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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0403300 |
| Transcript ID | LotjaGi2g1v0403300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cyclin delta-3, putative; TAIR: AT4G34090.1 cyclin delta-3; Swiss-Prot: sp|P50000|ATPA_ACEWD ATP synthase subunit alpha, sodium ion specific; TrEMBL-Plants: tr|A0A151TID8|A0A151TID8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0403300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:90060071..90062529) extracted from Lotus japonicus Gifu genome v1.2.
GGAAACGGAAGGCAAACGAAAAAGGCGAAAAGAGAATGAAGATCGGCGGCGGGGTATTGTATCGCGGTGGTGCACGCGGC AGCAACGTCGTGCCGCTGCTTCTCAGCCACCGCGGAGCTTCTACTCTTCGCGTCTCTGCTTCTTCTTCCATTTCCGGTAA CGCAACTCTCCTTATCTCAATAAAACGGTGCTGCTCTTTCGTTGATTCACTTCTCACTTTGCAGTTGCAGACCACGTCTC TTTCGTAAAAGACGTAGCCAAAACTCAGCCTCCTCAGCATCTCTCACAACTCTTGACGATTCTGCAAACCAGAGGTATCG CCATTTCACATTATCCTCTTAACTCGCATTTATCTATTTGCAAATTCAAGTATCATGTAACTGTTTTTGCAACCAAATCT TCATCTCAATCTTACAATTAAACTTGTAATGCAACTTTCTATAGAATTTCAAGTTTAGAATAGTCATGAATCTGTATTTT GTGTATGTGCTTGAGCATGTGACTTGGATTATTTTGGTTTATCAAATTATTCTATGCAAATATGCGCCTTGAATTCATTT TTTCTGCTTCCTGATCTTAATTAGGTCATGCATTTGTGTTTAACAGGTGATTCTATTATCTCTCCCGGCGCCAGGCAAGG ATTGATTCCCCTTGCTATACCACTGTCGAAAAACAGCTCAGGTATGGGTTTGTGATTAAGTAGCTTTTAGAAATCTTCAA CTTCAGTATAGTTTTGTATGTAAGTGTTTTTTTTTTCTTTACAGGTAGTGTGACGGCATTGCTGCGGTGGCCAACGGCTC CATCCGAGTGAGGCTCGATGTTCATCCTTTTCCTTTTGGTTGTTTTTGTTTTAATCATGTTATAACTGTAACACAACTGC AGAATGGAAATGCCAGTGGTGGAAGTCAGAAGTTATGGAGTGTGGCTTTTAGCCAAGACTGTAAGTGGAGCATGCTTGGT CTTTTCATTTCATTGCTGGCTTTGTTGTTAATATTGATCAGTGGACACTTTATCGTGTGTCTATTAAGATGGTGTGATGC CAACTGTTTATTTTCTATGTATAGGTGGACCAATTTATTCATAGAATATTGGTTGAAGAAGATGTAAAGAACAGTCAAGA GAGAAATGAAGAACTCTTTTATGCTTCAGCTGATGCTGGGGAGAAGCTTTATAGAAAAGGCGATTTTGCACAGTCTGGAA TTTCTAACCTAGATGGCTATCTTTTGAAAAAGGTATTCATAAATTTCTAAACAGTGTTTTTTATTTTCACAATAAATTAC CGCAAGAATCTAATTTGTTTTCAGGTTGGTATCTTTCCAGATATCCTAGAGCGCAAGGTGAAACGACATTTTGAGGAAGG GGATAATGTAAGGTCCTCTTGCATTTTTTTAGATAGGTCCTCAAACATTAGTCATAAGTCACTTGATACATGTTGGTTAT GTCTGTTTGTGGAAGGTTTCAGCTTTGGTAACGGGGGAATTTTATACTAAGAAGGAACATTTTCCAGGATTTGCACGACC TTTTGTGTTCAATGCTGAGGTTTTGTTGAGGTTGTTGGTAAACGATTTCTGTTACTTCTTGAAGTTGTTCAAAATGGAAA GACTGAACTTATAATTATCATCTTCTAAGAAGCTTTTCTTAAATAAAAAAATTACAGGGTTGGGCGTAATACAGAAGCTA AAGATGCTGCCAGGGGAGCTTTGAAATCACCATGGTGGACTCTGGGCTGCAAATATCATGTATGAAGTCTTTAATCAGTT TGGTTTTCTGGTTTAAGTGCAAGCTTGTGCTAGGTCTCTTTTCCTCCGTTTACCCCTTTTCTAAGTTTGTTCTGTCATAT TCGTTTCAACTAGGATGTGGCTAATATAGCACAATGGGACGATGAGCAAATTGAGTACATTAAAGAGAAAGTGACTGAAG AGGGAAGGCAAGAAGATCTTAAAAAGGGGAAGGCACCTGCACAGGTTCTGTTTAGTGTCAAGTATCAACTATTTATTAAT TTAATTGTTATATGATCATTGCTACAACATCAAACATTCATGGCAAGGGCATATATTGATATTCATATTTTTTCTTTCTT GTTTTCATTTTAAACTCAATTGCAGGTTGTACTAGATGAAGCTGCTTTCTTGCTGGATTTGGCTTCTATAGACGGAAATT GGGATGACTATTTGGACCGGATTGGCAAGTGTTACGAGGAAGCAGGACTATCTGATGTCGCAAAATTTATTCTTTATAGA GATTAATATACTTGGCAGATTTTCTTCCACCTGCAAGCTTCAGTGCCTTCCCGTTTCGGCATTTTATACAATTTATTCTA CAGGCACGAGTATTTTTCCTTGAGTTATGATTTCATTGTAATAAATTAACCTGAACTCCTCACATGTTTCATGCTCTGCA TGTAATAATAATGATATTCTTACACTCTTAACTCACACGAGGCTTATTTTAATGTGCGC
CDS sequence (LotjaGi2g1v0403300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATCGGCGGCGGGGTATTGTATCGCGGTGGTGCACGCGGCAGCAACGTCGTGCCGCTGCTTCTCAGCCACCGCGG AGCTTCTACTCTTCGCGTCTCTGCTTCTTCTTCCATTTCCGACCACGTCTCTTTCGTAAAAGACGTAGCCAAAACTCAGC CTCCTCAGCATCTCTCACAACTCTTGACGATTCTGCAAACCAGAGGTGATTCTATTATCTCTCCCGGCGCCAGGCAAGGA TTGATTCCCCTTGCTATACCACTGTCGAAAAACAGCTCAGGTAGTGTGACGGCATTGCTGCGGTGGCCAACGGCTCCATC CGAAATGGAAATGCCAGTGGTGGAAGTCAGAAGTTATGGAGTGTGGCTTTTAGCCAAGACTGTGGACCAATTTATTCATA GAATATTGGTTGAAGAAGATGTAAAGAACAGTCAAGAGAGAAATGAAGAACTCTTTTATGCTTCAGCTGATGCTGGGGAG AAGCTTTATAGAAAAGGCGATTTTGCACAGTCTGGAATTTCTAACCTAGATGGCTATCTTTTGAAAAAGGTTGGTATCTT TCCAGATATCCTAGAGCGCAAGGTGAAACGACATTTTGAGGAAGGGGATAATGTTTCAGCTTTGGTAACGGGGGAATTTT ATACTAAGAAGGAACATTTTCCAGGATTTGCACGACCTTTTGTGTTCAATGCTGAGGTTTTGTTGAGGGTTGGGCGTAAT ACAGAAGCTAAAGATGCTGCCAGGGGAGCTTTGAAATCACCATGGTGGACTCTGGGCTGCAAATATCATGATGTGGCTAA TATAGCACAATGGGACGATGAGCAAATTGAGTACATTAAAGAGAAAGTGACTGAAGAGGGAAGGCAAGAAGATCTTAAAA AGGGGAAGGCACCTGCACAGGTTGTACTAGATGAAGCTGCTTTCTTGCTGGATTTGGCTTCTATAGACGGAAATTGGGAT GACTATTTGGACCGGATTGGCAAGTGTTACGAGGAAGCAGGACTATCTGATGTCGCAAAATTTATTCTTTATAGAGATTA A
Protein sequence (LotjaGi2g1v0403300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIGGGVLYRGGARGSNVVPLLLSHRGASTLRVSASSSISDHVSFVKDVAKTQPPQHLSQLLTILQTRGDSIISPGARQG LIPLAIPLSKNSSGSVTALLRWPTAPSEMEMPVVEVRSYGVWLLAKTVDQFIHRILVEEDVKNSQERNEELFYASADAGE KLYRKGDFAQSGISNLDGYLLKKVGIFPDILERKVKRHFEEGDNVSALVTGEFYTKKEHFPGFARPFVFNAEVLLRVGRN TEAKDAARGALKSPWWTLGCKYHDVANIAQWDDEQIEYIKEKVTEEGRQEDLKKGKAPAQVVLDEAAFLLDLASIDGNWD DYLDRIGKCYEEAGLSDVAKFILYRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 346 | 316 | 7.2E-177 | – | |
| PANTHER | 31 | 346 | 316 | 7.2E-177 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0403300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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