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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0420000 |
| Transcript ID | LotjaGi2g1v0420000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin-like 120 kDa protein, mitochondrial; TAIR: AT4G17540.1 dynamin; Swiss-Prot: sp|Q9FNA3|NAGLU_ARATH Alpha-N-acetylglucosaminidase; TrEMBL-Plants: tr|A0A0B2SEF6|A0A0B2SEF6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0420000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91817407..91821487) extracted from Lotus japonicus Gifu genome v1.2.
TAGAGAGAAAAAGAAGAGAAGAGAATTTGAGGGAAATGGAAAGTAGCAGTGAGAGTGAGAGGGATGGAATCGGAATTCGA ATCGAGAATCCATTTACTTTGAAGGTAGGTCAAGTGTTCACTGGTTTTGGAATCGGTTGTGGAGTTGGAATCGGCGTTGG ACGCCCTTTAAATTTAGGTACTACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCTATTCTCTGTCATTTCATCAACA AATGGATTTGGGACGCTTCTTCAAACCCAAAACCCCTCAAACTTCTCTTCCTAAACCATGTATTTCTAATTTCTAATTTG TTTTTTTTCTCTCTTCATTTTTCTATGCTTTTATCATATACATTTGTCTCTGATTTTCTATTCATTTTGTGTAGGTGCAA TTCCGATGTTGAATGAGGTAATGAGTGCCACTAGGGGTGCAACCGATGCTTTTTCTGGGGTTTCCAGGCATGTTAATTCT TCTGTAAGTCATAAATCACATTTTTCCTATTCAAACTATGTTTGTTTTTTTTTGTCTGGGATTTAATGAAATAATTGTTT CTCATTTTTGTTGTACAGTTGAAGAAGTTTGGAGCTAAGAATATCGAAGTAGGGATTGGATGTGGTGTTGGTTTCGGTCA TGGTTTTGGAGCTGGTATATACCATATTTTGTTCAGTATATTTCTCAAATCGGTACCAAATAATATAATGTGTCTGCGTT TTGTGAATTTTATGCCGATTGGATTTTAGTTACATATAGCTATCCGCCCATGATATGGTAATCGTGCCATGAGTCCCATT TTTTGTGTCCTTAAATTTGATAATCATCCCATGACTCCCATTTTTACTTGTTAGATTCATGATGTTCTTTATGTTGCTCT ATGTCCCGGTAACTGCAAGCTTGCAAGTAATGAGTTTTCAAAGTATCAGTCTGTAACTCTGTATGTTGTGCCACCATTTG CAATGTTTCTACCTTTAAGGCTCATTTGGTGGTCAATGTGATTAAGACAGATAGGATAAAAGAGTTAGATAAGAGTACAA GAGGATATGACTTATGAGCATGATCATCTCTTATCCTATCCAATGGTTGACATATTCGCTAAGTGGTGCATTTGGGATCT TAACATATTTATATTTCAACTTTCATCATTTTATATGCTCAGAATTCATGCAAGTGCTTGATTCTTTACTCTAGCTGTCC TATATCATATGCCACGCATACATCTTTTTAGTGTTAGTTGTGCAATCCATGAAACTTCCATTAAATTACAGTTTATAAAG AATAAATGGACTATTGCTCACTGCATGCCCCTGTTAAGCTGTGATATAATATGCGAAGCACATGAGAAGGATTTATATTT AAAAACTGTATTGTAAGCCTATACATTCTGATGCATTGTACAGCAAAGTAGAAATAATGTGGAAGCAGAAGACATTGCCA GGAATTGGCATTGTGCCTAAACCTCTGGGTGCTGTGAAATCTAGTGTTGATCTTGCATGAATCTTAGTTATCATTATTAT GCATTCCTGGCCATATTCTATTTGTCACTTGATATGGGTGGATTCATTATTTGAATATTTCAGTTGACTAAGAATTCCCA TGTTTTATGCACATTCTTCAGTTGACAGCTTGACTTTGATTGATTTATGACAGGCCTTGCTGTGAAACCAGGGGTGTTGA ATCAAATTCAATCTTGTGTTGCAGTATGTGAAATTTTCTCTCTTTTAAAAGTATAGTATTTTATTCTCTGCCTTTTTATG CATCTCATTTTTATATTGATTTTGCTAGGTAGCAGTCACAAAGATGATGATGAAGTTTGGACTTACTCCCAGTCTACCCT TTAGTCAGAGTGCAATTCCAGCATCCTTGCAAAGTGCCACAGGCACATTCAACACAAACAAAATTTCTGCAGGAAGCATG GTGCAGTTGGCAACTAGATCAACTGATCACATATCTCAAAGTCCAGCAGGGTCTCAGCCTGTGCAGATTGGTTCTGCTTT TGAAAATACTGCATTAAAAGGCACCTCAGTTGACTCTGCATTAAAAGGCACCTCAGTTGACTCTGCATTTGGCAGCCGGA CTGAGAAGGTCCTTAACAATTTTCTGCAAAGCCCAGTGTTGAAGGGAGAAGGAGGCGGATCTGATGAAGCAGTATGCACT CATTTTCATATATAGCAATTTGATGTTATCATGCCTTTTCTCCTATTCATCAGAGCCTGTTGATTTGTTTTTTAATAATC TTTTGTTAACTTCTGAAAATGCCTTCTAACCCAGTTTCACCTAGACTTTATTCTTCTTACAAGTGTAGATGAAATGAAAG AATTTGCATTTTGTATATAGATAGGCTCTTTTTTTTCCTTAGGGCTACTTGCTAGGGAGTTCAAGACATGGTGTGGAGGT GGGATAGGTAGACTAAAATTGAGGCAAAGCAGCCTCAACGAAATCAAGTAGGACTTGGTATTACTTGAGTTATGGCTTTT GGAAAAAATGCGATTGTTGGGTATTTTTCCAAAAGAATTTGACTCCTCTAAAATGGGAGTGCATGTTATAAGATAAAGGT GTAAGATTATAACTGTGGATCAGAGAATCAATGGTTGAGATTTTAATGACATATGCATGTATTCAATCATAATCTTTGCA TTTTATCCTTTGAAGCATATCTCCACACTTTAGAAGAGTTAAATCCTTGCCAAAAGTTGTTCTGTAGAGGAGTTTGTGAA ATTCCCAAAAAATCATCAGTACATATGGTGGCTATAACAGCAATACTAGTGGTGGCAATGCTGGTGTGGTGGTGGTGCTG ATTGGTAGTGGTACTGTGGAGGAATGAGCGATAAGTGTTGGGGGTAATGGTGTCATATTACATGCTATTCTTCGGTATCA AAGAAAAGGGTTCGACTCATCTAAAGTGAGTGGACTCACTTTACAGGGTAAAGTAAGCATCAAATCATTGATTGAATTAT TTTGTTGACTTTATCGAAGTAGGTAATTACTATTAATGGTTATGATGCTTACTTTACCTTCCATGTTTTAGAACTAAAAA TGAGGACTAAATACTGTTTGTTCCTATATATATATTTTGGTGATTAACTATGGTATTTTAATGCATAATTTTTTGCGTTT AGATTGTTAATATGATCTTCTTAAGAATGTTGTTCTTGGTTATGAAATGGTTTTTATGATAGAATGTTCATTTCTGTATA TCCATTTGTCTCCTCTTTTGTGAATTTTTCTGAGTTAGTGGAATATTGTATGATATTCTGAATCTAATTTCTGAAATACA TTTTGTAGGCTAAACGCTTGCAGTCAGAGAACAAAATACTTCAAATGGTAATGTCCATTGTCTAATTAGTAGTATTTTGT AGCCAAGATGTCAAATCATAAATTCATAATTGATAGCAAGTCTCTTTTTACAATATAAATACTGTTAGTTTTTCAATCTG ATAACTAGGGTACATATGCTTATTGTTGAACTTTCCAATGGTTTAGTTACTTCAATTACTATTTTTACTACTTAATTAAT GAATTATTATTATGGTTTTAGGTTTTGAAACACCAACAAATCATTGAAGAACTTGTGGAGGAAAATGAGAAGCTTCGCCA GATACTAGTGGAGGACCTTAAAGTACCATCCAGCAAGCTTCACGCTAGTCATTCAGGTAGAATGAGAAATACGTTACCAT GTACTGATTGTTTTGAGTGCCGAAGAAAACAAAGAAGAAAGTAGTTAAAGAATAGTAATGAACTCATTAAAGTGCTTGCA TGCTAATGGGTCTCCGGTCACTGGGATACCCCTTTATTTTCTGTGTTTGTTCCTTCCACTGCATCTGCTCATGGGTTACA AATTACTACAGAAACTTTGAGCATAGGTTCACCTGGCCAGGCACATTAAATCGAATTAGCATTAGCTGACAGGCATTTAG GAATTTTCATGATAGGATTTTTTATCCTTTTACTAGAAAAATCAAGAAATAATTCAGTAAAAGTTTATAGCAAAATTTTA AAGATTGATTTTTCTCTCTGCATGTGTCTCTGCCAAGTTTAGTTGAATTGAAAGTTTGTGTTCTGTCTCTTTGAGGCAAG T
CDS sequence (LotjaGi2g1v0420000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGGGACGCTTCTTCAAACCCAAAACCCCTCAAACTTCTCTTCCTAAACCATGTGCAATTCCGATGTTGAATGA GGTAATGAGTGCCACTAGGGGTGCAACCGATGCTTTTTCTGGGGTTTCCAGGCATGTTAATTCTTCTTTGAAGAAGTTTG GAGCTAAGAATATCGAAGTAGGGATTGGATGTGGTGTTGGTTTCGGTCATGGTTTTGGAGCTGGCCTTGCTGTGAAACCA GGGGTGTTGAATCAAATTCAATCTTGTGTTGCAGTAGCAGTCACAAAGATGATGATGAAGTTTGGACTTACTCCCAGTCT ACCCTTTAGTCAGAGTGCAATTCCAGCATCCTTGCAAAGTGCCACAGGCACATTCAACACAAACAAAATTTCTGCAGGAA GCATGGTGCAGTTGGCAACTAGATCAACTGATCACATATCTCAAAGTCCAGCAGGGTCTCAGCCTGTGCAGATTGGTTCT GCTTTTGAAAATACTGCATTAAAAGGCACCTCAGTTGACTCTGCATTAAAAGGCACCTCAGTTGACTCTGCATTTGGCAG CCGGACTGAGAAGGTCCTTAACAATTTTCTGCAAAGCCCAGTGTTGAAGGGAGAAGGAGGCGGATCTGATGAAGCAGCTA AACGCTTGCAGTCAGAGAACAAAATACTTCAAATGGTTTTGAAACACCAACAAATCATTGAAGAACTTGTGGAGGAAAAT GAGAAGCTTCGCCAGATACTAGTGGAGGACCTTAAAGTACCATCCAGCAAGCTTCACGCTAGTCATTCAGGTAGAATGAG AAATACGTTACCATGTACTGATTGTTTTGAGTGCCGAAGAAAACAAAGAAGAAAGTAG
Protein sequence (LotjaGi2g1v0420000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLGRFFKPKTPQTSLPKPCAIPMLNEVMSATRGATDAFSGVSRHVNSSLKKFGAKNIEVGIGCGVGFGHGFGAGLAVKP GVLNQIQSCVAVAVTKMMMKFGLTPSLPFSQSAIPASLQSATGTFNTNKISAGSMVQLATRSTDHISQSPAGSQPVQIGS AFENTALKGTSVDSALKGTSVDSAFGSRTEKVLNNFLQSPVLKGEGGGSDEAAKRLQSENKILQMVLKHQQIIEELVEEN EKLRQILVEDLKVPSSKLHASHSGRMRNTLPCTDCFECRRKQRRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 285 | 266 | 1.7E-113 | – | |
| Coils | 226 | 246 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0420000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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