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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0438400 |
| Transcript ID | LotjaGi2g1v0438400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aldose 1-epimerase, putative; TAIR: AT4G23730.1 Galactose mutarotase-like superfamily protein; Swiss-Prot: sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase; TrEMBL-Plants: tr|G7KAP1|G7KAP1_MEDTR Glucose-6-phosphate 1-epimerase-like protein; Found in the gene: LotjaGi2g1v0438400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93536494..93539956) extracted from Lotus japonicus Gifu genome v1.2.
CTTAATTAAAGACCAGATAAGATAACTGAACTATAAAAGCAAAAGCGTTTTGGAACAGGCGGTGCCAAAAATTGATTACT CTTTCTTTCTATCTTCTCTTGTTGTATTACTACTAATCACTTGAATTGGATTGGATTTGGTTCCACTTCCACTTGCACTT GCACTCCATCATCACCCATTATAACCCAAACACCAATTACAATCCATCTTTCTGGATCTGCTAGTTGGTGGAAGTTGGAC TATCGGTTTCAAACTTCACAAGAAAGGTCTCTTGGGTTGGGAAGGAACCTTGTGATTTTTTCACCTGCTTCCTTCCGTGA CTGCTCAACCTCTTCTCTTCTGTCACGTCCAATTTGGGGTTTTATTGATAAGTCAGTTTCAAACTCCATTTTCTTCAATT TGAATTGATATCTTCCTCCTCAGTGTGGGGTTATGGAGACCGTTCATTCAAGTGCAGAAAGCGATAACAGACCAACGGTT GAAGTCACCAAGGACAAGAATGGAATTGACCAATTCGTTCTTCGCAACCTTCGTGGTTCTTCTGCAACGGTAAGCTTGCA CGGAGGCCAGGTTCTTTCATGGAAAACAGAACGCGGTGAGGAGTTACTGTTCAGTAGTAGCAAGGTGAATGTAATGAGCT TCAATTTTGTGACTATTATTTCTGAATTATTATCAATTAGGCAATCTTCAATTGAATTTGTGAATCTTTGTTGACTTTTC AATTAGGCAATATTTAGTCCTCCGAAACCCGTGCGAGGAGGAATTCCAATCTGTTTTCCACAGGTAATTTTAGGTCAATG CTATTGAATAATTGCCGAAACATGTGAATTCATAGTTAACAAATGAGGTTTGTGCAATTGATTTCCAGTTTGGAGCCCGT GGATCGCTAGAGCAGCATGGATTTGCCAGGAACAAGCTATGGGTTATTGATCAAAATCCTCCACCGCTTCCCGGTGATTC CAATGGAAAAGCCTGCATTGACTTGCTGCTCAAACCATCCGAAGACGATATGAAGTTATGGCCACACAGGTGAATTCTTG ATTTAATTAGCATTGAATCCTCTATAGTTGACTTGCATCAGAACCAGCATTTTACTTTTCTTTTGAATTTGGGGCTAAGA ATAACTAAGATAAATTGGGAGGATACATGCTGTTATTGTCACAATCTCTGTATGTGAATTGTATGAAAAGATAAATGAAT TGTCATCAAGAATGTACAAGCCCTAAAAAATCATGTAAACAGTTTGATTCCTCACTTGCCTGGGCTACAAGCAAAAGCAA ACCATAGGCCAAAGAAAGTTAATCATCTCTTATCATCTCATTAGTATAGTCATATCTCATGCATCTTGATATTGCTGAAT TGTTTTATCCAGCTTCGAGTTTCGGCTAAGGGTCTCTTTGGCAGCAGATGGCCATCTAATCATGATATCCCGCATCAGGA ATGTCAATAGCAAGCCTTTTAGTTTTTCCTTTGCGTACCACACGTATTTCTCCATCTCTGATATTAGGTCTGTGTACTAT TTAAGTCCCTATCCATCACTTGCCTAATCCCAAGTTGCAAAATTTGAATAAGCTAATTAAGTTAACATGTGCTGGTTATT GACAGTGAAGTGAGAGTAGAAGGATTGGAGACTCTTGACTATCTGGACAACCTGTGCCAGAAGGAACGCTTCACAGAACA AGGAGATGCTTTGACATTTGAATCAGAGGTAAGGCAATTGATGATGTCTTCATTCAAGTCATATGCATACTTTTATCAAC TTCAGTTACTCTGCCAAGGTGGTGTGTTTGGTTTTCTGTTTACATCAATGTAAATAAACATCCACATCTACTTCGAGACA AAAAGTGGATCGAAAGTTCATTCACGTTGCAGTTAATTAGTATCTAAAGGCACACTAAGGTTTTATCAGAAAGCTAAAAT CTTATCTTTCCCATATTAATTTAAGGTGGATCGGGTCTATCTTGATTCCTGCGACGTGGTAGCTGTCCTAGATCATGAAA GGAAGCGAACATTTATGATAAGAAAGGAAGGACTACCAGATGTTGGTAAGGATCTCAAAATCAAGTACTATCTATTATTG GTAAATTCTGTCTTTAAGTTGCACAACCAACATAACTAAAACTAACCATACCATTCAAAATAATTTTGGTGTTTCATATA GTTGTTTGGAATCCGTGGGAGAAAAAATCCAAGTCCGTGGTGGATTTAGGGGATGAAGAGTACAAGCACATGCTATGTGT TGATGGTGCAGCAGTTGGAAAACCAATCACCTTAAAGCCAGGAGAAGAATGGAGAGGCCGCTTGGAGCTTTCTGTTGTGC CTTCTACTTGATTTCAAAGTGACTTTTATACTAACAGAATAAACCACCATGCAAGCATTGTTTTTGAGTAAGTGGTAGTT GTTTCTGCAAATCTTGTCACCTAAATAAAAGTCTTTAATGAGCATGTAAATATATGAGGGAAGTCCTCATATCTAAGATG GTTGACTGAATTTGAATATTCTTCACATGGTAGGGTATATAACTTAGAGGAATGTTAGCAATGCTCTTTTAACATAAACT TCAACGCACCCATTGGTTTATATTTTTAAAAAAATGTATGGGTCTTTTTACTTTTTAGAAAAAAACAAACTAATTTCATG AAGAAGTGTGTGAGAGAGCGTGTTTAAAAGACTCATGGATATGTTTAAGAGATTGAAATACTCTTTCTCATATCTTGTCC CACCAATAAAATTCTGACTTGTTCAGGAAACTGTGGTTATTCCTTCATTTTATTATGACATGTCAATTAAAAATACATGT GTATCCCAGTTATAACTTTTATAAACTTAAATTTCAGATTTTTAATTGACAAGAAGCAATTCTATTGGTATGACATGCTA GGGGATATTAACTGCAAAGGATCTTAATCCATGTGATCAAAAGCTTTTCCCTTTTACAATATAAACGTGTAAGTAATGTA CATGAAAATAGTGCAGTTAACCTTAAAAGGTTTATGATTATGAATATATTATTTTTTCTCCGTTTGGTATACTTTGCACC CAAAAATAGTCAAAATTTAATTTTTAGTCATAAACTGTATTAGTTGAAAGTTAAGCAAATATTAGTTGATTCAATTAAAA GTGTTTGGTAGGTAACATGAGATATTGGTTTGACCCAACACCAAAAAACATATTGGTTTGAACTTTGAACGTTAAATTTA AGAGTTTAATTTATCATACGTACACTGACAGTGTAAGAAATACAGTCATCCATTAGAATGCATGTCATAATTAAATTAAA TTTTAAAATAGAGAGACGTGATTAGAGATGCATGTACAAAACTATTTATATTGTCAGTGCATATAAATTAAATCCTAAAT TTAAATGATACTTGTTAATATAAATTTTATTCTAATTTTACAAATAATTTTTTAGCTAATTTTAAATTTAATTTTTTTTA GTTTTATAAATTTTTATTTAAAC
CDS sequence (LotjaGi2g1v0438400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACCGTTCATTCAAGTGCAGAAAGCGATAACAGACCAACGGTTGAAGTCACCAAGGACAAGAATGGAATTGACCA ATTCGTTCTTCGCAACCTTCGTGGTTCTTCTGCAACGGTAAGCTTGCACGGAGGCCAGGTTCTTTCATGGAAAACAGAAC GCGGTGAGGAGTTACTGTTCAGTAGTAGCAAGGCAATATTTAGTCCTCCGAAACCCGTGCGAGGAGGAATTCCAATCTGT TTTCCACAGTTTGGAGCCCGTGGATCGCTAGAGCAGCATGGATTTGCCAGGAACAAGCTATGGGTTATTGATCAAAATCC TCCACCGCTTCCCGGTGATTCCAATGGAAAAGCCTGCATTGACTTGCTGCTCAAACCATCCGAAGACGATATGAAGTTAT GGCCACACAGCTTCGAGTTTCGGCTAAGGGTCTCTTTGGCAGCAGATGGCCATCTAATCATGATATCCCGCATCAGGAAT GTCAATAGCAAGCCTTTTAGTTTTTCCTTTGCGTACCACACGTATTTCTCCATCTCTGATATTAGTGAAGTGAGAGTAGA AGGATTGGAGACTCTTGACTATCTGGACAACCTGTGCCAGAAGGAACGCTTCACAGAACAAGGAGATGCTTTGACATTTG AATCAGAGGTGGATCGGGTCTATCTTGATTCCTGCGACGTGGTAGCTGTCCTAGATCATGAAAGGAAGCGAACATTTATG ATAAGAAAGGAAGGACTACCAGATGTTGTTGTTTGGAATCCGTGGGAGAAAAAATCCAAGTCCGTGGTGGATTTAGGGGA TGAAGAGTACAAGCACATGCTATGTGTTGATGGTGCAGCAGTTGGAAAACCAATCACCTTAAAGCCAGGAGAAGAATGGA GAGGCCGCTTGGAGCTTTCTGTTGTGCCTTCTACTTGA
Protein sequence (LotjaGi2g1v0438400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METVHSSAESDNRPTVEVTKDKNGIDQFVLRNLRGSSATVSLHGGQVLSWKTERGEELLFSSSKAIFSPPKPVRGGIPIC FPQFGARGSLEQHGFARNKLWVIDQNPPPLPGDSNGKACIDLLLKPSEDDMKLWPHSFEFRLRVSLAADGHLIMISRIRN VNSKPFSFSFAYHTYFSISDISEVRVEGLETLDYLDNLCQKERFTEQGDALTFESEVDRVYLDSCDVVAVLDHERKRTFM IRKEGLPDVVVWNPWEKKSKSVVDLGDEEYKHMLCVDGAAVGKPITLKPGEEWRGRLELSVVPST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 303 | 302 | 7.8E-96 | ||
| PIRSF | 2 | 304 | 303 | 5.3E-69 | ||
| PANTHER | 10 | 304 | 295 | 3.0E-180 | – | |
| PANTHER | 10 | 304 | 295 | 3.0E-180 | – | |
| SUPERFAMILY | 21 | 299 | 279 | 1.63E-67 | ||
| Pfam | 27 | 299 | 273 | 1.1E-66 | ||
| CDD | 29 | 300 | 272 | 1.23291E-118 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi2g1v0438400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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