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LotjaGi2g1v0387200.1

Overview

Field Value
Gene ID LotjaGi2g1v0387200
Transcript ID LotjaGi2g1v0387200.1
Lotus japonicus genome version Gifu v1.2
Description Carboxyl methyltransferase; TAIR: AT1G19640.1 jasmonic acid carboxyl methyltransferase; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|A0A0B2RNI5|A0A0B2RNI5_GLYSO Salicylate O-methyltransferase; Found in the gene: LotjaGi2g1v0387200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:88339407..88343815) extracted from Lotus japonicus Gifu genome v1.2.

ACCAATCAACGCATCCATCTATCTATATATAGAGGAGTGATAGTTGTTAATCTGATCGATCAAAGCATAAACATAGAAAT CAAGTTTGAAGTAGAGAAAAGAGAAACAAGAATGGATGTGGCACAAGTACTGCACATGAATGGAGGCTCTGGAGACACAA GCTATGCAAAAAACTCCTTACCTCAGGTTCAAATAATTTCATTATTAATATATCATGTATATGTAACAGGTAAAATCATC AAAAAGTTTATATAACTAGTAAAACCATTTCATTTTTATTCGGACAATACTACGGTGGACCACGCACATAACTCATGTTT TTACAACTAATTACACTAAATATAAGTTATTTATAGTATGATTTTTATGTACTAAAATTTATTTGCAAAGAATATTTTTT TAACTCGTAAACCAAATTTTTCTTAATTTTTGGTACACAAAGCTGAATTGCTGAAATCTGAATGAATGGTATGCAGCAAA AGGCGATTTCATTGACAAAGGCAATGAGAGAGGAAGCCCTAACCAGCCTCTACCTTAAGAAAGCCCCAAGAATCTTATCA ATTGCAGACTTGGGTTGCTCTTCTGGACCAAACACTTTGATGGTGCTATCTGAACTTGTCAAAACGGTGGAGAATCTTTG CCGGAAAATGAAGCATAAATCTCCTGAATACCAGTTCTTCATGAATGATCTTCCCGTGAATGACTTCAACAACATCTTTA AGTCCCTTGATAGCTACAAAGAGAAGCTAAGTGATGAATTAGGAGCTGAGATTGGTCCATGCTTTTTCACTGGAGTTCCA GGTTCCTTTTATGGCAGGATCTTTCCGACCAAAACTTTGCATTTTGTCCATTCCTCTTACAGCCTTCAATGGCTATCTCG GGTACGTATAAGTAGTCAATGCCACATTTTATAGTAAACAAGCACCAATTAATATGTTTCTAAGCTCAGATTCATACAGT CTTATATAATTTGTATATAATTATGCAACATGGAATGAAGCCAATATGTATCCCATAAGTCAATGCACCACTAGTTTGGC TTGTATGTGTGATAAGATTTTACTATCAAAAAAAAAAAGATTTGTATTTTACATTGGAAGTCGAAACGATACATGTTAAA AGCTAAACTCAGATAGTCAGATACTCAGATTGTAGTATCATTGTTGATAGATACTATGTTCCAACGATAAATAAGTGTTT TTTTTTTTAAAGAACGATATATAAGTGTTATTTTTACCTTACTTGCAAATTGTGAATTATTTTAAATTTTCTCACTCTTA GTCTTAGGATGATAAATTATTATTTCTTTTACAGATCATAATTTTTTGTCTTATTATTATTTTTTTTTTTTTGAAATAGT TGTTGCTGTTGTTAGGAGTGGTACAATTATTACACATTTAAGATTGAAACAATTGTTAATTGGTGATTGATTAGGTTCCT CGAGGTGTAGAGAATAATAAGGGCAACATTTACATGGCTTGCACAAGCCCCTCAAGCGTCCTCAAGGCTTACTACGAACA GTTTCAAAAAGATTTCTCATTATTTCTAAAGTTTCGTGCAGAAGAGCTCGTTGAAGGAGGTTGTATGGTTCTAACGTTTT TGGGAAGAAAAAGTGAAGAGCGATATAGCAAAGAATGTTGTTATATTTGGGGGCTTCTGGCTTTAGCTCTTAATGACATG GTCTCAGAGGTATACATATACATATATTAATTATGAGAAATATTGAGTGGTATGAAAACGAATTGAACACACCATGATAA TTGATAATTGATAACTTTTCTACTCACCTTTTGATAAACCAATTCTTACCATATACAATTTGTCTAATCCTGATTGGTTT TAGGTAAATATATGCTATTCTTGCTTTTCCTAATTAATACTCCCTCCGTTCCAAAACTATTGTAGTTTAAGGGTTATGCA CAAAGTTTAAGAGTTCATTATTAATATTATAATTTGACTAAAACACTCTTATTTAATATGAGTTATATGAAGTAAGAGGT AATACTTAAGAAGTAATATTAAATGGGGCATGAATGGAAGAAAATGAGATAAAGTGCTTTGGATATGTAAAAAAACAATG GTTTTGGAACAAAATAAAAAAAAAAAAAAGCTAAAACTACAACTAGTTTTGGAATTGAAGGAGCAGTAATCCTCATTAAT TAGTTAAAGTTTACTGCTAAATCACCAAATTAAATTAAAGAAAACATAAGTTTGGGAGGTGAATCCGGCACGCACATGGC AACATTGATTTGTCACTAATAAAATAATCTGTTAATCATGATTAAGTATTGACCATTTAATTTGATCTAGAACACAGTAC AGTATCAAAATTATTATAAATACATTATTTTATTTTTTTAAATAATACACATTGAAAAATTTTAAACATTGATTGATTGT ACCAATTTTTTTTTTATCTAAGTGACACATGTGGGTTACTAACTCATAACTCAATGTACTAATAGAATTTCCTATAAATA AATTAAGAAAATATAAAAATTTAATTCACTTATTTTTAATGTGATTGGACGATGAGTTATTTAACCCAAACTTTCTCATG GATGATTTAGTAAAGAAAAAAAAAACATTGATTGAAACATTTAGATAAATTTTCTCATGAGAGAGTTATGAAATGATTTG AAATGATTTACCCAATATGGCATACAGGGGAAAATAAATGAAGAGCAGCTAGACACATTCAACATCCCTCAATACACCCC ATCTCCATCTGAGGTGAAGCTAGAGGTTCTCAAAGAAGGTTCATTCACCATTACTTGCCTGGAGGTGTCTAGAGTACATT GGAATGGTCATGATGATGATGATGACTGGAATAACGCTTTTGATTCCGAATCTCTCAATAACGTTGCAGGATACAATGTT GCAAAGTGCATGAGGGCCGTGGCTGAACCTTTGTTGATAAGTCACTTTGGAGAAGCTGTTGACATTGAAGAGGTTTTCCG CCGGTACCAAGCAATCCTTACTGATCGAATGTCTAAGGAGAGAACTGAGTTCATTAATGTTACCATATCAATGACCAGAA AAGACTAAGGCCGAAGTTGTTTGTATATTGTGGTTTCTCAAAGAAGATAAAGATTCCTCTGTTGCATTGTGTTTGCATTA TGTTTCTTGAATAACATCCTAAACTTTATAGGATTTCTTATGTACCTAAGTTTCATTAAATAATGTTCCACATTATCAAA TCATCTACTAGTTTATATATTAATTTTTTTTTACATAGTGGTGCAGGGGCGGATCCAGACCTTGAATATCAATGAGGCTA AACATAAAAGCAATCATAGACTAAAAGAAAAATATTATAGATAAAACCATGAGAGAAAGTTTCTCATGGAAATAGAGGAG TTTACATTATAGTCCAAGAGTTTACAATGAAAATCGTCTACCATTATTTGAAAATGTGCTAAAATAACATCATTGTCAAT TGTTCCAAGAACATCTCTTTCTATAAAAGTTACAAGACGATCATTTAACCATTGATCACCCATTTTGTTACATAACTGAC TCTTCACAAACTTCATGGCTGAAAACACACGTTCCACACTTGCAGTAGCTACCGGCAAGACTAAAGCCAACTTCAGAAGC TTATAAACTATATCAAATGTGTTGCACCTTTTTGTTTCCACAAGTTTTGCACAAAGATCTGAAAGTCCTTTTAACTTTGC AAATTTTGGATCACTTCGAACATTTCTAACATAATTCTGAAGCTGATGTCGCACTACCACTTCCGGCACATCAACAAAAT CATTTGGATAAAGTTCAACCATCCTCAATAATTTTTTCACATCAAAAGCTTCAAAAGATGATGAGGGATTCAAGCATGAA ACACATTGTAAAAGTTCAGTATTCTCTTCATCAAACCTAGCATTGAGCTCATGCAACTGCAAATCTAAAACACTAAATAA ACAATCATGCTTATAATGATGCAAATTAGAAACACTAGAAGTGATAGCATGTCGTCTAGGTTTCTTCCCTTGCACAAACG GTGCATCCAAATCAGGCACATCAATATCATGCTTATTGCAAATTTTCATAACCTTAGATATAAGTTCTTCCCATCCATCA CTCCTCATTTCTTGCAATTCTTCTTTGGTGGCTTGGACAAGTGATAAAGCATTCAAAAGATCTTGATCACGCTTTTGTAG TGCTTCACTTAAATCATTTGTAAATCCTAAAATCTCAACCATCATGTATAACATGAAAATAAAATCAAAGGATTGAAGCA CTTCTAGCAGAGTGAGACTGAGAACAGAGAAGAAGCGTGCGTATTTGAGAACTGGTGATAGAAAACAAATAATTTTTCTT TTTTTTTAACCATATAAATTTTAAAAAAAAAAAACAATAAAAACCGGTGTGGCCAATGCCACACCTGGCCCCTTAGTGGG TCCGCCCAT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0387200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATGTGGCACAAGTACTGCACATGAATGGAGGCTCTGGAGACACAAGCTATGCAAAAAACTCCTTACCTCAGCAAAA GGCGATTTCATTGACAAAGGCAATGAGAGAGGAAGCCCTAACCAGCCTCTACCTTAAGAAAGCCCCAAGAATCTTATCAA TTGCAGACTTGGGTTGCTCTTCTGGACCAAACACTTTGATGGTGCTATCTGAACTTGTCAAAACGGTGGAGAATCTTTGC CGGAAAATGAAGCATAAATCTCCTGAATACCAGTTCTTCATGAATGATCTTCCCGTGAATGACTTCAACAACATCTTTAA GTCCCTTGATAGCTACAAAGAGAAGCTAAGTGATGAATTAGGAGCTGAGATTGGTCCATGCTTTTTCACTGGAGTTCCAG GTTCCTTTTATGGCAGGATCTTTCCGACCAAAACTTTGCATTTTGTCCATTCCTCTTACAGCCTTCAATGGCTATCTCGG GTTCCTCGAGGTGTAGAGAATAATAAGGGCAACATTTACATGGCTTGCACAAGCCCCTCAAGCGTCCTCAAGGCTTACTA CGAACAGTTTCAAAAAGATTTCTCATTATTTCTAAAGTTTCGTGCAGAAGAGCTCGTTGAAGGAGGTTGTATGGTTCTAA CGTTTTTGGGAAGAAAAAGTGAAGAGCGATATAGCAAAGAATGTTGTTATATTTGGGGGCTTCTGGCTTTAGCTCTTAAT GACATGGTCTCAGAGGGGAAAATAAATGAAGAGCAGCTAGACACATTCAACATCCCTCAATACACCCCATCTCCATCTGA GGTGAAGCTAGAGGTTCTCAAAGAAGGTTCATTCACCATTACTTGCCTGGAGGTGTCTAGAGTACATTGGAATGGTCATG ATGATGATGATGACTGGAATAACGCTTTTGATTCCGAATCTCTCAATAACGTTGCAGGATACAATGTTGCAAAGTGCATG AGGGCCGTGGCTGAACCTTTGTTGATAAGTCACTTTGGAGAAGCTGTTGACATTGAAGAGGTTTTCCGCCGGTACCAAGC AATCCTTACTGATCGAATGTCTAAGGAGAGAACTGAGTTCATTAATGTTACCATATCAATGACCAGAAAAGACTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0387200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDVAQVLHMNGGSGDTSYAKNSLPQQKAISLTKAMREEALTSLYLKKAPRILSIADLGCSSGPNTLMVLSELVKTVENLC RKMKHKSPEYQFFMNDLPVNDFNNIFKSLDSYKEKLSDELGAEIGPCFFTGVPGSFYGRIFPTKTLHFVHSSYSLQWLSR VPRGVENNKGNIYMACTSPSSVLKAYYEQFQKDFSLFLKFRAEELVEGGCMVLTFLGRKSEERYSKECCYIWGLLALALN DMVSEGKINEEQLDTFNIPQYTPSPSEVKLEVLKEGSFTITCLEVSRVHWNGHDDDDDWNNAFDSESLNNVAGYNVAKCM RAVAEPLLISHFGEAVDIEEVFRRYQAILTDRMSKERTEFINVTISMTRKD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF53335
1 370 370 2.82E-131
IPR029063
PANTHER
PTHR31009:SF84
2 370 369 2.1E-179 –
PANTHER
PTHR31009
2 370 369 2.1E-179
IPR005299
Gene3D
G3DSA:1.10.1200.270
6 354 349 9.4E-137
IPR042086
Gene3D
G3DSA:3.40.50.150
21 289 269 9.4E-137 –
Pfam
PF03492
39 369 331 1.6E-119
IPR005299

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0387200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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