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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0451100 |
| Transcript ID | LotjaGi2g1v0451100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WEB family protein, chloroplastic; TAIR: AT5G16730.1 weak chloroplast movement under blue light protein (DUF827); Swiss-Prot: sp|Q9LFE4|Y5673_ARATH WEB family protein At5g16730, chloroplastic; TrEMBL-Plants: tr|A0A0S3T679|A0A0S3T679_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0451100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94436862..94440051) extracted from Lotus japonicus Gifu genome v1.2.
CTAATTCTCAATTCTCGGTGATAATTACTATGTCTCTTCTTTTCTTTTGGTTTTGCCTGGTGAGTGTTTATTGTTTGATG AGTTTGGCTTGTCAAATGCCAATGCTTCTAGATATTACTGAATTTGGTGTGATGAGTTGGTTTCATTAGGCTTAGATCCA TTTATCCGATTGCATACTAATATGGAATTTTTGCTAGTTTATATAGTATCTTGTCTTTTTTCTGTTTCATTTAATGCTTT TGTTTGATATGGAATTGGCATTGTGAATCTTATAGATCCGGTTTATCTGAAACTCCCAACAAAGCACCACCAGCTACTCC TAACAAAGCACGGCCGTCAACTCCCAACAAAGGATCACCTGCAACTCCAAGAGTTAGTAAACTCGGCAAAGGAGTGTCCA AACCGGATTCCGAGTCGCCATCGCCTTTGCAGAATTCTCGCATTTCTGCAGAGAAATCGATATCTCCTTTGCAGAGTACG CGTCTTTCTGCAGAGAAATTGCCATCACCTTTGCAGAATTCGCGTCTTCCTGCAGAGAAATCGCCACGATCTTTAAATTC AAAGCCCATTGCTGAGCGGAAATCACCAAGGCCCACCTCCACCACACCTGATGTAAGTTATAGTATATACACTTTGTTTC CTCATTAACTTTAAGATTCAGTCATGTTTAGCCCTGTTACTAAATACTCGAATAGTTCGACTTTTTTCGATATCTGTTTT TAAATATCCAGTCCAGTATGTGGTAGTGAACTGCTGAAGATGTTTCCTTCATTATGCTTGATAGTTGACGATACAACAAT AAAAAATATCTATTGTCATGCTTTTCTTTGGTTATCTGTATTCTGATATGTGTTTATTATGTTCTTTGATTGTTCAGAAG CAACCCCTAAAAGCTGCGAAGGGTTCAGAATTGCAAATCCAGTTAAATCTTGCTCAAGAAGATCTAAATAAAGCAAAGGA ACAGCTGATTCAGGCTGAGAAAGAAAAGGCAAAAGCAATTGATGAGCTAAAAGAAGCACAGAGAGTGGCTGAGGAAGCAA ATGAGAAACTCAGGGAGGCAATGGTGGCTCAAAAGCGGGCTGAGGAGGACTCTGAGATCGAGAAGTTCCGAGCTGTTGAA TTGGAACAGGCTGGACTTGAAGCTGTTCAGAAGAAGGATGAAGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCA TGCTTTGGATGTGGCTTCTCTTCTCTCCACCGCTCAGGAGCTTCAGCGCGTTAAGCAAGAACTTGTCATGACTTGTGATG CAAAGAACCAGGCTTTGAGTCATGCTGAAGATGCAACTAAAATTGCTGAGGTTCACATGGAAAAAGTAGAGATTCTTTCT GCTGAAATAGCACGGTTGAAGGCCTTACTAGATTCGAAGCTGGAAACAGAGGCTAGTGAGAACAAGATTGTATTGGAGCT GCAGGCTGAGATAGAAGCTCTAAAGCTAGAACTTGAAAAGGCAAAGGGTTATGATGAAAAGTTGATGGAGAAAGAGACTT ATATTGAACAGCTTAATGTGGAGTTTGAAGCCGCGAAGTTGGCTGAATCTTACGCACACTGTATGCTAGAGGAGTGGACC AGAAAAGTTGAGGAGCTAGAAATGAGGGTTGAAGAAGCAAATAAGTTAGAGAGATCTGCATCATTATCTTTGGAATCTGT AATGAAAGAGCTAGAAGGAAATAATGATTTGTTGCACGATGCAGAATCTGAAATTTCTAGTCTTAAAGAGAAGGTGGGAT TGTTGGAAATGACAATTGGTAGACAGAGAGCAGATCTTGAGGATTCAGAGCATCGTCTTCTTGTGGCTAAGGATGAAAGT CTTGAAATGTCAAAGAAGATTGAGTTTCTCAAATCCGAACTTGAGACAGTTAATGAAGAAAAGGCTCAGGCTTTGAAGAA TGAAAGGGTTGCAGCTTCAAGCGTGCAGTCCCTGATAGACGAGAAAAACAAACTTATTAATGAATTGGAGATTTGTAGAG ATGAAGAAGAAAAGACTAAAAATGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCCGAGGCTAGAGATGCC AAAGAAAAGCTATTAGCCAACCAAGCTGAACATGAATTCTATGAGGCCAAGATTGAAGATTTAAAGTCGGGTTTGAAAGC TACTGACGAGAAATATGAGTCCATGCTTAATGATGCGCGACATGAGATTGATGTTCTGACTTGTAGTGTTGAAAACCATA AGAATGACATCGAGAACTCTAAGGCAGAGTGGGAGCAGAAAGAACTTCATCTTGTCAATTGCTTAAAGCTAACAGAAGAA GAAAACTCATCCTTGGGTAAAGAAATAAATAGATTGATTTATTCACTCAAGAAAACGGAGGAAGAAGCTAGTGCCAAGAA GGAGGAAGAAGCTCAACTGAAGGAAAACCTGAAGGAAGTTGAGGCTGAAGTGATCCACCTGCAGGAAGCACTTAAAGAAG AAAGTGCTCAGAGCATGAAATTGAAGGAGAGGTTATTGGATAAAGAAAATGAGTTTCAAAACATTTTTCAAGAAAATGAG GACCTCCGATCCAGGGAATCCACATCTATTAAGAAGGTTGAGGAGTTATCTAAGCTGCTTGAAGAAGCTACAATCAGAAA CCATGCTGAAGAAGAAAATGGGGATCATACAGACAGTGAAAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTCTCGG AAGAAAATGGACATGGAGGTGAGGACATATCTAAAGTAGAGGTTTCCGCCAATGAAGAGAACGGACTCGGACGAAGCTCG CTGGAAGAAAGTATTCTCTTGAATGACAAGTCTGAAAAAACTGAATCTCCCAAACCTGAGAATGTGAATGGAAAACTGAA GGAAGATGAGAGCAGAGAAAAAAGTGATTCAGTAGAAGGGGAATTTAAAATGTGGGAAAGCTGCACGATAGAGAAAAAGG AGTTCTCACCAGAGAGAGTACCAAAGCCTGTATCCTATGAAGAGGAGGAAGTTGAGTCAAAGAAAGAAGATAGTGTGGGC GTTGAGCAGATAAATGGAGGCTCTGTAACCGAGAACATTGATAATGGTGGTAGCTCACCCTCTAAGCAACAAGTGAAGAA GAAGAAGAAGGCTTTGCTTGTTAAGTTTGGAAGCCTGCTGAAGAAAAAGGGTGGTAGCAACCACAAATAG
CDS sequence (LotjaGi2g1v0451100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACGATCTTTAAATTCAAAGCCCATTGCTGAGCGGAAATCACCAAGGCCCACCTCCACCACACCTGATAAGCAACC CCTAAAAGCTGCGAAGGGTTCAGAATTGCAAATCCAGTTAAATCTTGCTCAAGAAGATCTAAATAAAGCAAAGGAACAGC TGATTCAGGCTGAGAAAGAAAAGGCAAAAGCAATTGATGAGCTAAAAGAAGCACAGAGAGTGGCTGAGGAAGCAAATGAG AAACTCAGGGAGGCAATGGTGGCTCAAAAGCGGGCTGAGGAGGACTCTGAGATCGAGAAGTTCCGAGCTGTTGAATTGGA ACAGGCTGGACTTGAAGCTGTTCAGAAGAAGGATGAAGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCTT TGGATGTGGCTTCTCTTCTCTCCACCGCTCAGGAGCTTCAGCGCGTTAAGCAAGAACTTGTCATGACTTGTGATGCAAAG AACCAGGCTTTGAGTCATGCTGAAGATGCAACTAAAATTGCTGAGGTTCACATGGAAAAAGTAGAGATTCTTTCTGCTGA AATAGCACGGTTGAAGGCCTTACTAGATTCGAAGCTGGAAACAGAGGCTAGTGAGAACAAGATTGTATTGGAGCTGCAGG CTGAGATAGAAGCTCTAAAGCTAGAACTTGAAAAGGCAAAGGGTTATGATGAAAAGTTGATGGAGAAAGAGACTTATATT GAACAGCTTAATGTGGAGTTTGAAGCCGCGAAGTTGGCTGAATCTTACGCACACTGTATGCTAGAGGAGTGGACCAGAAA AGTTGAGGAGCTAGAAATGAGGGTTGAAGAAGCAAATAAGTTAGAGAGATCTGCATCATTATCTTTGGAATCTGTAATGA AAGAGCTAGAAGGAAATAATGATTTGTTGCACGATGCAGAATCTGAAATTTCTAGTCTTAAAGAGAAGGTGGGATTGTTG GAAATGACAATTGGTAGACAGAGAGCAGATCTTGAGGATTCAGAGCATCGTCTTCTTGTGGCTAAGGATGAAAGTCTTGA AATGTCAAAGAAGATTGAGTTTCTCAAATCCGAACTTGAGACAGTTAATGAAGAAAAGGCTCAGGCTTTGAAGAATGAAA GGGTTGCAGCTTCAAGCGTGCAGTCCCTGATAGACGAGAAAAACAAACTTATTAATGAATTGGAGATTTGTAGAGATGAA GAAGAAAAGACTAAAAATGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCCGAGGCTAGAGATGCCAAAGA AAAGCTATTAGCCAACCAAGCTGAACATGAATTCTATGAGGCCAAGATTGAAGATTTAAAGTCGGGTTTGAAAGCTACTG ACGAGAAATATGAGTCCATGCTTAATGATGCGCGACATGAGATTGATGTTCTGACTTGTAGTGTTGAAAACCATAAGAAT GACATCGAGAACTCTAAGGCAGAGTGGGAGCAGAAAGAACTTCATCTTGTCAATTGCTTAAAGCTAACAGAAGAAGAAAA CTCATCCTTGGGTAAAGAAATAAATAGATTGATTTATTCACTCAAGAAAACGGAGGAAGAAGCTAGTGCCAAGAAGGAGG AAGAAGCTCAACTGAAGGAAAACCTGAAGGAAGTTGAGGCTGAAGTGATCCACCTGCAGGAAGCACTTAAAGAAGAAAGT GCTCAGAGCATGAAATTGAAGGAGAGGTTATTGGATAAAGAAAATGAGTTTCAAAACATTTTTCAAGAAAATGAGGACCT CCGATCCAGGGAATCCACATCTATTAAGAAGGTTGAGGAGTTATCTAAGCTGCTTGAAGAAGCTACAATCAGAAACCATG CTGAAGAAGAAAATGGGGATCATACAGACAGTGAAAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTCTCGGAAGAA AATGGACATGGAGGTGAGGACATATCTAAAGTAGAGGTTTCCGCCAATGAAGAGAACGGACTCGGACGAAGCTCGCTGGA AGAAAGTATTCTCTTGAATGACAAGTCTGAAAAAACTGAATCTCCCAAACCTGAGAATGTGAATGGAAAACTGAAGGAAG ATGAGAGCAGAGAAAAAAGTGATTCAGTAGAAGGGGAATTTAAAATGTGGGAAAGCTGCACGATAGAGAAAAAGGAGTTC TCACCAGAGAGAGTACCAAAGCCTGTATCCTATGAAGAGGAGGAAGTTGAGTCAAAGAAAGAAGATAGTGTGGGCGTTGA GCAGATAAATGGAGGCTCTGTAACCGAGAACATTGATAATGGTGGTAGCTCACCCTCTAAGCAACAAGTGAAGAAGAAGA AGAAGGCTTTGCTTGTTAAGTTTGGAAGCCTGCTGAAGAAAAAGGGTGGTAGCAACCACAAATAG
Protein sequence (LotjaGi2g1v0451100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPRSLNSKPIAERKSPRPTSTTPDKQPLKAAKGSELQIQLNLAQEDLNKAKEQLIQAEKEKAKAIDELKEAQRVAEEANE KLREAMVAQKRAEEDSEIEKFRAVELEQAGLEAVQKKDEEWQKELESVRNQHALDVASLLSTAQELQRVKQELVMTCDAK NQALSHAEDATKIAEVHMEKVEILSAEIARLKALLDSKLETEASENKIVLELQAEIEALKLELEKAKGYDEKLMEKETYI EQLNVEFEAAKLAESYAHCMLEEWTRKVEELEMRVEEANKLERSASLSLESVMKELEGNNDLLHDAESEISSLKEKVGLL EMTIGRQRADLEDSEHRLLVAKDESLEMSKKIEFLKSELETVNEEKAQALKNERVAASSVQSLIDEKNKLINELEICRDE EEKTKNAMESLASALHEVSAEARDAKEKLLANQAEHEFYEAKIEDLKSGLKATDEKYESMLNDARHEIDVLTCSVENHKN DIENSKAEWEQKELHLVNCLKLTEEENSSLGKEINRLIYSLKKTEEEASAKKEEEAQLKENLKEVEAEVIHLQEALKEES AQSMKLKERLLDKENEFQNIFQENEDLRSRESTSIKKVEELSKLLEEATIRNHAEEENGDHTDSEKDYDLLPKVVEFSEE NGHGGEDISKVEVSANEENGLGRSSLEESILLNDKSEKTESPKPENVNGKLKEDESREKSDSVEGEFKMWESCTIEKKEF SPERVPKPVSYEEEEVESKKEDSVGVEQINGGSVTENIDNGGSSPSKQQVKKKKKALLVKFGSLLKKKGGSNHK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 2 | 794 | 793 | 0.0 | – | |
| PANTHER | 2 | 794 | 793 | 0.0 | – | |
| MobiDBLite | 13 | 27 | 15 | - | – | |
| Coils | 33 | 95 | 63 | - | – | |
| Pfam | 35 | 580 | 546 | 1.6E-12 | ||
| Coils | 111 | 131 | 21 | - | – | |
| Coils | 174 | 201 | 28 | - | – | |
| Coils | 209 | 229 | 21 | - | – | |
| Coils | 261 | 281 | 21 | - | – | |
| Coils | 289 | 323 | 35 | - | – | |
| Coils | 345 | 372 | 28 | - | – | |
| Coils | 380 | 456 | 77 | - | – | |
| Coils | 461 | 488 | 28 | - | – | |
| Coils | 514 | 590 | 77 | - | – | |
| CDD | 537 | 602 | 66 | 4.4063E-4 | – | |
| Coils | 598 | 618 | 21 | - | – | |
| MobiDBLite | 610 | 653 | 44 | - | – | |
| MobiDBLite | 610 | 774 | 165 | - | – | |
| MobiDBLite | 670 | 744 | 75 | - | – | |
| MobiDBLite | 748 | 767 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0451100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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