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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0434800 |
| Transcript ID | LotjaGi2g1v0434800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger protein CONSTANS; TAIR: AT5G41380.1 CCT motif family protein; Swiss-Prot: sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4; TrEMBL-Plants: tr|V7CNK9|V7CNK9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0434800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93110917..93118140) extracted from Lotus japonicus Gifu genome v1.2.
GACGAAAACACGCACTCACCATCCACACTTATATATAGTTTCATTGAAACAAGCAACAACTAGTTTCCTTCAATTATATC TTGAACTCTGTTTCAATGTCTTCTGATCTCTATACTTTTGATGTTCCTTTCCGTACACATTCAAGCCTTGACATGGTCTC CTCTGATGGAATCACAGACCTTCTTTTCTCTGATTCTTACCAGCCTTTCCCTTTTTCCTCTTCTTTCTTTTCTCCTCCTC CTCCTCCAAGTACCCACTTGGAAAATCAGAGTCTCTATCAGCCTAACCCTGTGCAAGATGGCCCCAATATAAATAACAAC TTTGGAAATTACTCTGTTTTAGAAGGGTCCAGAGTGAAAAGTGAAGAATGCCAAATGGGTGTGGATTTTCCTTACAATTC TCACTTTCTTCCACACAGTTTCAGTGGTGCTGATGAAAGTGCATCAAAGTTCATGCAGAGGAGCTACAGCTGTAACTCTT TTGATTGGAAGCTTCACGGTGACGCTTTCATAGACTCTCCAAATTTTGGACGGCATGCCTTGAGCTCCCCTGAAAACAGT TTCTTCACTGGACAAATTAGGAGGGCGTGTAGTGCAGGAGATTTGCAGGTTATAAATGACACCAATTTTGTCAATAAAAT CTTAATTTCTCCCCTTATTAATTCTATTAACTTTAACTCAATTTTGTTTTGCTACATGATCAGAATGTGAAAGCAACACA TACTCCTCAAACGGATAGCCCCTTATTAGAGGAATCAAACTTCAAAGTAGGGCGTTACAGTGCTGAAGAAAGAAGAGAAA AAATCTCTAAATACAGAGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATTAAGGTAAAGAAAGAAAGAAAGAATAGC AAGCACCAACTATTTCTTTAGTACTTATAATTTATAATTTATTAAAGAGACCACCACCTGATATATACAAATGCATGATT AAAAGTAAGAAGATCAAGGAAGAATTTAAAGGTCTGAAATCGCTGGTTTGCTTGTTTTTTGTGTGCTACCTGCAGTACGC ATGCCGAAAGACATTAGCTGACAATCGAACACGCATACGTGGCAGATTCGCACGTAACGACGAAACCAGCGAGGTTCCAA GAGCTACATGTTCAACCACAGCAGAAGAACACGAAGACAACTTCTGGGTAGGTGTATATATGATTTGTCTTTCGCTTCTT AAATTTCATAGCTATGATTTTTAAGAACACAATTTGTTAATCAGTTGAATGCGGTGTTGACAACTTTGAAACTTTTATGT AGGTTGAGTTCGTTGAAAGTTTGAACTTTTATGGAGTTCCTCAGTTTCAGGAGTAGTGCGCCTTTGGAGTTATGTATGAC TGAAGCATCATTTCTCCAAGACCTTTTCATGAAGTTTTGGTTGATAGGGACTTTACAAGGAAGCAGCCTTTTGTAAACCA AGAGAAATAGTACCGAACTTATAAAATTTAACCTTTTTTTAATATACCAGTAAAGACATTGTATTTGGACTGAAAAATGC AACAAAGTTCAAACATATAAGTTGGTAGTTGGAGGCTGCCTCCAGCCAGGTTTTCCTTAGTTGAATTCGATTTCAATTTC AATTTCTCTTTTTGTTTGTTGGTTTTGATCTGTTCAGTGTATATAACCATGAATCTTATTCAATAATCTAGTGCTGTTCT CAGAAAATATGCACAGCAATTATGGTTATTTTTAACTTTATTGTCACATTTGCCGGATTAGGCAGTGGAACTCAAGTTTG TGTTGCTAGTCTTGCTACTTTGTGATAGGAGCGGGAATGCAAGCCCAAAGGATATTCTGATTCATCACACTTCTAGTGGG CCTAAGGTTTGGAGAGTCTATTCTAGAAGGGGCAAGAATGGAATTCCTACTAAGTAATCTTCTAACAGAATAGAGAGAGG GAGAGGAGAGGAGGATTGTAAGAACCATTAGTATAAGGAGGGAAGAGAGAGGTAGAGGGGTCATCTTTGGTTGTTAGCTA TTGAGAGATATGAGTAGGAAGCCTTGAGCTTCCTATAGGAGCTTGCTCTGGTCAGAAACTGGGTGCCATTCCCTTTCTGT ATTTTCCCACAGTTCATCAATAAACAATCGTTCCCTTTCTTTGAATTACTCTGTTTTGCTTACTGTGTGTTTGTGAAATT GGGTTTCCTAACAAAATTGGTCCGACCTACCGGATTATTCCCTCATCGGAACCGGTGAATGCCAACCAAAAAATCCAAGC ATACGGTGACTCACATGGAGGCGAAGATCGACGCGTTGGAGACCGAGCTCGCCGAGATGCGCACGTCATTGGCAGCGGTC ACGTCGGCGGTGAAGGATCTTCCATCGTCTTTCGCAGCGATGATGGAGCGATCGTTGGGTAAATCGGTCCAGCAAGAAGA CGCGAGTGTAACCCACCATCCAGGAGCACAATCGGGTGTGAAAACTCCAGCTCCGAACCAAGAGAAGGTAGGTTTGCAGC GATCTAACCAATTGCACGGTGATGCTCTAACTGAGTTTCGCCAATCGGTGAAGAAGGTTGAACTCCCAATCTTCGATGGA AAGGACCCAGCAGGATGGATCTCGCGGGCCGAGGTCTACTTTCGTGTGCAAGAGACCTCACCGGAGGTGAAGGTGAGCCT GGCTCAACTGAGTATGGAAGGTTCCACCATCCATTTTTACAATGCACTGCGGGAATCTGAGGAAGATCTGACGTGGGAGA AGCTACGTGATGCGCTTTTGGAACGTTATGGTGGACACGGCGACGGCGACGTCTACGAACAGTTGACGGAGCTATGTCAA CGAGGAACGGTAGAGGAATACATCACTGATTTCGAGTACCTTATCGCTCAGATCCCCAAATTGCCAGACAAGCAGTTTCA GGGGTACTTTCTCCATGGGCTGAAAGAGGAGATTCGAGGGAAGGTGAGAAGCTTGACGGCGTTGGGCGGTGTTAATCGCT CCAAGTTGCTGGTAGTGGCTCGCGCAGTGGAGAAGGAGGTGAAGAACGCGAGTGGGTCGGGTTTCCCTCGTGGGAACCGG TTCAGTGGACCGGGTTTTAAACCAGGATTGAGCGGGTCGGGACGGACCGGAGGTGCTGATTGGGTTTGGGTCAAGGGCAA TAAAGATGTTGGGCCAACAAACAAATCCACTGTTTTTAATAACCAAAAGGGGGAGCAGCCAAAAATTCATCCAGAAATTA GAAGGAATGGGCCACGTGAAAGGGGTTTCAATCATCTGACTTATCCCCAACTCATGGAGCGAAAACAAAAAGGCTTATGT TTTAAGTGCGGTGGGCCGTTCCATCCTATGCACCAGTGCCCCGATCGCCAACTGAGGGTATTACTCGTTGAGGAAGACGA CGAGAAAGGAGAGGACGGGAATGTCTTGGCAATGGAGGTGAACGAGCAGGATGACGACACCGAAGGTGAATTGAGCTTTA TGAGTTTGAACAACATCAATTGCGAAGCTCAGGAACAGCCCCAAACCATGCGACTACGGGGAACCATCGTTGGAGTTCCA GTTCTGATTTTGGTGGACAGTGGTGCCACCCACAATTTTATTGATCAACACCTGGTACGACGCATGGGTTGGGTAGTAGA GGACACTCCCAGGATGAGTGTCAAGCTTGGAGATGGCTTCCGAACGCAAGCTCAGGGTCGCTGCAAACACATCGCGTTGG ACATTGGGGAATACCAACTCAATTGCTCACCTCATCTGTTTGATTTGGGAGGTCCAGATGTCGTTTTGGGTATCGAGTGG CTCAAAACCTTGGGCGATACCATTGTGAACTGGCACACTCAACATATGAGTTTCTGGAGCAACCAGAAGTGGATCAAGTT ACAGGGGTTGAGAGCAAGCAAAGATTCCTTGGTGGCGTTACAAAGTATACTGCATCCGTCCCGAGAAGGGAATATGGGAG TATTCTGGGCTTTTGAAAGTCTTAAAACCAACGGGGGAAGTCCACCAAGCATCACCCAAGACCAACAAGTGGCTTTGACT AGGTTGCTGCAGCAATATGACAGTGTTTTCCAAGAGAAACAGGGATTGCCCCCAAGTAGGGGGAAGGAGCATGGAATATC TATAGTTGAAGGTCAGGGACCCGTTAATGTTCGACCGTATCGTTACCCCCATCTCCACAAGAATGAGATAGAGCGACAAG TGAAGGACATGCTGACCACCGGCATCATTCGGCACAGCACAAGTGCTTACTCAAGTCCAGTCATCTTGGTCAAGAAAAAG GATAACTCCTGGCGAATGTGTGTAGATTACCGTGCCCTTAACAAGGTAACCGTCCCTGATAAATTTCCCATACCTGTGAT TGAAGAACTGTTGGATGAGTTACATGGCTCGCGTTACTTCTCAAAGCTTGACTTGAAATCCGGCTACCACCAAGTACGTG TGCGAGCTGAGGATGTGCACAAAACAGCGTTCAGGACGCATGAAGGCCACTACGAATTCTTGGTAATGCCCTTCGGCCTC ATGAATGCCCCCTCTACCTTCCAAAGCTTGATGAATGACGTTTTCAGGCCTATGTTGCGCAAAGGTGTGTTAGTATTTTT TGACGATATACTTGTGTATACCCCTGACTGGGAATCTCATCTGGCACAATTAGAGGAAGTGTTACAGCTCCTGCAGCATC ATAGCTTGACGGCTAATATGAAGAAATGTCAGTTTGCTCAGCTCACGGTGGAATATTTAGGCCATCAGATTTCTGAGCAA GGTGTAGCAGTCGATCCCGCAAAGATTACAAGCGTAGTCAATTGGCCAGTACCAAAAAACGTCAAAGGAGTGCGCGGTTT CCTTGGCCTCACCGGCTACTACCGCAAGTTTATCAGGGACTATGGCAAGATAGCCAAGCCCCTCACAGAATTAACAAAAA AGGATGCATTTCAGTGGGGAATTGAGGCTCAGCGCGCTTTTGAATTACTCAAAGGGAAGCTCACGGAAGCTCCTGTGTTG GCTCTTCCGGATTTTGACAAGGAATTTATGTTGGAATGTGATGCGTCGGGAAGTGGGATTGGAGCCATCTTATTGCAGGA CAAACATCCCATTGCATATTTCAGCAAGGCTTTGGGGACTCGGAACTTGGCTAAATCCGCGTATGAAAAGGAGCTGATGG CCGTAGCATTAGCTATCCAACACTGGCGGCCATACCTGCTGGGCCGCAAATTCTTGGTGTCCACGGATCAGAAAAGCTTG AAAGAATTACTGCACCAGAAAATTGTCACTGGCAACCAACAGAATTGGGCCGCCAAGCTTTTGGGATACAATTTCGACAT TGTTTACAAGCCTGGCAAGTTAAACCGAGGTGCAGATGCTCTGTCCCGAGTAGAAGAAACAGGGGAAATGCACGCTTTGG TGTCACATCCTGTGTGGGAAGAGCAACAATTGGTGGCTGAGGAAATCCAAGCGGATGTCAAACTCTCCAAATTAGTTGCA GACTTGCAGCGCGACCCCAACACACACCCTGGGTTTCATATCACTCGAGGGACCCTTCTCTACCACAACCGTTTGGTCCT GTCCAGTTCTTCTGTTCTAATTCCCAAGATGCTAGAGGAGTTTCATGCCTCTCCTCAAGGAGGCCACTCGGGATTCCTAC GCACCTATCGCCGCCTTGCTGCAAATCTTTATTGGATAGGAATGAAGAATTCCATCCAAGAATTTGTTCGACGCTGTGAT TTATGCCAACGCCACAAATACATGGCTTCTTCTCCTGCCGGGCTCTTACAGCCGCTCCCAATTCCTGAACAAGTGTGGGA AGATTTGTCGCTTGACTTCATCACTGGTTTGCCTAAATCCAAGGGATATGAGGCGATATTCGTGGTCGTGGATCGGCTCT CCAAGTACTCTCATTTTATTCCTTTACGCCACCCTTACACGGCTCGGAGTGTCGCGGATTTATTCACTCGCGAAGTCATT CGTTTACATGGGGTGCCTTCCTCCATTGTGAGCGATCGCGATCCGGTATTCATGAGCCACTTTTGGAGAGAGCTGTTTCG CTTGCAGGGAACTCAATTGAAGATGAGTTCTGCCTATCACCCGGAATCTGATGGGCAAACGGAAGTGGTGAACCGTTGCC TTGAAACTTATCTACGCTGTTTCTCAGCGGACCAACCCAAGTCGTGGGCAATGTGGTTGCATTGGGCGGAATATTGGTTC AACACCACCTATCACTCTGCCACGCATCAGACCCCCTTTGAGATTGTGTATGGCCGCAAGCCTCCTTCCCTTACTCGCTG GAGCCTAGGGGAGACGCGTGTGGACGCTGTACAGCGTGATTTGGTAGAAAGGGACGAGGCGCTCCGACAGCTCAAAACAC ACTTGGTTCAAGCCCAGGAACGTATGCGAGCCCAGGCTAATGCTAAGCGGGTAGACAAGTCATTCACGGTGGGCGAGTGG GTTTTTGTCAAGCTTCGAGCTCATCGCCAGAACTCAGTAGTTGCTCGCGTCCACGCCAAACTAGCTGCTAAATACTATGG CCCATACCCGATTGTGGCTCGTGTTGGGGCCGTGGCCTATCGCTTGCAACTACCAGCGGGCTCACGCGTACACCCTGTTT TCCACATCTCGTTGCTTAAAAAAGCAATTGGGAATTACTCTGTGGAAACTGAGCTTCCAGAACAGTTGGATGGCGAGGAC CTCCCTTTGCTACAGCCTACCTCAGTGCTTGCTTCGCGCACCATCACCCGACAGGGTGAGCTAGTTCCCCAGTTATTGAT CCAATGGCAAGGAAAATCGACTGATGAAGCTACATGGGAAGACGCTCTTACCATCAACAGTCAATTCCCAGCTTTCAACC TTGAGGACAAGGTTGCAGTTGCAGCAGCCGGTATTGATAGGAGCGGGAATGCAAGCCCAAAGGATATTCTGATTCATCAC ACTTCTAGTGGGCCTAAGGTTTGGAGAGTCTATTCTAGAAGGGGCAAGAATGGAATTCCTACTAAGTAATCTTCTAACAG AATAGAGAGAGGGAGAGGAGAGGAGGATTGTAAGAACCATTAGTATAAGGAGGGAAGAGAGAGGTAGAGGGGTCATCTTT GGTTGTTAGCTATTGAGAGATATGAGTAGGAAGCCTTGAGCTTCCTATAGGAGCTTGCTCTGGTCAGAAACTGGGTGCCA TTCCCTTTCTGTATTTTCCCACAGTTCATCAATAAACAATCGTTCCCTTTCTTTGAATTACTCTGTTTTGCTTACTGTGT GTTTGTGAAATTGGGTTTCCTAAC
CDS sequence (LotjaGi2g1v0434800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCTGATCTCTATACTTTTGATGTTCCTTTCCGTACACATTCAAGCCTTGACATGGTCTCCTCTGATGGAATCAC AGACCTTCTTTTCTCTGATTCTTACCAGCCTTTCCCTTTTTCCTCTTCTTTCTTTTCTCCTCCTCCTCCTCCAAGTACCC ACTTGGAAAATCAGAGTCTCTATCAGCCTAACCCTGTGCAAGATGGCCCCAATATAAATAACAACTTTGGAAATTACTCT GTTTTAGAAGGGTCCAGAGTGAAAAGTGAAGAATGCCAAATGGGTGTGGATTTTCCTTACAATTCTCACTTTCTTCCACA CAGTTTCAGTGGTGCTGATGAAAGTGCATCAAAGTTCATGCAGAGGAGCTACAGCTGTAACTCTTTTGATTGGAAGCTTC ACGGTGACGCTTTCATAGACTCTCCAAATTTTGGACGGCATGCCTTGAGCTCCCCTGAAAACAGTTTCTTCACTGGACAA ATTAGGAGGGCGTGTAGTGCAGGAGATTTGCAGAATGTGAAAGCAACACATACTCCTCAAACGGATAGCCCCTTATTAGA GGAATCAAACTTCAAAGTAGGGCGTTACAGTGCTGAAGAAAGAAGAGAAAAAATCTCTAAATACAGAGCCAAGAGAAGCC AGAGGAAGTTCAACAAGACTATTAAGTACGCATGCCGAAAGACATTAGCTGACAATCGAACACGCATACGTGGCAGATTC GCACGTAACGACGAAACCAGCGAGGTTCCAAGAGCTACATGTTCAACCACAGCAGAAGAACACGAAGACAACTTCTGGGT TGAGTTCGTTGAAAGTTTGAACTTTTATGGAGTTCCTCAGTTTCAGGAGTAG
Protein sequence (LotjaGi2g1v0434800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSDLYTFDVPFRTHSSLDMVSSDGITDLLFSDSYQPFPFSSSFFSPPPPPSTHLENQSLYQPNPVQDGPNINNNFGNYS VLEGSRVKSEECQMGVDFPYNSHFLPHSFSGADESASKFMQRSYSCNSFDWKLHGDAFIDSPNFGRHALSSPENSFFTGQ IRRACSAGDLQNVKATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRF ARNDETSEVPRATCSTTAEEHEDNFWVEFVESLNFYGVPQFQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 274 | 274 | 9.2E-101 | – | |
| PANTHER | 1 | 274 | 274 | 9.2E-101 | – | |
| ProSiteProfiles | 201 | 243 | 43 | 14.813 | ||
| Pfam | 201 | 243 | 43 | 3.6E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0434800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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