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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0388700 |
| Transcript ID | LotjaGi2g1v0388700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Galactose mutarotase-like superfamily protein; TAIR: AT5G66530.1 Galactose mutarotase-like superfamily protein; Swiss-Prot: sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase; TrEMBL-Plants: tr|I3SYV6|I3SYV6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0388700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:88488399..88491697) extracted from Lotus japonicus Gifu genome v1.2.
CGATGATAGAATATCCGAATTTCTGCGGGCACTAGAGAACAAGTAGTCAACAACCATAAAATAAAATGGAGCAATAAAAT AAAAGTATCATCTTCTTCAGTTGGAACTTGGAAACCAAATCCAATGGCGACGGTTTCTATGGCATTCTGTGTCAACACAG TCACATTTTCGAACCATGGCCGACACAACAGGTAACTCAGATTTCATCCATGGTTTTGATTCTTCATCTTCTGATTTGTG GTGTGCAATTCATTGACGAAATTTGCATGTGGTGAAGGTCTCGAGGAATGGCATTTGCTAGTTTGGGCAAAGAAGCTACC ACTCTGGGAGTGAAACTTACAGAAGGCGAAGGGAGTTTGCCAAAACTCGTGCTCACTTCACCAGCTGGTAGGTGCGTAAT TCCAAGCTCTTTTCACTTCACAACCATTGTTTTCAGTTTTCACCTTCAATTCTTGACATTGAATCATATGCACTTGCAGT GAAGCTGAAATCTACCTCTTTGGAGGTTGTATCACCTCTTGGAAAGTTCCCAGTGGCAATGACCTCTTGTTCGTTCGCCC TGATGCTGTTTTCAATAAGAAGAAACCAATAAGGTTGGTTCTTCTCTTAGTTCCTCTAGTAATGTTTTGTTGTTCATCAA TCACTCAAAGCATATGGTTTGAATTCTTCTATTGTGTTGAATTTTTACAAATTTGGGACCCCCCAGACACTGATTCATTT TCTATTGGAGCAGTGGAGGTGTCCCACATTGTTTTCCTCAGTTTGGTCCTGGTCCAATTCAGCAGGTATGCTCCTTTTTC TTGCAGGTTTTTTATTTTGTTTTTAGAATAATCTTTTGTCTGTTAAGTTTCAAAATCATATGTAAAAATCTGATGGAAGT AGAGGTCATCTACCTCTTGGGTAGTTGGGCATGGGATGACTGCTGCCTGCTATCTTTTGCAGCTTAGTATAAATAGTGAT AGCAACTTTGATGTCTCCACTTAGTTTATGAAACTTGCTTCTTTTCAATGAAATTATAAGTGGTGTGTGTGTGATAATAA CTTGATTGTACTGCTCTTGTTTTGAAGCATATGCAAATGCTTTCATTTAAAACATTTGCTTGATTGAGCATTTCGCAGCA TGGGTTTGCACGAAATATGGATTGGACTGTTGCTGATTCTGAAAGTGTGGAAGGAAATCCCGTTGTAACTCTGGAACTGA AGGATGCTCCTTATAGTCGTGATATCTGGGATTTCAGTTTCCATGCTTTATTCAAGGTCAAGGGCTTATTTTCTTCAGGC ACAGTTCACCTTTGCAATACTCTTGACTATTTATACTCACTCTTGTCATGTTCTGCTAGTGCTACCTAATGATGATTCAA TTTCATGCTTCCCATTTTGCAGGTCACTCTAAATGCTAAGAGTCTTTCGACTGAGTTAAAAGTTAAAAACACAGACAATA AGGCATTCTCGTTTAATACTGCCCTGCACACATATTTCCGTGTAAGTGATAATGGTCATAATCATAATTTTGACTAATCA CTATGCCACACAACCAAAATAAGGTGTTTTATTTGTGCTCGAATATTTTCTGTACATTTAGTATTGGGTAACCAAGCATC TAGTTAAATTCCTAAGCAAACAATTGTTCTGTTGAAAATTGTTTGGCTTTTGAACTCAATTTCATTGCTTACACTTGTTA TCTTATGGAAGTAATCATTTTAGCATTATCATGCAGGCTTCTGTGAGTGGCACATCTGTTAAGGGGTTAAAAGGTTGCAA AACTCTGAACAAACATCCAGATCCTAATAATCCAGTGGAGGGTACGGAAGAAAGGTCTGCATCATACTTTATCTCTGGGA ATCCTTATATGGAAATAGGACACTGTAACTACTTGTACAGGGAAAAGAATATTATGACTAGTGAAGTTTTCTTTCCCTTA GTCCAGTGAGATAAAAGCTTGTAGTACCTATAAGTATTTCCAAATATCTTTAACATGCGAAAAATACACAGACATGCATT TTCTCGTGCATAACCTTTTATATGTTATACAATACCCTAGTTGCCTAAAAGTTCACTTTGTTTCCCTCATTTTACCTGAA AATTGATTGCAATACCCTATGATTGCTTCTGTATCATTTCATTCATTTGGTGGCCGATTTCTATGATTGCTTCTATCAAA TTTCATTTCTTTCACAGTAACCTTTCATCTGATGCACAAGTATTTTTATCTCAATGTAATTCTTGTAAAACCAAAATTTC ATAGAACAGGAAGGTAGAATATTGGCATTGAATCTTTTCATTTAGCTGACTAGACCATCTTCATAATGCAGGGATGTGGT CACTTTCCCTGGATTTGTAGATTGCATTTATCTTGACGCTGCCAATGAGTTGCAACTTGACAATGGCTTGGGCGATCTGA TATCAATTAAGAATACAAAGTGTGTAGTTTTAAACTCTCTTTTATTACTTATCATTTTATTTTCCTAGTCGCATGCTTAC ACTCTTTTGCTTCTTACCCATGTAGCTGGTCAGATGCTGTGTTGTGGAATCCACATCTTCAAATGGAAGCATGTTACAAA GATTTTGTTTGCGTTGAAAATGCTAAGGTAATGAACTTACAAACTTGTTAAAAGGGATAGAATGCATACCTTGCAAGGCT GTGCAGTGTTCATGACTAGAATGCTGATGTTAGCTAGTGAATTTAAATAGACAAGCTGTTTTTGAACATATCCATGAGCA TCCTGCAGTTATGCTGTATTATGATTGCTGAAATCGTTTGCAAGACTTCTCTATAGTTTCTTCTGAATTATAATTTCTAC TATTCGTAATTGCTGCAGATTGGAAGTGTCCAGCTAGAGCCAGAGCAAACTTGGACTGCTGTGCAGCATCTCAGCATTGC TTGAACCGTACAAGCCTAGCTTGATCATCATCATTTTTGTCTTATTTGATTTGCCAATAATTTGTATCTATCTATGCCAC TAATGGTTGGCTGCTAGTAAGAGATTGGATAATTTCCCAGAGGTCATAACTCTCAATGCCAAACCTGGTTAAATGTTTGT AAACATCATTGTAATAGAAAAAGTGAAAGTTATAAGATTGTTCTTTTCTTTCAAATTGTATGTTCTCCACACAATTGTAA CTTGTTTTCTTTTTTTCATTCTCTCAATAATTATATCCAACCAGGTTGAATCTTCCAACTTGTGCTCCATCCATTTTTTG TCCTCCTCTGGAAATTGAGTAGTGCTGAAATCAATTCTGAAAACAGAGATCCTAACATCTCGAAGTTGCTAGAGATCCAC TTTTGAAGACCCATATTTG
CDS sequence (LotjaGi2g1v0388700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGGTTTCTATGGCATTCTGTGTCAACACAGTCACATTTTCGAACCATGGCCGACACAACAGGTCTCGAGGAAT GGCATTTGCTAGTTTGGGCAAAGAAGCTACCACTCTGGGAGTGAAACTTACAGAAGGCGAAGGGAGTTTGCCAAAACTCG TGCTCACTTCACCAGCTGGTAGTGAAGCTGAAATCTACCTCTTTGGAGGTTGTATCACCTCTTGGAAAGTTCCCAGTGGC AATGACCTCTTGTTCGTTCGCCCTGATGCTGTTTTCAATAAGAAGAAACCAATAAGTGGAGGTGTCCCACATTGTTTTCC TCAGTTTGGTCCTGGTCCAATTCAGCAGCATGGGTTTGCACGAAATATGGATTGGACTGTTGCTGATTCTGAAAGTGTGG AAGGAAATCCCGTTGTAACTCTGGAACTGAAGGATGCTCCTTATAGTCGTGATATCTGGGATTTCAGTTTCCATGCTTTA TTCAAGGTCACTCTAAATGCTAAGAGTCTTTCGACTGAGTTAAAAGTTAAAAACACAGACAATAAGGCATTCTCGTTTAA TACTGCCCTGCACACATATTTCCGTGCTTCTGTGAGTGGCACATCTGTTAAGGGGTTAAAAGGTTGCAAAACTCTGAACA AACATCCAGATCCTAATAATCCAGTGGAGGGTACGGAAGAAAGGGATGTGGTCACTTTCCCTGGATTTGTAGATTGCATT TATCTTGACGCTGCCAATGAGTTGCAACTTGACAATGGCTTGGGCGATCTGATATCAATTAAGAATACAAACTGGTCAGA TGCTGTGTTGTGGAATCCACATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGCGTTGAAAATGCTAAGATTGGAA GTGTCCAGCTAGAGCCAGAGCAAACTTGGACTGCTGTGCAGCATCTCAGCATTGCTTGA
Protein sequence (LotjaGi2g1v0388700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATVSMAFCVNTVTFSNHGRHNRSRGMAFASLGKEATTLGVKLTEGEGSLPKLVLTSPAGSEAEIYLFGGCITSWKVPSG NDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPIQQHGFARNMDWTVADSESVEGNPVVTLELKDAPYSRDIWDFSFHAL FKVTLNAKSLSTELKVKNTDNKAFSFNTALHTYFRASVSGTSVKGLKGCKTLNKHPDPNNPVEGTEERDVVTFPGFVDCI YLDAANELQLDNGLGDLISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLSIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 311 | 294 | 2.8E-150 | – | |
| PANTHER | 18 | 311 | 294 | 2.8E-150 | – | |
| PIRSF | 38 | 312 | 275 | 1.7E-49 | ||
| Gene3D | 49 | 311 | 263 | 6.2E-76 | ||
| Pfam | 52 | 309 | 258 | 3.4E-45 | ||
| CDD | 52 | 310 | 259 | 4.81959E-106 | ||
| SUPERFAMILY | 54 | 309 | 256 | 1.0E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi2g1v0388700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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