCAACAGACAGAGGAGCATAAACAAAAGAAGAGATCAGATTATGCATTTAAAGAGTTTGAGAAGAAGGTGGTACAGC TTCGATCCCTGGAGTGCAAGTATGGTCCTTACTCCGTGCCGGAAACCATAAGAAGAACCAAGGACCCTGTTGCTGAGAAA CGTGCAAAGGTGGAAAGTTTGAGGGGAAAGGCAGAGGAAGAAAAGAGCAAATATGAGAAGTCAGTGAGTGTTACAAGGGC AATGACACTGAATAACCTTCAAATGGGTTGCCCGCATGTTTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGG TTTTTGAATCTGTATACAACAAAGCTAAAGCCACAGAACAGAACCATGATGTTAAGAGAATAATGCCATAG
Protein sequence (LotjaGi2g1v0379800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCCHSSIDREETVSHCKARKRYMKQMVQARHAFAAAHVMYIRSLRATGSALFQFANAETTLLRHNHHLPPEPQPILPPP PPRAPTPMRPPPPPMSPSSYTWTSGTASPALPPPPPPMASSGWDFWDPFMQPPPPPSSRSATEEEWEATTTTGSEVVAMG RGAAANMVAPASVSGGGFSKETSSELAVVVSRNNKDLVEVIKELDDYFLKAADAGAQVSMLLQVPTSGFSDHSKGGKVYG YGWSLNPSVWAWGSSPKLNGFGKLAETSISVGNFGANGAGSGGHCSTVERLYAWEKKLYQEVKSAKTAKMEHEKKVAFLR KLEMKRADYVKTEKTKKEVEKLESQMMVASQAIESTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQL EYLNTIPSNNPTTEIHRQSTLQLELEVQQWHHSFCNLFKAHRDYIQSLTGWLRLSLFQFSRNPLSKTSEESKIYSLCEEW HLAVDRIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKRSDYAFKEFEKKVVQLRSLECKYGPYSVPETIRRTKDPVAEK RAKVESLRGKAEEEKSKYEKSVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKATEQNHDVKRIMP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 627 | 627 | 2.3E-255 | – | |
| PANTHER | 1 | 627 | 627 | 2.3E-255 | – | |
| Pfam | 1 | 59 | 59 | 3.8E-23 | ||
| MobiDBLite | 66 | 146 | 81 | - | – | |
| MobiDBLite | 71 | 98 | 28 | - | – | |
| Pfam | 197 | 504 | 308 | 1.3E-99 | ||
| Coils | 332 | 359 | 28 | - | – | |
| Coils | 557 | 577 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0379800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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