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LotjaGi2g1v0398500.1

Overview

Field Value
Gene ID LotjaGi2g1v0398500
Transcript ID LotjaGi2g1v0398500.1
Lotus japonicus genome version Gifu v1.2
Description Alpha/beta-Hydrolases superfamily protein, putative; TAIR: AT1G47480.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9SX78|CXE2_ARATH Probable carboxylesterase 2; TrEMBL-Plants: tr|G7JMF6|G7JMF6_MEDTR Alpha/beta hydrolase fold protein; Found in the gene: LotjaGi2g1v0398500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:89569187..89570647) extracted from Lotus japonicus Gifu genome v1.2.

CTCTTATAACTTGTCTTTGGTAATAAAGAACCGTTTCCCAAGCTCTACCTCTCGTTTCTCTTTCATTCATAAATCCGATA CATCCAACATTCCAACTCCACTCCCATTCGATCTCACATTCATATCTTCTACTTCTATCATGGATCCAAACCCCAACGAC GTCGTTCGCGAGTTCCCTCACCTCTTCCGACTCTACAAAGATGGCCGCGTCGAACGCTTAATGGGCACAGACACCACCCC TCCCGGCACCGACCATCTAACCGCCGTCCAATCCAAAGACGTCAACATCAACCCCGACACCGGCGTCGCCGCCCGCCTCT ACCTCCCCCCTAACGCCGCCAACAACCTCCCCCTCCTCATCTACATCCACGGCGGCGCCTTCTGCATCTGCACCCCTTAC AACAACGCCTACCACCGCCACCTCAACAACGTCGCCGCGAAGGCAAACGCCGTCGTCGTCTCCGTCCACTACCGCCTCGC CCCGGAGCACCCCCTCCCCATCGCCTACGACGACACCTGGGAAGCCATCCAGTGGGCTGCCGGCCTCCACGACCCGTGGC TCAAGGACCACGCCGATCCCGATCTTGTTTTCTACGCCGGAGACAGCGCCGGCGCTAACATCGCGCACAGCATGGCGATG CGAGGAAATGCTCCCGGAGCGTTGAAACTTCAGGGGATGGTGCTGATTCACCCTTTCTTCGGAAACGATGAGAGGGACAA GCTGGCGGAGTTTCTGTTCCCGACGTACGGAGGGATCGATGACCCGAGGATCCACGCGCCGCGAGACCCGAAGATTTCAG GTCTCGGGTGCGGGAAGGTGCTGGTGATAACGGCGGAGAATGATTTTCTCCGGGAGAGAGGGCGGAGCTATCATGAGGCA TTGAAGAAGAGTGGGTGGAGTGGAACGGTGGAAATGGTGGAGACGCAAGGAGAGGGACACTGTTTTCATCTGTTTGACCC CACCCTTGAAAAATCTGTGGCTCTCGTGAATCAATTTTCCTCTTTCATCAAACAAGTCCAGAAAGATGTGCGTTCATAAA AATACTATAGAGTTGAAGCAAGCCTGTATCAATGGAGTATTATTATGATCATTTTGTTGTTGAATTTGCTATTTGTTTTG ATTTCTTTCTGCTTGTAATATTGTGACTAGGAAATATCGTGTGCATGTGTATGTTTTGGATTTAGAGCTGATTTCATGTA TCTTAGAATATCAACGGAAATCTATTACTTTTCTGGTTAAGTTTAATGCAAATCCAAACACATGCTCTGTTTAGGATTAA TTTGTCAGGTGTTCTTCTTGGCGTGAACTGAATCCATGTTGTTCTAAATTTTCTTGGTCAGTGTATTTATTTTCAGTTTT TTGGTGGGAGTGGGACATAGGTGGGAGGGAAAATGGTTTTTTCTGCAAATTGACTAATAAATTTGCTTACGTCTACATGG CAAATTCGTAACCACCACACT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0398500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCCAAACCCCAACGACGTCGTTCGCGAGTTCCCTCACCTCTTCCGACTCTACAAAGATGGCCGCGTCGAACGCTT AATGGGCACAGACACCACCCCTCCCGGCACCGACCATCTAACCGCCGTCCAATCCAAAGACGTCAACATCAACCCCGACA CCGGCGTCGCCGCCCGCCTCTACCTCCCCCCTAACGCCGCCAACAACCTCCCCCTCCTCATCTACATCCACGGCGGCGCC TTCTGCATCTGCACCCCTTACAACAACGCCTACCACCGCCACCTCAACAACGTCGCCGCGAAGGCAAACGCCGTCGTCGT CTCCGTCCACTACCGCCTCGCCCCGGAGCACCCCCTCCCCATCGCCTACGACGACACCTGGGAAGCCATCCAGTGGGCTG CCGGCCTCCACGACCCGTGGCTCAAGGACCACGCCGATCCCGATCTTGTTTTCTACGCCGGAGACAGCGCCGGCGCTAAC ATCGCGCACAGCATGGCGATGCGAGGAAATGCTCCCGGAGCGTTGAAACTTCAGGGGATGGTGCTGATTCACCCTTTCTT CGGAAACGATGAGAGGGACAAGCTGGCGGAGTTTCTGTTCCCGACGTACGGAGGGATCGATGACCCGAGGATCCACGCGC CGCGAGACCCGAAGATTTCAGGTCTCGGGTGCGGGAAGGTGCTGGTGATAACGGCGGAGAATGATTTTCTCCGGGAGAGA GGGCGGAGCTATCATGAGGCATTGAAGAAGAGTGGGTGGAGTGGAACGGTGGAAATGGTGGAGACGCAAGGAGAGGGACA CTGTTTTCATCTGTTTGACCCCACCCTTGAAAAATCTGTGGCTCTCGTGAATCAATTTTCCTCTTTCATCAAACAAGTCC AGAAAGATGTGCGTTCATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0398500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDPNPNDVVREFPHLFRLYKDGRVERLMGTDTTPPGTDHLTAVQSKDVNINPDTGVAARLYLPPNAANNLPLLIYIHGGA FCICTPYNNAYHRHLNNVAAKANAVVVSVHYRLAPEHPLPIAYDDTWEAIQWAAGLHDPWLKDHADPDLVFYAGDSAGAN IAHSMAMRGNAPGALKLQGMVLIHPFFGNDERDKLAEFLFPTYGGIDDPRIHAPRDPKISGLGCGKVLVITAENDFLRER GRSYHEALKKSGWSGTVEMVETQGEGHCFHLFDPTLEKSVALVNQFSSFIKQVQKDVRS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23024
3 295 293 2.4E-147 –
PANTHER
PTHR23024:SF429
3 295 293 2.4E-147 –
SUPERFAMILY
SSF53474
7 293 287 6.97E-53
IPR029058
Gene3D
G3DSA:3.40.50.1820
14 297 284 1.7E-69
IPR029058
Pfam
PF07859
73 270 198 3.6E-44
IPR013094

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0398500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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