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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0441600 |
| Transcript ID | LotjaGi2g1v0441600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF674 family protein; TAIR: AT5G01130.1 hypothetical protein (DUF674); Swiss-Prot: sp|Q696W0|SPEG_DANRE Striated muscle preferentially expressed protein kinase; TrEMBL-Plants: tr|K7L1J8|K7L1J8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0441600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93778003..93779464) extracted from Lotus japonicus Gifu genome v1.2.
GTTCAGTTTTACTGAAAAGTTCCAATGTCAACTGTGATGGATTTGTTCAGCGTGGTGCCACTTTTATCATCACTGATGAT CTCATAATCAGGCCAAACTCAATGGAAACAAGCTTTGGTGTGATCCAGAATTTTGAAATTAAAAACACAAGTTCAGTCAA GCAAATTACTGTCAATGTCACTAAGGAAAAGGTTTTGCTCTGCAGTTGATCTATCTTGGTTGATGATTTGTTCCTTCATA TGCATATTTTGCTCTGTAATTGTGCTATTTCAATTATTTTTTTGATAGTTTTTTCTTCTATGTAGTTGCTGGATCTGCTT AAGTGTTCTCTCTTCTCCAAGTCAGCTCTGTCAGATTTGTTCTTAGAAACGAAACCATTCCTCCAACCAGAAAGGCTTTC AGCTTGTTGTTTTGTAAACAATAGTAATAATAATAATACTAATGGTTTCCAAATTAAGGTGAAACTATTTATGAGGAAAT CAGATGGCAAGATAGTGTTTGCTCAAGGAGAAGAAGATTTTGCAGACTTTGTTTTTAGTTTTCTCACCTTCCCTTTGGGC GGCGTTGTGCGAAAGTTTAGGGGTTATTCTTCTCTGGGAAGCATTGATGGATTGTACAAGAGCATGAATGATTTAAATGG ATGCAAATATTTTACGTCAGATGATATAAAGAATCGGCTTGTTGATCCTTTCATTGCCTCTCAGTTCAAATTAAGCAAGC AGATATTACCAATCAAGGAACCGCCACTTTTACAATATTATTATCATAATGTTTATGATGATTTAATAACTGCATCCAGT GAAAATCAAGCTTTAAATAGAGATCGTTGTCATTTAGTTGATCCCAAATCATCTACGGGAAGTAATGGAGGTGGCTATGT GAAGGGACCAGCTGTGTTCATGGCTACAGATGACTTGGTTGTATTACCAATGACTCCAAGCTCAGCTTTGTCTTTACTTG ATAGTTTGCAAACTCCTCCTACTGAGCTTAAGGAGAAAATTGTCACCATTGGCTTCAATGAGGTGAGGCCAGTATTAGCT TTGTTGTTACATCATATTCATATGGTTGTGTGTTTGAAAGTTATGTCTCACTATATCTAGACTAAATTTAATTACTTGGA TTCATGTACTGTGGCAGTTAATCATTTTACAATGTTGCGTTGGTGGTGCAGGGTTGCAGCATATTGAAAGCAGCTTTGAC CTCAAAATCAGCTCTAACAAATGGTCTCCGCCATTTGATAACTCAAGTTAAAGAGGAGAAATGTGCGTACACATTGCTAG GTGTGTGTTAAAGATTGTGGCTTCAAGTTAAACTTGTAATGGGCCACAATACTAGATCCTACTATTGTGTTCTGGTTGTT GTTCTTTTTGTACCGCCATTCAAGCTCTTTAAACTTTGGTTATTACTAGTTCTGAATTTTGAATGGAAAGACATGTCTTC TAATTTATCTGCAAGAGTTTTC
CDS sequence (LotjaGi2g1v0441600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAATCAGATGGCAAGATAGTGTTTGCTCAAGGAGAAGAAGATTTTGCAGACTTTGTTTTTAGTTTTCTCACCTT CCCTTTGGGCGGCGTTGTGCGAAAGTTTAGGGGTTATTCTTCTCTGGGAAGCATTGATGGATTGTACAAGAGCATGAATG ATTTAAATGGATGCAAATATTTTACGTCAGATGATATAAAGAATCGGCTTGTTGATCCTTTCATTGCCTCTCAGTTCAAA TTAAGCAAGCAGATATTACCAATCAAGGAACCGCCACTTTTACAATATTATTATCATAATGTTTATGATGATTTAATAAC TGCATCCAGTGAAAATCAAGCTTTAAATAGAGATCGTTGTCATTTAGTTGATCCCAAATCATCTACGGGAAGTAATGGAG GTGGCTATGTGAAGGGACCAGCTGTGTTCATGGCTACAGATGACTTGGTTGTATTACCAATGACTCCAAGCTCAGCTTTG TCTTTACTTGATAGTTTGCAAACTCCTCCTACTGAGCTTAAGGAGAAAATTGTCACCATTGGCTTCAATGAGGGTTGCAG CATATTGAAAGCAGCTTTGACCTCAAAATCAGCTCTAACAAATGGTCTCCGCCATTTGATAACTCAAGTTAAAGAGGAGA AATGTGCGTACACATTGCTAGGTGTGTGTTAA
Protein sequence (LotjaGi2g1v0441600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKSDGKIVFAQGEEDFADFVFSFLTFPLGGVVRKFRGYSSLGSIDGLYKSMNDLNGCKYFTSDDIKNRLVDPFIASQFK LSKQILPIKEPPLLQYYYHNVYDDLITASSENQALNRDRCHLVDPKSSTGSNGGGYVKGPAVFMATDDLVVLPMTPSSAL SLLDSLQTPPTELKEKIVTIGFNEGCSILKAALTSKSALTNGLRHLITQVKEEKCAYTLLGVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 213 | 213 | 3.6E-63 | – | |
| Pfam | 1 | 181 | 181 | 6.7E-42 | ||
| PANTHER | 1 | 213 | 213 | 3.6E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0441600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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