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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0451800 |
Transcript ID | LotjaGi2g1v0451800.2 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Zinc knuckle (CCHC-type) family protein, putative; TAIR: AT5G43630.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P04934|MSP1_PLAFC Merozoite surface protein 1; TrEMBL-Plants: tr|K7K5H3|K7K5H3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0451800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94498338..94506937) extracted from Lotus japonicus Gifu genome v1.2.
TGCAGGAAAAAAACTCCAACTAAAATAGTTATCCCAATTCCCAACCAACGTGTGAATCTTCCCGGCTATATACGATAGGT TCAGTGAATAAAGAAGCAAGATATACTACTGCTACACTCTGCTAGTTAATTAATTCATGTCTCATAACGTGTAATGAATT ATCACTGTACGATATTCAAGAGTTACCAATTATACGTGGGTAGTCGATCATTGGCAAAGAATGTCTCCACGTGGCAGATC ATGAACCTCATGTAGCTGAATAACAGGTAAGCACCTTCATGTATCTGTTATGGCATGACGGCTGGCAGACATAACATGTC TTGCTACTGCTTGGTGCTTGCTATACTCCACTTTCTCTCTCTCACCACAATCTAAAAACGTTCTTTCTGCTCCACTTCCT CATATAGATAGTACTTGCCTCATCGTTTAGTGTGGATCAAACAAAACAGGTATGCATCATTTCTCACTCTCTTTTGTATT GCTACTGACCCTTTTGGAATGAATGACCTTTTCTATGTATGCCCAATGGAAGAAAGATTTTGACTTCATGTTATAGTCAA TTTATCCTTAGAAGATAGATACCTTGTACAAGGTTTATCTGTAACACATGCTTGAGTTGGGTGTGGATGTGAGGGCTATA ATAAGAAAACAGGCAGGGTAGAAACACTTTATGGTTGTTATTGGGGTCATGGGGTGTGGTTGATCCTAGGAAGAATCTAT TGGCTTGTGTTATCTTTGAAGTTTGTAGGATGGCATACAAGTTTTACTCATATTATCGTTATCCAAGATATGCCAACGAT GAATTCAGTCATGTTCATGTTTGGATACAGACTAAAGAGAATTACTTACTGAAGCTTATCTACTTGAAAAAGGTTCCTAT TAGTGCTCTTTGGTGGGCTTCCGAACGGACTCGAAACCTTTAATACCAAGAATATGTTCCATAGTTTGTTATTTTTCTTT CTCTTGTGTTTTTGCTGTTATGGCAGTAGTCAAATGTGTACAGACAGGAACTGCTGCACCTTCCAACTTAACCTTTTGTA CTGGTGGTCATTGTATTAGACTATCCTTGGTGAAATTATGTAGAATTGGATCCTCACTACTCCCATTCTTCTAATTGAAT TAATTTCAATTTCAGCACTAGGTGATGGTGATCCTATTCTTTGTCCATGCCTAATATTGCTAGTAACTTGGTAATTTCAG CAGAAGGAAACATGTTAGAGATGCAAACCATTCATATGCCAGTGCCTAATAACTTGGTCTTTTGGTATGAATTGTCCTTG ACACTGTTTTCAACTTCATCACATCCTGCATTTTTTATAATGCTTAAATTAACGCTAGTTGTTTTTCCCCATATAGGAGG AATAGGTAGAACAAATGTGTGTGTTCATGGTGTCTTCTAATAAGATGTATATCAGAAAACCAATTAATAAGTAACCCATA ATTCGGTCAAATAATTTGATGCTGGGCTTAGTGTTATGGAATTAGTTTACTTAACTTTACATTTTTATATATGCCCTGCA TTCCTAATTTTCATTTTAAGTGCTACATAGGAGGTTAATTCTGATTGTAATAACATTTCAGGAGTTTGTGAAGATTTTAT CCCTCTGAAGATGAGTGAAGAAAACGAGTTTAAATCAAATACTGATAATGAACATTTTCAAAATAATGCTAACCACTGCA TTTGGAAAATTTTGAAAAATGACCCGCGTGCAGGTGCAAATGCAGCTTCCAGGGTTGATCTGACATTTGCTGCCACTGAT CCCCTATCTGAGATAGTTTGGTCTCCTAGTAAAGGTTTGAGAATTCAATGTGCTGATTCAAGCTTTGCTGATCAGAGTAG TTATCTTTTTCGGGATGTTGGACCAAGCTGTATGGTTCTTTCTCCACCACAAAGTGTAACTGGCGGCAGGCTTACCGCTG ATGAACCTGTGGGTGATGTTCTTGTAAAACCTATAGCTGTCATATGTACCAACAGTGATATTGCTGCAACATATGCTTCT ACTATGAATCCAACTACTGATTCAGGTGTCAACCCTGAGTGTAAAGTATATGAAGAAAATGATATAGGTAATGACAGAAT CTTCTTGCTCATCCCCTATAGATGCATGGAAAGGGGGTTTACTGTAAACTTTTAGGCTTTAATAAACCTTATTGAAGGAC AAAGAAATGCACCAGTTATCTTAATTAGTTGAATGGCTTATTGGGAATTATGATCTTGCTTAGTTTCTTACCAGTCACTT TTTCCTGGAATCATTTTTCTCAATCATACAGAACTCTTATCTGGCAGGAGCTGGATCTAGTGGTAATAAGGAGGAAATGA ACACTTCAGAAAGAGCACCTAATTTGTCTAATGATCAAAATGAGAATCTAGCAAATGATTGGGAGAAGAGTACTGGTGGT GATCAAGCCAAGATTGGAACTGATCAAATATCTGGGACAACGGGAAACAAATTTTCTGCTATTTCAGGTATGTGTTGTCA TCAAGGTAGTTAAGAGGCAAAATCCTCCCTTGTGGTACTGAGTTTTAATGCCTTAGGCAAGAGCTTCCAAAAAGCGAATG CATTAGTAAAGGTGTTAACGCTAAAAAATTAAAATAGTAAAATAATTGACTATTATGCATTGACTTTGCTTATAAGTTAA CTATTCAAGCATAAAGTTTGTAGTAAAAATAGAAAAGGTTATGATGTTCAATTTACAAAGTCCTAAGCTGTTGGTAAGAG TTGACAACTAGTTATTCTTTTGACATGTAGATTACTTTTACACCCTTTAGTATCACAGGTGTCATGTTAGATTGCTGGTC TTAGACTTATTCAGTAGTTATTTAGCAAGGTGAGCTCCTGTAATATCACAGTTGGCTTAGTCTAACTTCTTGTCTCAGCA CCTTTGGTGCATCCTTTGGCGCCTTTTAGTCCTGCAATGATATGAATTCAAGCATTTTAGGATGAGGAATGCTAGCAACA CACTCTTTTGAACATGCTCTCCAACAAACTCCATGTGATTGGTTTATTTGTTCAAAAGTCTAACACATTTTCCGAACTTT TTAAAAAATGTGTTGACTTTTTTAAAAATAAGTCAATCACGTAGTGTGTTGAAAAGGCTGTGTTGCTAGGGCTCTTATCT CAGGATACCTTTTAGGCTCTTACTCATTGTTGGAAGTTGGAACACATTATAATTTGTTTGATATTTGTTACTTCTTTTTT ATCTGTATAAAAGGAAAGAATAGCTGATAGTTTACAGGTTGTTAATCTAAATACATAGATTCCATAATTTAAAACATATC CTTTATGTTTAGAGCATAATTTATTGCACATTTTTTGTTTAAGAAAATTCTTCTTTTTGTGCATGCCTGAAATGTGTTAT GCATCCTGATTTTCCTGCAGGTCATGTTGACCAAAGGCCATTTGATGCTTTATTACTTCAATCAGATGAAGCTAAACCTA CCATGGAGCGAAATCCTTCACCAGGGAGACCCTCCATTGGAGGTGTAGATATTGGTACTGGAAAAAAGGCAGTTGTAGAA GATGATTTACATGCTACTGTTGAGCCTATAATTCCAGGAGCTAATGTAACATCCTCCGGCAAGAGTCCTTTAGAAAAATC GGAATCTAGTGCTGAGAATGATATACAACCTGTCAACTGCAATGCTGCATGTCCTGCGACAAGCGGAGTTATTGCTAATG AGATTAAAAACAAATCTCATGACAAAAAAATGATTCTATTATGTGATAAAATTCTTCCAGTTATGCATTCTCCATGTAAT AGCAGAATTAATATGTCAAGAAACAAAGGCAAGGAAAAGTCCTTATCAGACGGTGATGCAAATGTAAGATTATCAAAGGA GGAGAATGACAGTCAATCAAGTGTTGAAAGCTGTAACAGTACTGAGTTTTTTCCCAAGGGTAAGAAGAGACCTAACTTTC AACAGCAGTTGATTCTTGGGAGTAAAAGAGTGAAGAAAAAGCACGTTGAAGAAACTTCTGGTTCCAAATCCTATGTTAAA AAGGATATTTCATTCATTAACTGGATATCAAACATGGTAAAAGGACTCTCACATTCAATTCAAAATGGTTCAAACACTTT GGCTGTTACTCTCGCAAATCGAGATTATCATGATCTACGGCGGCCTGATGAGAAACTTGTCACATGCAAAATGAGTCAAG ATCCTGGGCCAAAAAATACAGGATTCAAGTCCATTTTTCAGTCCATGTATTGTTCAAGTTTGAAGAATGTAGGAACAAGA ACTTTTCGTCAAGAAGGAGAGGGTAGTGAGGATTTAGAGCCAAGTAACATGGTACAGGGAATTGATGCTACTCCAATAAC CTGTTGTGCAGAGAAAAACAGCTCTTCTGAAGCATGTACTCGGAGATATGATGCTGGTCCGTCCTCGCAGCCTATGATTA TTCATGCAAATATTTTTAACAGTCAGGAAAGCAGCAAAAACAACCCAGTTGAGGATGAAAATTGTTCCATCTTAGGCCTT ATAAAGGAGAAGGAAACAATGGCATCAAATTCATCTTCATCCAGACAAAATACAAATAATACTGAGAATATTGATTCCAC TGCACCATCTGAGAGAAAGGAAGCAGACAATATCTGTCTTGGAAGAGATGCTCCAGGAAATATGTGGATAACTCGATTTT CTCCAAAATCGACTGCACCCTTGGTTATTTCTGATCACCTAGATGAGAGATATGAATCTCAAGTCCACATCAATGATTGC CATAAACACATTTCGTATATGAAGAAAAACTGTAGAATTGAAGAAACTAGAGAACAACCCGCTAATGCCACAGAGGCTTT CACTGGTCTTCATGAAGATAAGGACAATAATGTCCATAATAATTTCAACAGCCTTTCATCTTCCCCAGGATTCAGAAACT CTGTACTGATGACTTCAATGTTTGCAAGGAGATTTGGTGCCATCAAACATACCACACCGACAAACAAAGCAGATTGTACC TCTCAGGTAGTTCTGTTTTGTTTGTTTTGTGGGACAAGAGGTCACCAACTCTGTGATTGCTCAGAAATTGCGGAAGGCGA GCTAGAAGATCTCCAAAAGAATATGAATTCATATGGAGAATTGGAAGGAAGTCCCTGTATATGCATTAAATGTTTTCAGA CTAACCACTGGGCAATTTCATGTCCTACTTCAATCTCAAAAAGGAAACATGAATGGGAAGTTAAACCCTTGGTCAATGAT TGCATTCTTAGCGGAGAACATTTAATCCCAAGCATTGAAGGGAGTTCAAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTT ATCCGGTGGTACTATCAACGATGGAAGTGATCACCAAGCAAATCAGAATATTAATTTGAAGCGGAAATTAAATGAAAAGA CAACCTTCAAGATAGGTTGCAGTGCATCATTCAAGAAACAATGCAGTTCAAGTTCAGAGGAAAACAAATTCAAAGGAAAT CCAATAACATCTCCATCCAGATTGACTGGAAGGCAGATTTCACACATACCAAAAGGAATCTTTGATGCAGTGAAAAAGCT TCGATTGTCCCGCACTGACATCTTGAGGTAATAATGCAAGACGACTAACTAATACTATGTCATTCATGTAAAAAAGCTAG TTGTTGTGTGGTTTATGGCCCGTTTATAAACTGTAAGTAACCTATGATAATTGCTAAATTACATAAGGTTGAAAATAATT CTTCTCAACCCAAGAATTTATGCTTAAATCATAGTGAATTGGTATATGGTAGAGGTCAGATTTTGAAACCATAGTTTTCA GTTGTTCACAATTTTATTTTCCCGGGTTTGGTAGCTTTTCATGAAAGGAACCACTAGGCCTGCAAGGCTTGCACAATCTG GTTAAACAAACATTCAAAAAAACAATATTCATTAGAGGGGAAATCTTTCTAAACTAGATTTGTAAGTATATTGATCTAGA GTGCTGCTTTATGGCTTGAATTTGTTTTATCATTAGGCCGCCCTTGACTCCTCCTTTCTCATATATATGATCATATGGAC CCCTTCAGGGGCGGAGCCAGTATTTTAGTTAGGGGGAGCAAGATTAAAGAGCTGACAAAATATTTTGGATTAAATATACT TTTCATCCATGTAAAATTGAGACATTAGGGTTTTAGTCACAATTAAAATTTCATCTGTTAAGACAATTGAATAAACACAG AAAAGTAGGTTAGTTTTTTATAGACACAGTAAAGTATTTATTTACAAATACTGCTTATGCCTCTTTATTTGATAGGGCAA GAGCCTCTATTTTGCTAATTTTCCTGGCTGGTAAAGTATTAACTGAAAACAAAAGGAACAATGAACATAACTTGTGTCTA AAAATAGGCAGAGACCTTATCTAAAAATACTGTACTTTTCTCACTTATAAAACACTTGGATCTGTGACTTTTACTGAACA GAATGTCCTTTACATTAGATGGATAAATGCTGATCGGTCAAAACTTGATGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGT GGGAAGAAGGGCTAGGTGGAACTGGATACCATGTGGCATATATAAATGGTATAACTAAAATCACAACTTATTCTTTGAAT GTGAAATATGCATGAATTAAGTTACTTTACCTCATTATGGATATCCCTGGAGTTTTTCATTGGTTTGATGAGACTATTGG CGGCTAGTGTTTTATTTTTATTATTTTGTTGGCTTTTTCTTATTTTCTTGTTCTCCTGTATGAACAGAGACCGAAACACA TAGTTCAGAGCAGAATATAAGAAAATCTCTCTCAGTGAAAATGGGGGGGATCAAGTGTATGGTCCAAACTCAGTATATAT CCAATCATGATTTTCTTGAGGTAATAATCAATTCTCATTTCTTAGTTGAGCTTGAGCAATTCTTGTTATAGCATAGTCTG TGCAAGCATAACCAATCAAAAGCTCATTATGCATTAAGATAAAAGACATAGAAACTTCTGCTGAAATTATTTGAATATTA TTGTGTTTTGATTGGTTGTGCCTATAAAGTATAATATAAGCATGCATTGTGCTCATGTGAGAATTGCTCTTATTACTTTT CCCTTGTTTCTTATTGTGTACCTATTGTTATTTAAGCTTTTAGTTTTCATGTCCATTTTGACTTGATTAATGATTTGATT GGAAGCCGAAAGAAAATGTGAAGATAGAAAATGGATGGAAAGAAAAATGTGGAAAAGAGAAAATGTAAATGAAATTAAAT AAGATTTTTTTTTGTTACAAGGACCCCGGTTACACCCCGGAAAATAAGATGATCTTATATGTCTAGATGGAGGAAAAAAT TAAAGAAAAAAAAGGGGAAACTTCATTTATCTTCCTTGGATGGATGAAATAGTGAGAGGATAGAAATATTATATTGAATG AACTTTATATTCTTTTGAGATAATAGTGAGTAGGTGGATAGATTTATATCTCAATATAATTATCCTTCTATCTCTGTTTC TTCTTATGAGTGTGGAGAAAAAATTAATGTAAATCCCTTTTTTTTTATCTTCCCTGTATTTTATTTCTATTTATAACTAA ACAAAAGAAATTGGTATTGGTGCATGTTTGGATTGAAATTAAGATGGGTTTTAATGGAGTTTTGCAGCTTTCCTCGGTGA AAAAGCCAATGGATCAAAGTTACTGGATTAGGATGAAAATTGCTTTTTCTTAACTTCCATTACACGGAATGTGTTTCCAA ACACAATAATTTTCTCATTTGTCTCGTTTTATGCAGGAAGAAATCATGGAATGGTGGTCTACCAGCTCAGAAGCTGGTGT TCAGATTCCATCAGAAGAAGAGCTGATAAAGAAACTTAAGATGAAAAGAATGTTAGGTCTGTAGAAATTTATTAAGTGTA TATATAAGTAATTACCACATAAGCATTTTGTTCTCTCTCTTTTATATTAGGATGGTAGGATATATTCAGTTTGGGGAAGT TTTCTTAATTTTTTCACTAATAATTATAAACATATTTTTATTTTTAAAGATTTATGTAAAAAACAACAGTGATTCGATTT AAAGGAATTATATATTTATTCATCCAATCACATAAATAATTCATTTGACAGTTTTTTGGTTGTAAGTTTATTAGTTTAAT TTTGTTATTGTTAGTTTCAGCTTAATTGATTATACGCATTTTCTGCATTTGACACCATAAATAAGAGAATAATTATATCT TCACACCTCATTTTTGAGGTGTAGAAAGGTGGAGGAAGAGAGATAGAGAGAAATGAGAGAGAAAGTGAAGATGTGATATG TGATTTGATTGATAGAGAAAAAAGAAATAAATAGAAATAAAAGTGAAAAAGGAGGGGAGAGGTGTGTATATATCATAACT GTCAATAAGACGGTAACAAATGTTTGATCCTATAGTATGTTTTTTCGTACATCAAAATTAGAGGAAGGTGTTTTCAAATG TTTTAGTACATATTTATTTCCAATAATATTTTACAATTTTATTTAATAAAAATGCGAGTGAACATCTTTCCTAAACATAA ATCATGTCCGAGATTTTATTTACATAACTTATATCAAATACAGAAATTTGTATTCTCATATTAAATTAAAAAAAAAAAAA CTTTTAAGATATCTTAAAATAACGCAATCCTAGAATGCCT
CDS sequence (LotjaGi2g1v0451800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGAAGAAAACGAGTTTAAATCAAATACTGATAATGAACATTTTCAAAATAATGCTAACCACTGCATTTGGAAAAT TTTGAAAAATGACCCGCGTGCAGGTGCAAATGCAGCTTCCAGGGTTGATCTGACATTTGCTGCCACTGATCCCCTATCTG AGATAGTTTGGTCTCCTAGTAAAGGTTTGAGAATTCAATGTGCTGATTCAAGCTTTGCTGATCAGAGTAGTTATCTTTTT CGGGATGTTGGACCAAGCTGTATGGTTCTTTCTCCACCACAAAGTGTAACTGGCGGCAGGCTTACCGCTGATGAACCTGT GGGTGATGTTCTTGTAAAACCTATAGCTGTCATATGTACCAACAGTGATATTGCTGCAACATATGCTTCTACTATGAATC CAACTACTGATTCAGGTGTCAACCCTGAGTGTAAAGTATATGAAGAAAATGATATAGGAGCTGGATCTAGTGGTAATAAG GAGGAAATGAACACTTCAGAAAGAGCACCTAATTTGTCTAATGATCAAAATGAGAATCTAGCAAATGATTGGGAGAAGAG TACTGGTGGTGATCAAGCCAAGATTGGAACTGATCAAATATCTGGGACAACGGGAAACAAATTTTCTGCTATTTCAGGTC ATGTTGACCAAAGGCCATTTGATGCTTTATTACTTCAATCAGATGAAGCTAAACCTACCATGGAGCGAAATCCTTCACCA GGGAGACCCTCCATTGGAGGTGTAGATATTGGTACTGGAAAAAAGGCAGTTGTAGAAGATGATTTACATGCTACTGTTGA GCCTATAATTCCAGGAGCTAATGTAACATCCTCCGGCAAGAGTCCTTTAGAAAAATCGGAATCTAGTGCTGAGAATGATA TACAACCTGTCAACTGCAATGCTGCATGTCCTGCGACAAGCGGAGTTATTGCTAATGAGATTAAAAACAAATCTCATGAC AAAAAAATGATTCTATTATGTGATAAAATTCTTCCAGTTATGCATTCTCCATGTAATAGCAGAATTAATATGTCAAGAAA CAAAGGCAAGGAAAAGTCCTTATCAGACGGTGATGCAAATGTAAGATTATCAAAGGAGGAGAATGACAGTCAATCAAGTG TTGAAAGCTGTAACAGTACTGAGTTTTTTCCCAAGGGTAAGAAGAGACCTAACTTTCAACAGCAGTTGATTCTTGGGAGT AAAAGAGTGAAGAAAAAGCACGTTGAAGAAACTTCTGGTTCCAAATCCTATGTTAAAAAGGATATTTCATTCATTAACTG GATATCAAACATGGTAAAAGGACTCTCACATTCAATTCAAAATGGTTCAAACACTTTGGCTGTTACTCTCGCAAATCGAG ATTATCATGATCTACGGCGGCCTGATGAGAAACTTGTCACATGCAAAATGAGTCAAGATCCTGGGCCAAAAAATACAGGA TTCAAGTCCATTTTTCAGTCCATGTATTGTTCAAGTTTGAAGAATGTAGGAACAAGAACTTTTCGTCAAGAAGGAGAGGG TAGTGAGGATTTAGAGCCAAGTAACATGGTACAGGGAATTGATGCTACTCCAATAACCTGTTGTGCAGAGAAAAACAGCT CTTCTGAAGCATGTACTCGGAGATATGATGCTGGTCCGTCCTCGCAGCCTATGATTATTCATGCAAATATTTTTAACAGT CAGGAAAGCAGCAAAAACAACCCAGTTGAGGATGAAAATTGTTCCATCTTAGGCCTTATAAAGGAGAAGGAAACAATGGC ATCAAATTCATCTTCATCCAGACAAAATACAAATAATACTGAGAATATTGATTCCACTGCACCATCTGAGAGAAAGGAAG CAGACAATATCTGTCTTGGAAGAGATGCTCCAGGAAATATGTGGATAACTCGATTTTCTCCAAAATCGACTGCACCCTTG GTTATTTCTGATCACCTAGATGAGAGATATGAATCTCAAGTCCACATCAATGATTGCCATAAACACATTTCGTATATGAA GAAAAACTGTAGAATTGAAGAAACTAGAGAACAACCCGCTAATGCCACAGAGGCTTTCACTGGTCTTCATGAAGATAAGG ACAATAATGTCCATAATAATTTCAACAGCCTTTCATCTTCCCCAGGATTCAGAAACTCTGTACTGATGACTTCAATGTTT GCAAGGAGATTTGGTGCCATCAAACATACCACACCGACAAACAAAGCAGATTGTACCTCTCAGGTAGTTCTGTTTTGTTT GTTTTGTGGGACAAGAGGTCACCAACTCTGTGATTGCTCAGAAATTGCGGAAGGCGAGCTAGAAGATCTCCAAAAGAATA TGAATTCATATGGAGAATTGGAAGGAAGTCCCTGTATATGCATTAAATGTTTTCAGACTAACCACTGGGCAATTTCATGT CCTACTTCAATCTCAAAAAGGAAACATGAATGGGAAGTTAAACCCTTGGTCAATGATTGCATTCTTAGCGGAGAACATTT AATCCCAAGCATTGAAGGGAGTTCAAGGTTTCTGAGTGGTAAGGCTGGCCTAATTTTATCCGGTGGTACTATCAACGATG GAAGTGATCACCAAGCAAATCAGAATATTAATTTGAAGCGGAAATTAAATGAAAAGACAACCTTCAAGATAGGTTGCAGT GCATCATTCAAGAAACAATGCAGTTCAAGTTCAGAGGAAAACAAATTCAAAGGAAATCCAATAACATCTCCATCCAGATT GACTGGAAGGCAGATTTCACACATACCAAAAGGAATCTTTGATGCAGTGAAAAAGCTTCGATTGTCCCGCACTGACATCT TGAGAATGTCCTTTACATTAGATGGATAA
Protein sequence (LotjaGi2g1v0451800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEENEFKSNTDNEHFQNNANHCIWKILKNDPRAGANAASRVDLTFAATDPLSEIVWSPSKGLRIQCADSSFADQSSYLF RDVGPSCMVLSPPQSVTGGRLTADEPVGDVLVKPIAVICTNSDIAATYASTMNPTTDSGVNPECKVYEENDIGAGSSGNK EEMNTSERAPNLSNDQNENLANDWEKSTGGDQAKIGTDQISGTTGNKFSAISGHVDQRPFDALLLQSDEAKPTMERNPSP GRPSIGGVDIGTGKKAVVEDDLHATVEPIIPGANVTSSGKSPLEKSESSAENDIQPVNCNAACPATSGVIANEIKNKSHD KKMILLCDKILPVMHSPCNSRINMSRNKGKEKSLSDGDANVRLSKEENDSQSSVESCNSTEFFPKGKKRPNFQQQLILGS KRVKKKHVEETSGSKSYVKKDISFINWISNMVKGLSHSIQNGSNTLAVTLANRDYHDLRRPDEKLVTCKMSQDPGPKNTG FKSIFQSMYCSSLKNVGTRTFRQEGEGSEDLEPSNMVQGIDATPITCCAEKNSSSEACTRRYDAGPSSQPMIIHANIFNS QESSKNNPVEDENCSILGLIKEKETMASNSSSSRQNTNNTENIDSTAPSERKEADNICLGRDAPGNMWITRFSPKSTAPL VISDHLDERYESQVHINDCHKHISYMKKNCRIEETREQPANATEAFTGLHEDKDNNVHNNFNSLSSSPGFRNSVLMTSMF ARRFGAIKHTTPTNKADCTSQVVLFCLFCGTRGHQLCDCSEIAEGELEDLQKNMNSYGELEGSPCICIKCFQTNHWAISC PTSISKRKHEWEVKPLVNDCILSGEHLIPSIEGSSRFLSGKAGLILSGGTINDGSDHQANQNINLKRKLNEKTTFKIGCS ASFKKQCSSSSEENKFKGNPITSPSRLTGRQISHIPKGIFDAVKKLRLSRTDILRMSFTLDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 20 | 936 | 917 | 1.9E-193 | – | |
PANTHER | 20 | 936 | 917 | 1.9E-193 | – | |
MobiDBLite | 149 | 213 | 65 | - | – | |
MobiDBLite | 157 | 211 | 55 | - | – | |
MobiDBLite | 229 | 251 | 23 | - | – | |
MobiDBLite | 271 | 293 | 23 | - | – | |
MobiDBLite | 341 | 380 | 40 | - | – | |
MobiDBLite | 345 | 369 | 25 | - | – | |
MobiDBLite | 585 | 605 | 21 | - | – | |
MobiDBLite | 585 | 618 | 34 | - | – | |
SMART | 745 | 761 | 17 | 2.8 | ||
Coils | 760 | 780 | 21 | - | – | |
SMART | 786 | 802 | 17 | 0.11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi2g1v0451800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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