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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0451100 |
| Transcript ID | LotjaGi2g1v0451100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WEB family protein, chloroplastic; TAIR: AT5G16730.1 weak chloroplast movement under blue light protein (DUF827); Swiss-Prot: sp|Q9LFE4|Y5673_ARATH WEB family protein At5g16730, chloroplastic; TrEMBL-Plants: tr|A0A0S3T679|A0A0S3T679_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0451100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94436438..94440910) extracted from Lotus japonicus Gifu genome v1.2.
TGCACATGGTACCAGTTGGTATAAAAAATTTAAAGAGAGTTGGAGGGTTTCATGAAAAGAAGGGTAAGGTTGGAAGAGAG AGACATGTCTTTTGCCCCTGATAAAGTTACACATGCCTTTAGCTTTCACAGATTGATGATTTATGCAAATCCAGGGTTAC TTTCGTCCATTCACTATACTCCACCTGAAGACATACTCACACGAACTAACCACACTCTGCTAGATAGCAATGGGAGAGAG AAAGTGAGAGTGAGTGAGAGAGATACTGAAGAAAATGGTTAACACTAACAGCAGTTAGTGAGAGAAACACAAACACAAAG TGGGTTTGTTTGTTGGAGACAAGAAAACCAACCAAATTTATGTTTTGTAACCTCTCTCCAATTTTTGAGAAAAAGAAAAC ATTTTGATCTTATTCTGATCTAAAATTTGTTCTGTTTCATGTTTTTTTGATAATGCTGGAACTTGAGCATTTCCAATTCT GCAACTGAGTAAACCCTTTTCACTCTCTGGTGTTTTCTCCACCACCATGGCTTCGAAGTCCAGGTTAGTTACTCAAAGCT TGGTGCTTTTTTTGTTTTGCTTTAAGATCTGATTTGGATTTCTTCAACTTCCTCTCTGCACTGCTTCACACTTTCCTTTT TCATATTGTGAGATTTCTTGATTAATGGGGTTTGATCTGCTGGTTTAAAAAAGCATTTTCTGCCTAAAGTTCGGTGCTTT TTCTTGTTTTCTACACGGTATGCGTAGAATTTTAAGATGGGGTTCTAGGTTCACTTCATTTTCATGTGTTCATCTTTTTC CATTCTTCTTATTTCATGCTTTTACAGTTGTGGTTGCATCACTATATGTGATTCTGGCCCTAATTCTCAATTCTCGGTGA TAATTACTATGTCTCTTCTTTTCTTTTGGTTTTGCCTGGTGAGTGTTTATTGTTTGATGAGTTTGGCTTGTCAAATGCCA ATGCTTCTAGATATTACTGAATTTGGTGTGATGAGTTGGTTTCATTAGGCTTAGATCCATTTATCCGATTGCATACTAAT ATGGAATTTTTGCTAGTTTATATAGTATCTTGTCTTTTTTCTGTTTCATTTAATGCTTTTGTTTGATATGGAATTGGCAT TGTGAATCTTATAGATCCGGTTTATCTGAAACTCCCAACAAAGCACCACCAGCTACTCCTAACAAAGCACGGCCGTCAAC TCCCAACAAAGGATCACCTGCAACTCCAAGAGTTAGTAAACTCGGCAAAGGAGTGTCCAAACCGGATTCCGAGTCGCCAT CGCCTTTGCAGAATTCTCGCATTTCTGCAGAGAAATCGATATCTCCTTTGCAGAGTACGCGTCTTTCTGCAGAGAAATTG CCATCACCTTTGCAGAATTCGCGTCTTCCTGCAGAGAAATCGCCACGATCTTTAAATTCAAAGCCCATTGCTGAGCGGAA ATCACCAAGGCCCACCTCCACCACACCTGATGTAAGTTATAGTATATACACTTTGTTTCCTCATTAACTTTAAGATTCAG TCATGTTTAGCCCTGTTACTAAATACTCGAATAGTTCGACTTTTTTCGATATCTGTTTTTAAATATCCAGTCCAGTATGT GGTAGTGAACTGCTGAAGATGTTTCCTTCATTATGCTTGATAGTTGACGATACAACAATAAAAAATATCTATTGTCATGC TTTTCTTTGGTTATCTGTATTCTGATATGTGTTTATTATGTTCTTTGATTGTTCAGAAGCAACCCCTAAAAGCTGCGAAG GGTTCAGAATTGCAAATCCAGTTAAATCTTGCTCAAGAAGATCTAAATAAAGCAAAGGAACAGCTGATTCAGGCTGAGAA AGAAAAGGCAAAAGCAATTGATGAGCTAAAAGAAGCACAGAGAGTGGCTGAGGAAGCAAATGAGAAACTCAGGGAGGCAA TGGTGGCTCAAAAGCGGGCTGAGGAGGACTCTGAGATCGAGAAGTTCCGAGCTGTTGAATTGGAACAGGCTGGACTTGAA GCTGTTCAGAAGAAGGATGAAGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCTTTGGATGTGGCTTCTCT TCTCTCCACCGCTCAGGAGCTTCAGCGCGTTAAGCAAGAACTTGTCATGACTTGTGATGCAAAGAACCAGGCTTTGAGTC ATGCTGAAGATGCAACTAAAATTGCTGAGGTTCACATGGAAAAAGTAGAGATTCTTTCTGCTGAAATAGCACGGTTGAAG GCCTTACTAGATTCGAAGCTGGAAACAGAGGCTAGTGAGAACAAGATTGTATTGGAGCTGCAGGCTGAGATAGAAGCTCT AAAGCTAGAACTTGAAAAGGCAAAGGGTTATGATGAAAAGTTGATGGAGAAAGAGACTTATATTGAACAGCTTAATGTGG AGTTTGAAGCCGCGAAGTTGGCTGAATCTTACGCACACTGTATGCTAGAGGAGTGGACCAGAAAAGTTGAGGAGCTAGAA ATGAGGGTTGAAGAAGCAAATAAGTTAGAGAGATCTGCATCATTATCTTTGGAATCTGTAATGAAAGAGCTAGAAGGAAA TAATGATTTGTTGCACGATGCAGAATCTGAAATTTCTAGTCTTAAAGAGAAGGTGGGATTGTTGGAAATGACAATTGGTA GACAGAGAGCAGATCTTGAGGATTCAGAGCATCGTCTTCTTGTGGCTAAGGATGAAAGTCTTGAAATGTCAAAGAAGATT GAGTTTCTCAAATCCGAACTTGAGACAGTTAATGAAGAAAAGGCTCAGGCTTTGAAGAATGAAAGGGTTGCAGCTTCAAG CGTGCAGTCCCTGATAGACGAGAAAAACAAACTTATTAATGAATTGGAGATTTGTAGAGATGAAGAAGAAAAGACTAAAA ATGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCCGAGGCTAGAGATGCCAAAGAAAAGCTATTAGCCAAC CAAGCTGAACATGAATTCTATGAGGCCAAGATTGAAGATTTAAAGTCGGGTTTGAAAGCTACTGACGAGAAATATGAGTC CATGCTTAATGATGCGCGACATGAGATTGATGTTCTGACTTGTAGTGTTGAAAACCATAAGAATGACATCGAGAACTCTA AGGCAGAGTGGGAGCAGAAAGAACTTCATCTTGTCAATTGCTTAAAGCTAACAGAAGAAGAAAACTCATCCTTGGGTAAA GAAATAAATAGATTGATTTATTCACTCAAGAAAACGGAGGAAGAAGCTAGTGCCAAGAAGGAGGAAGAAGCTCAACTGAA GGAAAACCTGAAGGAAGTTGAGGCTGAAGTGATCCACCTGCAGGAAGCACTTAAAGAAGAAAGTGCTCAGAGCATGAAAT TGAAGGAGAGGTTATTGGATAAAGAAAATGAGTTTCAAAACATTTTTCAAGAAAATGAGGACCTCCGATCCAGGGAATCC ACATCTATTAAGAAGGTTGAGGAGTTATCTAAGCTGCTTGAAGAAGCTACAATCAGAAACCATGCTGAAGAAGAAAATGG GGATCATACAGACAGTGAAAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTCTCGGAAGAAAATGGACATGGAGGTG AGGACATATCTAAAGTAGAGGTTTCCGCCAATGAAGAGAACGGACTCGGACGAAGCTCGCTGGAAGAAAGTATTCTCTTG AATGACAAGTCTGAAAAAACTGAATCTCCCAAACCTGAGAATGTGAATGGAAAACTGAAGGAAGATGAGAGCAGAGAAAA AAGTGATTCAGTAGAAGGGGAATTTAAAATGTGGGAAAGCTGCACGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGTAC CAAAGCCTGTATCCTATGAAGAGGAGGAAGTTGAGTCAAAGAAAGAAGATAGTGTGGGCGTTGAGCAGATAAATGGAGGC TCTGTAACCGAGAACATTGATAATGGTGGTAGCTCACCCTCTAAGCAACAAGTGAAGAAGAAGAAGAAGGCTTTGCTTGT TAAGTTTGGAAGCCTGCTGAAGAAAAAGGGTGGTAGCAACCACAAATAGAAAAGTGCTGTACTTTGAACATGACACTGTT TGCATCTATTTGCTTTATATTTTTTCTTCTTGAAATAGCTTTTAAAGAATGATGAGGCTTGTAATGTTGTTTAGGATTCT TCTCTAATCACTTCTTTTGGGTTGAGATTTTCCATGTTGGTAGTAAATTGTATGTGCTGGAATGGAATTACTATTTTTTT TCCCCTTTTATTGCTTTGACCCTCCTTTATAGATTTGAAGAAAGTGGCTAAGATGGCTTGTAATTTCATGCCACCCCTAT TCTAATGAAAGTTCAGTTTTAATGTTTCTCAATAGATACATAGTGCAAAATTAGTGTTTATCTTTACTTGCTACAACTCT GTTAATCAACCAAAATAATTTCTATACCTTAATGGCTTTTTGATAAAAATTCTAAGAAAGAATAATATTTCAC
CDS sequence (LotjaGi2g1v0451100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCGAAGTCCAGATCCGGTTTATCTGAAACTCCCAACAAAGCACCACCAGCTACTCCTAACAAAGCACGGCCGTC AACTCCCAACAAAGGATCACCTGCAACTCCAAGAGTTAGTAAACTCGGCAAAGGAGTGTCCAAACCGGATTCCGAGTCGC CATCGCCTTTGCAGAATTCTCGCATTTCTGCAGAGAAATCGATATCTCCTTTGCAGAGTACGCGTCTTTCTGCAGAGAAA TTGCCATCACCTTTGCAGAATTCGCGTCTTCCTGCAGAGAAATCGCCACGATCTTTAAATTCAAAGCCCATTGCTGAGCG GAAATCACCAAGGCCCACCTCCACCACACCTGATAAGCAACCCCTAAAAGCTGCGAAGGGTTCAGAATTGCAAATCCAGT TAAATCTTGCTCAAGAAGATCTAAATAAAGCAAAGGAACAGCTGATTCAGGCTGAGAAAGAAAAGGCAAAAGCAATTGAT GAGCTAAAAGAAGCACAGAGAGTGGCTGAGGAAGCAAATGAGAAACTCAGGGAGGCAATGGTGGCTCAAAAGCGGGCTGA GGAGGACTCTGAGATCGAGAAGTTCCGAGCTGTTGAATTGGAACAGGCTGGACTTGAAGCTGTTCAGAAGAAGGATGAAG AATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCTTTGGATGTGGCTTCTCTTCTCTCCACCGCTCAGGAGCTT CAGCGCGTTAAGCAAGAACTTGTCATGACTTGTGATGCAAAGAACCAGGCTTTGAGTCATGCTGAAGATGCAACTAAAAT TGCTGAGGTTCACATGGAAAAAGTAGAGATTCTTTCTGCTGAAATAGCACGGTTGAAGGCCTTACTAGATTCGAAGCTGG AAACAGAGGCTAGTGAGAACAAGATTGTATTGGAGCTGCAGGCTGAGATAGAAGCTCTAAAGCTAGAACTTGAAAAGGCA AAGGGTTATGATGAAAAGTTGATGGAGAAAGAGACTTATATTGAACAGCTTAATGTGGAGTTTGAAGCCGCGAAGTTGGC TGAATCTTACGCACACTGTATGCTAGAGGAGTGGACCAGAAAAGTTGAGGAGCTAGAAATGAGGGTTGAAGAAGCAAATA AGTTAGAGAGATCTGCATCATTATCTTTGGAATCTGTAATGAAAGAGCTAGAAGGAAATAATGATTTGTTGCACGATGCA GAATCTGAAATTTCTAGTCTTAAAGAGAAGGTGGGATTGTTGGAAATGACAATTGGTAGACAGAGAGCAGATCTTGAGGA TTCAGAGCATCGTCTTCTTGTGGCTAAGGATGAAAGTCTTGAAATGTCAAAGAAGATTGAGTTTCTCAAATCCGAACTTG AGACAGTTAATGAAGAAAAGGCTCAGGCTTTGAAGAATGAAAGGGTTGCAGCTTCAAGCGTGCAGTCCCTGATAGACGAG AAAAACAAACTTATTAATGAATTGGAGATTTGTAGAGATGAAGAAGAAAAGACTAAAAATGCAATGGAAAGCTTAGCTTC TGCATTACATGAAGTATCTGCCGAGGCTAGAGATGCCAAAGAAAAGCTATTAGCCAACCAAGCTGAACATGAATTCTATG AGGCCAAGATTGAAGATTTAAAGTCGGGTTTGAAAGCTACTGACGAGAAATATGAGTCCATGCTTAATGATGCGCGACAT GAGATTGATGTTCTGACTTGTAGTGTTGAAAACCATAAGAATGACATCGAGAACTCTAAGGCAGAGTGGGAGCAGAAAGA ACTTCATCTTGTCAATTGCTTAAAGCTAACAGAAGAAGAAAACTCATCCTTGGGTAAAGAAATAAATAGATTGATTTATT CACTCAAGAAAACGGAGGAAGAAGCTAGTGCCAAGAAGGAGGAAGAAGCTCAACTGAAGGAAAACCTGAAGGAAGTTGAG GCTGAAGTGATCCACCTGCAGGAAGCACTTAAAGAAGAAAGTGCTCAGAGCATGAAATTGAAGGAGAGGTTATTGGATAA AGAAAATGAGTTTCAAAACATTTTTCAAGAAAATGAGGACCTCCGATCCAGGGAATCCACATCTATTAAGAAGGTTGAGG AGTTATCTAAGCTGCTTGAAGAAGCTACAATCAGAAACCATGCTGAAGAAGAAAATGGGGATCATACAGACAGTGAAAAG GACTATGATTTGCTTCCTAAAGTAGTTGAATTCTCGGAAGAAAATGGACATGGAGGTGAGGACATATCTAAAGTAGAGGT TTCCGCCAATGAAGAGAACGGACTCGGACGAAGCTCGCTGGAAGAAAGTATTCTCTTGAATGACAAGTCTGAAAAAACTG AATCTCCCAAACCTGAGAATGTGAATGGAAAACTGAAGGAAGATGAGAGCAGAGAAAAAAGTGATTCAGTAGAAGGGGAA TTTAAAATGTGGGAAAGCTGCACGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGTACCAAAGCCTGTATCCTATGAAGA GGAGGAAGTTGAGTCAAAGAAAGAAGATAGTGTGGGCGTTGAGCAGATAAATGGAGGCTCTGTAACCGAGAACATTGATA ATGGTGGTAGCTCACCCTCTAAGCAACAAGTGAAGAAGAAGAAGAAGGCTTTGCTTGTTAAGTTTGGAAGCCTGCTGAAG AAAAAGGGTGGTAGCAACCACAAATAG
Protein sequence (LotjaGi2g1v0451100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASKSRSGLSETPNKAPPATPNKARPSTPNKGSPATPRVSKLGKGVSKPDSESPSPLQNSRISAEKSISPLQSTRLSAEK LPSPLQNSRLPAEKSPRSLNSKPIAERKSPRPTSTTPDKQPLKAAKGSELQIQLNLAQEDLNKAKEQLIQAEKEKAKAID ELKEAQRVAEEANEKLREAMVAQKRAEEDSEIEKFRAVELEQAGLEAVQKKDEEWQKELESVRNQHALDVASLLSTAQEL QRVKQELVMTCDAKNQALSHAEDATKIAEVHMEKVEILSAEIARLKALLDSKLETEASENKIVLELQAEIEALKLELEKA KGYDEKLMEKETYIEQLNVEFEAAKLAESYAHCMLEEWTRKVEELEMRVEEANKLERSASLSLESVMKELEGNNDLLHDA ESEISSLKEKVGLLEMTIGRQRADLEDSEHRLLVAKDESLEMSKKIEFLKSELETVNEEKAQALKNERVAASSVQSLIDE KNKLINELEICRDEEEKTKNAMESLASALHEVSAEARDAKEKLLANQAEHEFYEAKIEDLKSGLKATDEKYESMLNDARH EIDVLTCSVENHKNDIENSKAEWEQKELHLVNCLKLTEEENSSLGKEINRLIYSLKKTEEEASAKKEEEAQLKENLKEVE AEVIHLQEALKEESAQSMKLKERLLDKENEFQNIFQENEDLRSRESTSIKKVEELSKLLEEATIRNHAEEENGDHTDSEK DYDLLPKVVEFSEENGHGGEDISKVEVSANEENGLGRSSLEESILLNDKSEKTESPKPENVNGKLKEDESREKSDSVEGE FKMWESCTIEKKEFSPERVPKPVSYEEEEVESKKEDSVGVEQINGGSVTENIDNGGSSPSKQQVKKKKKALLVKFGSLLK KKGGSNHK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 68 | 68 | 0.0 | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| MobiDBLite | 1 | 128 | 128 | - | – | |
| PANTHER | 1 | 68 | 68 | 0.0 | – | |
| MobiDBLite | 51 | 95 | 45 | - | – | |
| PANTHER | 81 | 888 | 808 | 0.0 | – | |
| PANTHER | 81 | 888 | 808 | 0.0 | – | |
| MobiDBLite | 107 | 121 | 15 | - | – | |
| Coils | 127 | 189 | 63 | - | – | |
| Pfam | 129 | 674 | 546 | 1.9E-12 | ||
| Coils | 205 | 225 | 21 | - | – | |
| Coils | 268 | 295 | 28 | - | – | |
| Coils | 303 | 323 | 21 | - | – | |
| Coils | 355 | 375 | 21 | - | – | |
| Coils | 383 | 417 | 35 | - | – | |
| Coils | 439 | 466 | 28 | - | – | |
| Coils | 474 | 550 | 77 | - | – | |
| Coils | 555 | 582 | 28 | - | – | |
| Coils | 608 | 684 | 77 | - | – | |
| CDD | 631 | 696 | 66 | 4.03451E-4 | – | |
| Coils | 692 | 712 | 21 | - | – | |
| MobiDBLite | 704 | 868 | 165 | - | – | |
| MobiDBLite | 704 | 747 | 44 | - | – | |
| MobiDBLite | 764 | 838 | 75 | - | – | |
| MobiDBLite | 842 | 861 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0451100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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