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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0440300 |
| Transcript ID | LotjaGi2g1v0440300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myosin heavy chain-like protein; TAIR: AT1G64320.1 myosin heavy chain-like protein; Swiss-Prot: sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2; TrEMBL-Plants: tr|A0A072TUS7|A0A072TUS7_MEDTR Myosin heavy chain-like protein; Found in the gene: LotjaGi2g1v0440300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93670675..93675619) extracted from Lotus japonicus Gifu genome v1.2.
CTATTTCTTAATCCAATCGGGTTGGTGCAAATCGAGTTCCATTTACCAGGTACTGTAACGGTTTTCATTTTGTACGTGTA TCAGAAAAAAAATGGATTTGGATCATTATTACATTATACGCTTCATTTATATTCATGGAAGAGAATGTGTTTTATCATTC GCTGAGTGCATTAATTTATCAGGAAATGAAAGTGTTCGTAATTATATTTTGAATCCAGATGGTCAATGTAAGAAAAAGTC AGGGGTAACATAAAATGCTGAACAGAGATTACTATTGGAGAATGTTTGAGATTAATTTTTTAATGAAATAATTGAGTTTT TATCATGATTATGTTTCCATTCCATTTCACCATTTCTGAAAGCTGATTAGAATATGGTGATTGGTGAATTTAAAAATTTA ACGATAGATTTAATGAATTATATTAAAACTTGGAGAATACCTGTAATGTTAGGGATTTAATCTGTGCACCTAGGGTTAAC TTTTAGGTTTTACATGCTATATTTATTGTGGATTCATTGCCATGTTATGTATATAGCATTTGTACTTGATTGATCAGCTA GATTCGATTGTGATGCTCTGTCGATGTTTATTTCTCCCTTATCAAGTTTGTTGAGCCTTTCCATGTTTTCTCTAAATTTT AATGCTCTTATTTCTTATGGAATATTTGAATTCCATTAATCAACTCTGAGAAAAGCTTTGTTGAGTAATTTCAATGCTTG AAAACTGAATATATGACAGGAAGAAAAACTGGTCCAATCATTAATGGCAATGTTGGTTGAACAAATCTGAAAAACACAAG ATACGTTGTTTGTTGAAAGCAAATATGGTGAAAGGAACATGGCATGGATGGTCCTATTTTGCCATCGCAATTGCAAAGCA GCAAAGGGGGAAATTGATATCACTAGACCCAGACGTAAACCTCAATCACATCCTAGTGCCCACAACTTGCAGAAACAAAA TTTTATCACATTGATTTAAACATGCATCAACGTCGAGTTTAAAAGAAATTCAAACATATATTAAATCATTTCATCTAGTT GTTTACAATTGGACAACTATTTTTCTATCATGTAGTAAATCTTGTCACAGGAGAATATTTGGAAGGTCAACCCAAAAAAT TAAAGATAATTTTTCAGTGGTGTCAACTTAAAAATCATAACAACTATTTTTTTTAAAACTAAAAATCATAACAACTATTC AATAATTGCAACCTTATTACCAAAAAGTTAAATAAATATAAACCAACTACTATTCACATGACTGAAAATGGTTTTGATTC TAAGTTATTCTGTGTGTATTCATATAGTTTTTTTATTAAAATTGAGGTCTCATATTGTTACATAATGATTTATAACGGGT TTAAATCTAGAGCACTTTAGTTTCTTTTTACTACATCGGAAAATCACTTAAAATTAGCAAAAATGAAAATCTGTTTTATA TGTAAGAAATTGCATGTTAGCTTTAAAATATTTCTACAATAATATATAGTCAAACATTATTACATGATTAAACGAACGTC AACCTTATAACCAAAAAGTTAAAAAAGCTTGGCCTATTATCTATTTTTAAAATAACATGACAACATACTGAAAACAATGA TCAAAGGTGACATTGACACCATCAACTTTCTAGTGTTATTCTAACAACAAAAATACTTTCTAGTGATTGAGATATTTTCT TATTGTAAAATACAAGTTTTTCCTTAACTTTGCCAATCATACTGAGAAACAACAATGAATTAGTGACAACTCTAACTGCT CTATATTCAGCATTTTACAACCAAACATGTATATCAAATAGTGTGGGGTTGTTCTAACTTAAGCATAGATCTCAAACTCA AGTGAATATAATTGTGTTAATTAAATACATTGGTGAAATTCCTTTTTTTAAATATTGCAGTTATTGATTGCTGTGGCTAA TTCCCTGTCAAACATGATCTATTTGTTTTTGCTTTTTAATGAATAGCAAGTTAGCTACTACTTCACATGCCCTTGTTTCC ACAGTTATTATCAAGTGATGCAGCTTCTATTTGCATTGAATCCGTCGATTAAGTGCACGTGACGTGAGACATGTAGTTGG CACTGCAAGCTAATCAACTACTGAGTACAAGTGCATTGCAAATTGCAATATGCTAACATGATACATGAACATTTCAAATT CCCCTTTTAATTTTTCATGTCTGTCTACAATTCTCAATTTCAGGATTCCTAGTCACTTGCAGAGAAAATGAAGAGTTCAT AACCAGACACTTACATTTGAACTTAAATCTTTTCGAATGTCCCATAGTGAAAGGATGATCAAGCGCCACTTTAGGGAACA ACTATCCAAGTCCTTTGGGTGTCAAATTGATCCTGAAAAAGCTGAAGAACTCAGAAGAACCAAAACAGGTGCAGATAATT CTTTCTTGTAAACATGAATACTTGTGTTACACATGAATTTGGAATACCTATAACTAGAAGAAGAGACTGGTTGCTTTAAA CAGAAAGAAGAAAAAAACAAGAATCAACTATGTGAAGTCTACCTTTGAAAGTAACTTCTTTTTGATTTCAGAATTGATTC TGATGAAAGATAGACATGCTATAAGACTAATAACAACAAAAATATTGGCTTTTCCTGCTCATTGCATTTTGCAGTGTCAT CTTTTAACTACTGAACATTTATTATTCATAAATTTCCCATTCTCACACAGATATTGACAACAACCTCACAAGAATCCTGA AGCTTGTTAAGAGCGAAGACCAAAGCAAAAAAGACGGGAACTCCAGGAAAGACACAGAACTTGTGGGACTAATTGAGGAC TTCTACAATCAATACCAATCATTGTATGGTCGTCTCACTGGAGAGTATGTGAAAGCAGTTCCTCACAGACTAGAGAGGGT GCAATCTGTGTCTTCCTCTGGCTCAGAGTCTGACTACTTCTCCTCAGAGGAATTTGACACTAACACAGAGCTCATTGACT CAAAACAAAGACGGCGTTCTAGTTTTGCCGGTGCCCTTGAAGCTCTTAGGACACAAGCATTAACTGAGGAACATTTAACT ACTCAAAAGGAGGTGGAGAGCTTGAACCAGCAGAAAAGGACTCTAGAACTTCAAGTTAAAAGCCAAGCAAATGAAGTTAA ACAGCTAGGGACAAAGAATGCTGAGCTCTATGCGCGTGTGGTGGAGCTTGAGTTGATGTTGAAAGAGAGTAAAAGGATGT TGAAAGAGAGCAGAGGAGCAGTGTCTGTGTTCCAGGCAAAGCTCAAAAAAAGCGAGGAACAAGCAATTTCCAAGGTTGCA GATTTGATGGCCCGGATAAACAAGCTCGAACAAGAAGCTAAGTCTCTTCGGACCCAGAAAGCAAGAATGGAAGAAAAGAT AAAACGCAATAGAAATGAAAGTTTAAGCCAAAAGAAGGACCTCACTGACCAACTTAATGCCATGCAACAAAATTTGGATT CGGTATGTGATAAGAACAAAGAGTTGGAAGCTCAACTGGAAAGAGAGAGTGAAAAAGTTTCACAACAGTTGGTTCGGATA GAAAATTTGGAGGAGAATTTAGCTGAGACGAGTTCAGTTGAAGAGTGCCTGCTAAAAGAGAAAGAGTGTTTTCTTGCAAG GATAAAAGACTTGGAACTGGAAGTGGAATCTCGACACAGCAAACAACACGATTTGGAACAGAAGTTAAGAGATACAAGGT GTGAGATTAATCGGGTAGCATATGAAGGAAAGGCAGTGCAGGATAGAAACCAAGAACTAGAAAGGGCAATGGCACAGAGA GAGGAAGAGATATTTGCTCTTTTGAGGGAACAAGAGAGTGGAGCTTCTACAAAGGCTGATATTGATGATCTGAGACTGGA GTTTGAAACTTTGCAGGAACAGAAAAGCAAGTTGAAGTTACAAAATGAACAAAGCCAAAAGGAATGTTCAGAAAGACTAG CCAAGATGGAGAATTTGAATGTCAAGTTAGAAACTCAGGTGGCAGATCAAGAGGAAACAATAAAGAAGCTAACAGAAACC ATAGACCAAATACATGCAGAAAACAATCAAGCCAGAATTTGGTCGAAGAAGTTCAGGTCATATCAGCAATTCACAGAGAG GAAAATGGACGAACTGACAGAAGAGTTCCGGAGGAAAATGGAAGACAATATCCGCATATTGCACCAGAGGATCCATGTAG CAGAACAGCTGAACAATGAAAACAAAGACAGTCACAAAATGACAAGGCAAAGGTATGAGCAAGAGAACAAAATACTTGGA GAGAAAGTTGCTAGTTATGAAGATGAAATTAGAACACTTAAAGCTTCACCAGAAGAGGTTAGTCTAAATGGGTTAGGATT GGAAGCTCTAAATGGGCTAGATTTTGCTGCTGGGAAGCTTGAAGAATACAGAGAGTATGTCCTGAGTCTTGTCTCTAAGA TGATGAGTGAGGTTCAGTTTGCAAAGGGTTGGGTGAAGAAAAGAAATGGGGAGATGAAACAACTGAAAGACAAGGTAGAT CATCTTACAGTACTGCTGGGGGACAAAGAAGAGCAGGAAGTGTTGTTAAGAGAGAAGGTGTGGGAATTGGAAGCCAATGT GAGCAAGGAAGGAGGGCAGAAACTGAACCTGATGAGAGAAATAACACAGCTTGAAAGGAAAGTGGGAAAATTGGAAAAGA ATCTGAAGGAGAAGGATGAGGAGTTGGTTGTGCTTGGGGAGAAGAAGAGGGAAGCAATAAGGCAGCTTTGTTTTCTAATC GAGTTTCATCGCGATCGCTGTGTCTATCTAAAGGATTTGATGTTCAAGACCAGGCTCCATAACAGGAAATGAGTTTAACA GACGTCTTTGCCTGTAGACCTACCAGGAAAATAGAAAAACACTTCTTTTCCCCTTTGCCATTGTTATCTTTTTTCCCTCA ATGTAAAGTCTCACTGCATTTGCTAGCCAAAAAGACTGATTTTGTTAAAGGGGCACCACTTTTAA
CDS sequence (LotjaGi2g1v0440300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCCATAGTGAAAGGATGATCAAGCGCCACTTTAGGGAACAACTATCCAAGTCCTTTGGGTGTCAAATTGATCCTGA AAAAGCTGAAGAACTCAGAAGAACCAAAACAGATATTGACAACAACCTCACAAGAATCCTGAAGCTTGTTAAGAGCGAAG ACCAAAGCAAAAAAGACGGGAACTCCAGGAAAGACACAGAACTTGTGGGACTAATTGAGGACTTCTACAATCAATACCAA TCATTGTATGGTCGTCTCACTGGAGAGTATGTGAAAGCAGTTCCTCACAGACTAGAGAGGGTGCAATCTGTGTCTTCCTC TGGCTCAGAGTCTGACTACTTCTCCTCAGAGGAATTTGACACTAACACAGAGCTCATTGACTCAAAACAAAGACGGCGTT CTAGTTTTGCCGGTGCCCTTGAAGCTCTTAGGACACAAGCATTAACTGAGGAACATTTAACTACTCAAAAGGAGGTGGAG AGCTTGAACCAGCAGAAAAGGACTCTAGAACTTCAAGTTAAAAGCCAAGCAAATGAAGTTAAACAGCTAGGGACAAAGAA TGCTGAGCTCTATGCGCGTGTGGTGGAGCTTGAGTTGATGTTGAAAGAGAGTAAAAGGATGTTGAAAGAGAGCAGAGGAG CAGTGTCTGTGTTCCAGGCAAAGCTCAAAAAAAGCGAGGAACAAGCAATTTCCAAGGTTGCAGATTTGATGGCCCGGATA AACAAGCTCGAACAAGAAGCTAAGTCTCTTCGGACCCAGAAAGCAAGAATGGAAGAAAAGATAAAACGCAATAGAAATGA AAGTTTAAGCCAAAAGAAGGACCTCACTGACCAACTTAATGCCATGCAACAAAATTTGGATTCGGTATGTGATAAGAACA AAGAGTTGGAAGCTCAACTGGAAAGAGAGAGTGAAAAAGTTTCACAACAGTTGGTTCGGATAGAAAATTTGGAGGAGAAT TTAGCTGAGACGAGTTCAGTTGAAGAGTGCCTGCTAAAAGAGAAAGAGTGTTTTCTTGCAAGGATAAAAGACTTGGAACT GGAAGTGGAATCTCGACACAGCAAACAACACGATTTGGAACAGAAGTTAAGAGATACAAGGTGTGAGATTAATCGGGTAG CATATGAAGGAAAGGCAGTGCAGGATAGAAACCAAGAACTAGAAAGGGCAATGGCACAGAGAGAGGAAGAGATATTTGCT CTTTTGAGGGAACAAGAGAGTGGAGCTTCTACAAAGGCTGATATTGATGATCTGAGACTGGAGTTTGAAACTTTGCAGGA ACAGAAAAGCAAGTTGAAGTTACAAAATGAACAAAGCCAAAAGGAATGTTCAGAAAGACTAGCCAAGATGGAGAATTTGA ATGTCAAGTTAGAAACTCAGGTGGCAGATCAAGAGGAAACAATAAAGAAGCTAACAGAAACCATAGACCAAATACATGCA GAAAACAATCAAGCCAGAATTTGGTCGAAGAAGTTCAGGTCATATCAGCAATTCACAGAGAGGAAAATGGACGAACTGAC AGAAGAGTTCCGGAGGAAAATGGAAGACAATATCCGCATATTGCACCAGAGGATCCATGTAGCAGAACAGCTGAACAATG AAAACAAAGACAGTCACAAAATGACAAGGCAAAGGTATGAGCAAGAGAACAAAATACTTGGAGAGAAAGTTGCTAGTTAT GAAGATGAAATTAGAACACTTAAAGCTTCACCAGAAGAGGTTAGTCTAAATGGGTTAGGATTGGAAGCTCTAAATGGGCT AGATTTTGCTGCTGGGAAGCTTGAAGAATACAGAGAGTATGTCCTGAGTCTTGTCTCTAAGATGATGAGTGAGGTTCAGT TTGCAAAGGGTTGGGTGAAGAAAAGAAATGGGGAGATGAAACAACTGAAAGACAAGGTAGATCATCTTACAGTACTGCTG GGGGACAAAGAAGAGCAGGAAGTGTTGTTAAGAGAGAAGGTGTGGGAATTGGAAGCCAATGTGAGCAAGGAAGGAGGGCA GAAACTGAACCTGATGAGAGAAATAACACAGCTTGAAAGGAAAGTGGGAAAATTGGAAAAGAATCTGAAGGAGAAGGATG AGGAGTTGGTTGTGCTTGGGGAGAAGAAGAGGGAAGCAATAAGGCAGCTTTGTTTTCTAATCGAGTTTCATCGCGATCGC TGTGTCTATCTAAAGGATTTGATGTTCAAGACCAGGCTCCATAACAGGAAATGA
Protein sequence (LotjaGi2g1v0440300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSHSERMIKRHFREQLSKSFGCQIDPEKAEELRRTKTDIDNNLTRILKLVKSEDQSKKDGNSRKDTELVGLIEDFYNQYQ SLYGRLTGEYVKAVPHRLERVQSVSSSGSESDYFSSEEFDTNTELIDSKQRRRSSFAGALEALRTQALTEEHLTTQKEVE SLNQQKRTLELQVKSQANEVKQLGTKNAELYARVVELELMLKESKRMLKESRGAVSVFQAKLKKSEEQAISKVADLMARI NKLEQEAKSLRTQKARMEEKIKRNRNESLSQKKDLTDQLNAMQQNLDSVCDKNKELEAQLERESEKVSQQLVRIENLEEN LAETSSVEECLLKEKECFLARIKDLELEVESRHSKQHDLEQKLRDTRCEINRVAYEGKAVQDRNQELERAMAQREEEIFA LLREQESGASTKADIDDLRLEFETLQEQKSKLKLQNEQSQKECSERLAKMENLNVKLETQVADQEETIKKLTETIDQIHA ENNQARIWSKKFRSYQQFTERKMDELTEEFRRKMEDNIRILHQRIHVAEQLNNENKDSHKMTRQRYEQENKILGEKVASY EDEIRTLKASPEEVSLNGLGLEALNGLDFAAGKLEEYREYVLSLVSKMMSEVQFAKGWVKKRNGEMKQLKDKVDHLTVLL GDKEEQEVLLREKVWELEANVSKEGGQKLNLMREITQLERKVGKLEKNLKEKDEELVVLGEKKREAIRQLCFLIEFHRDR CVYLKDLMFKTRLHNRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 16 | 93 | 78 | 18.125 | ||
| Pfam | 21 | 85 | 65 | 1.3E-10 | ||
| PANTHER | 30 | 129 | 100 | 1.4E-176 | – | |
| PANTHER | 30 | 129 | 100 | 1.4E-176 | – | |
| PANTHER | 142 | 736 | 595 | 1.4E-176 | – | |
| PANTHER | 142 | 736 | 595 | 1.4E-176 | – | |
| Coils | 145 | 179 | 35 | - | – | |
| Coils | 226 | 334 | 109 | - | – | |
| Coils | 377 | 404 | 28 | - | – | |
| Coils | 415 | 481 | 67 | - | – | |
| Coils | 496 | 516 | 21 | - | – | |
| Coils | 543 | 570 | 28 | - | – | |
| Coils | 626 | 646 | 21 | - | – | |
| Coils | 668 | 709 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. |
Expression pattern of LotjaGi2g1v0440300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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