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LotjaGi2g1v0437300.1

Overview

Field	Value
Gene ID	LotjaGi2g1v0437300
Transcript ID	LotjaGi2g1v0437300.1
Lotus japonicus genome version	Gifu v1.2
Description	Membrane-associated kinase regulator, putative; TAIR: AT1G64080.1 membrane-associated kinase regulator; Swiss-Prot: sp\|Q9SH58\|MAKR2_ARATH Probable membrane-associated kinase regulator 2; TrEMBL-Plants: tr\|V7CMP9\|V7CMP9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0437300
Working Lj name	n.a.

Genomic sequence (LjG1.1_chr2:93393412..93395524) extracted from Lotus japonicus Gifu genome v1.2.

GTGATGTCTGAGCTTGAATCAGAAACAATAAAAGCGAGCTTTCTCTTTCTGCTATGAGAATTGAGATAGATATTAAATCA AAATTGCCCTCTCTCACTCTATTTATTTTACTGACTCCTATCACATGACTTCCCTGCAACTCTGCACAATACTGACAAAA TTTTATTAAATAAAGCAAACAAGAGAAAACCACAGTCTCTGTTTTCCTCTGCCACTCACACCCACCATTCCTCTCTATTT TGCAATTGCATCCTCCATTAACACTTTCCTTCTCTTCCCTTTTTCTCCCAAAAATATCAACTCCTTTTCTCACTCACTCT CCACATCTAAAAAGGCAAATCAAACCACACTCACACTCACTTTGGTTATACTGGCTCTCCCAACTATGGAAGCTTTTAGT TTGCTCAAATACTGGCGAGGTGGTGGTGGTGCTGGGCCTGGATTACTTCTCACACCATCCTCTTCCTCTGACACCACCAC CACTATTTCCACCACCGCCGCCGCCGTAGCTCAAACTGATAACACAACCGACAGCAGCAGCACCAGCGACGATGACGACG ACGGCGGCGATGACGGTCCTTTCTTCGACTTAGAGTTCACTGTTCCCGATGAATCAGAAGACGGTCAACAAAACCCAAAT CACACCCACCCAGAAGAAGAAGAAGAATGTGATGAAGGTGAGGGAGAGGGAGAGTTCAAGTTCACGCTGTCACCTTCAAG CAACGACCGTGCCGCTTCGGTTTCTCCTTCTGACGATTTGTTCTTCAAGGGGAAGATAGTAGAGGTGGACCCTTCTTCTT CCACCGAATCCACCGCTAACAAACCTCAGTTCACCGCTTCATTGTTGAAATCCGCCACCAAACTTCGCGTCTTCATGTCG GGTCTCAAGAAACCAAAACCTGATTCCTCTGCTCCGAACCCGGAACCAACCAAGAAGAACCACCACCACCAGCATCAGCA GAGGGTGAAATTCAAAGTGGAGGAAGTTCCAATCGTGTCTCTGTTCACCAGAGACCACAGCTCCAGAGTCAACAAACCGC AACCACAGAACGAAACAGAGGAGTCATCACCACCTTCGGTTTCAGAGGAGAAGCGTTTCTCCAAGGAGGTAGTGATGCAC AAGTATTTGAAAATGGTGAAGCCTCTGTACGTTCGGGTTTCTCGTAGGTACGGGGAGAAACTAGCGGCGGAGGGAGGGGA ACGTATTGCGGAAACTGTTGTCGGCAAGGGTCAAAAACAGGGGAATCTCCCAGCGAGGCTTCGGGTTGTGTGCAAGCATT TGGGGAAGAGCCGTTCGGCCTCTTCGGCGGTGGCAGCTTCTCCGCCGGCGGCGGCGGCTGAATCTTCGAAGCGGCGTGAT GACTCGCTGTTGCAGCAACAAGATGCGATTCAAGGGGCCATTTTACACTGCAAGAGATCTTTCAATGCCTCCAGAGGTAA TTAATACACTTGTAAATTGTTCATGGTTGATGCTACTAGTTTTTGAAGAGTTTTGGTTTGTTCATGTTTTGAAACAGGTT GTGAATCTTCTCAGTTGCCACGTTCTGTGAGTGACCCGTTGCATGATGTATCCAGTGAATTATCAAGGAAGTCTACTACT GAAGGCAAAGACAAGAGATTGCCTTTGAAGAATGAAGAAAAATGAGTTGAGGGGTAGTTTGTGTGAAAAGGGTAAATGTT AGTATTTGAAAACTAGCAGGATCTGTAGTAGTAGTACTAGAAGGGTAAAAAATGTAAGAGAAGGTAGAGTTTGAGATGAA AGAAGGAAGCTACTTGCGACCTTGCTCATTAGGATGATCAATGCCTCTTTTTCATAGTACTGTTAACTGTAAAAGCTCTT CTCTCCGATAAAGAGAAAGAAAAAGCAGATATTTTCTGTGTAATTTTGTGTATATCTATGTAGGAGTAGCTAGTAAGCTG CATTCTAATCCAGTAATCCATAATACTGAGTAGAAAGGAATATTGCTATGGAAGGAAGCATTACATTCATTAATTTTGTA CTATTGTTGTAAGTAATCTATGTTTTAAAATCTGGCTTACCAATCTAATGTTCCTAATTGGGTTTTATTTGGTAAGCTGG TTCTCAAAGAATTGGTTTGTATTTGAAAGAAGG

Download Genomic Sequence

CDS sequence (LotjaGi2g1v0437300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGCTTTTAGTTTGCTCAAATACTGGCGAGGTGGTGGTGGTGCTGGGCCTGGATTACTTCTCACACCATCCTCTTC CTCTGACACCACCACCACTATTTCCACCACCGCCGCCGCCGTAGCTCAAACTGATAACACAACCGACAGCAGCAGCACCA GCGACGATGACGACGACGGCGGCGATGACGGTCCTTTCTTCGACTTAGAGTTCACTGTTCCCGATGAATCAGAAGACGGT CAACAAAACCCAAATCACACCCACCCAGAAGAAGAAGAAGAATGTGATGAAGGTGAGGGAGAGGGAGAGTTCAAGTTCAC GCTGTCACCTTCAAGCAACGACCGTGCCGCTTCGGTTTCTCCTTCTGACGATTTGTTCTTCAAGGGGAAGATAGTAGAGG TGGACCCTTCTTCTTCCACCGAATCCACCGCTAACAAACCTCAGTTCACCGCTTCATTGTTGAAATCCGCCACCAAACTT CGCGTCTTCATGTCGGGTCTCAAGAAACCAAAACCTGATTCCTCTGCTCCGAACCCGGAACCAACCAAGAAGAACCACCA CCACCAGCATCAGCAGAGGGTGAAATTCAAAGTGGAGGAAGTTCCAATCGTGTCTCTGTTCACCAGAGACCACAGCTCCA GAGTCAACAAACCGCAACCACAGAACGAAACAGAGGAGTCATCACCACCTTCGGTTTCAGAGGAGAAGCGTTTCTCCAAG GAGGTAGTGATGCACAAGTATTTGAAAATGGTGAAGCCTCTGTACGTTCGGGTTTCTCGTAGGTACGGGGAGAAACTAGC GGCGGAGGGAGGGGAACGTATTGCGGAAACTGTTGTCGGCAAGGGTCAAAAACAGGGGAATCTCCCAGCGAGGCTTCGGG TTGTGTGCAAGCATTTGGGGAAGAGCCGTTCGGCCTCTTCGGCGGTGGCAGCTTCTCCGCCGGCGGCGGCGGCTGAATCT TCGAAGCGGCGTGATGACTCGCTGTTGCAGCAACAAGATGCGATTCAAGGGGCCATTTTACACTGCAAGAGATCTTTCAA TGCCTCCAGAGGTTGTGAATCTTCTCAGTTGCCACGTTCTGTGAGTGACCCGTTGCATGATGTATCCAGTGAATTATCAA GGAAGTCTACTACTGAAGGCAAAGACAAGAGATTGCCTTTGAAGAATGAAGAAAAATGA

Download CDS Sequence

Protein sequence (LotjaGi2g1v0437300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEAFSLLKYWRGGGGAGPGLLLTPSSSSDTTTTISTTAAAVAQTDNTTDSSSTSDDDDDGGDDGPFFDLEFTVPDESEDG QQNPNHTHPEEEEECDEGEGEGEFKFTLSPSSNDRAASVSPSDDLFFKGKIVEVDPSSSTESTANKPQFTASLLKSATKL RVFMSGLKKPKPDSSAPNPEPTKKNHHHQHQQRVKFKVEEVPIVSLFTRDHSSRVNKPQPQNETEESSPPSVSEEKRFSK EVVMHKYLKMVKPLYVRVSRRYGEKLAAEGGERIAETVVGKGQKQGNLPARLRVVCKHLGKSRSASSAVAASPPAAAAES SKRRDDSLLQQQDAIQGAILHCKRSFNASRGCESSQLPRSVSDPLHDVSSELSRKSTTEGKDKRLPLKNEEK

Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR33929 View details on PTHR33929 Search for proteins/transripts with this domain View external data on PTHR33929	1	371	371	1.5E-133	IPR039619 Show description in modal box View details on IPR039619 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR33929:SF1 View details on PTHR33929:SF1 Search for proteins/transripts with this domain View external data on PTHR33929:SF1	1	371	371	1.5E-133	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	11	122	112	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	21	50	30	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	51	65	15	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	162	195	34	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	207	237	31	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	209	228	20	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	303	330	28	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	350	392	43	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	350	367	18	-	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	368	392	25	-	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005886 View details of GO:0005886 AmiGO InterPro QuickGO	Cellular component	Plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.	Subterm of View details of GO:0016020 View details of GO:0044464 Part of View details of GO:0071944

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0437300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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