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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0453400 |
| Transcript ID | LotjaGi2g1v0453400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 12-oxophytodienoate reductase-like protein; TAIR: AT1G76680.1 12-oxophytodienoate reductase 1; Swiss-Prot: sp|B9FSC8|OPR11_ORYSJ Putative 12-oxophytodienoate reductase 11; TrEMBL-Plants: tr|I3S1Q2|I3S1Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0453400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94671571..94672999) extracted from Lotus japonicus Gifu genome v1.2.
TACCCGCTTCCAATTCAATCATTCAATTATTTCGATCATCAATCAATAACATTATCATTCATTCTTCAATCCACTGCACT GCGCTAATACCAATGGCTTCTCCTAATAACCCTCTTATTACTCCCTACAAGATGGGTAACTTCAATCTCTCCCACAGAAT CGTTTTGGCGCCGCTTACCAGAATGAGATCCTACAACAACGTTCCTCAACCCCATGCTACTCTCTATTACTCTCAGAGAT CTTCCCAAGGAGGCCTTCTCATCGCCGAAGCCACCGGCGTCTCCGACACTGCTCAAGGCTATCCAAACACCCCCGGCATT TGGACAAACGAACAAGTAGAAGCGTGGAAGCCCATTGTGGACGCTGTTCATGCCAAAGGTGCTCTATTCTTCTGTCAGAT TTGGCATGTTGGAAGGGTTTCATCTTCAGGTATATATTTTCATCCTGCACTTGACCTGTTCGATCAAATGCCAATGCTAA TTGACTAATTTTATAATGCTTGTGATGTGTACGATTAATGTGTGTTGTTTTTCATATGATTTTGAACAGCTTTTCAGCCA AACGGGCAAGCACCCATATCTTCCACAGACAAGCCACTCGCACCGCAAGATGGCATGCAATTCACACCACCAAGGCGGCT AAGGGCGGATGAACTTCCTCATATTGTCAATGACTTCAGACTCGCTGCAAGGAATGCTATTGACGCTGGTAACTTCACTC ATCTTTTAACAAATGTTATCATACTTCAATATGCTTCAATCATGATACAATGTGTTTTCAAAAGCTAGGCTGTTCATTTC TTGTTTACTAAACATCTAATATGCCCATTATGGTGCAAATTGTAGGTTTTGATGGGGTTGAGATCCATGGGGCTCATGGC TACCTGCTTGACCAATTTCTGAAAGATCAAGTGAATGACCGGACAGATGAATATGGTGGATCCCTTGAGAACCGTTGTCG ATTTCCATTGGAAGTTGTTGAAGCTGTGGCGAATGAGGTAGGAGCAGAAAGAGTTGGAATTAGATTATCGCCTTTTGCAG ACTATGCAGAATCTGGAGACTCTAGTCCTGACGAATTGGGGCTTTATATGGCTAATGCCCTCAATAAATACAATATTCTG TACTGTCACATGGTAGAGCCGAGAATGAAAACTCTTGGAGAAAAGTTTGAAACCCCTCACAGCCTGGTGCCAATGAGAAA AGCTTTCAATGGAACTTTTATAGTTGCTGGAGGTTATGGACGACAAGATGGGATCAATGCTATAGCTGAAAACAGGGCAG ACCTTGTTGTTTATGGTCGTTTGTTCTTAGCCAATCCAGATCTACCAAAGAGATTTGCGCTTGATGCTCCTCTCAACAAG TATAAGCGGGACACTTTCTACGTTTCTGATCCAGTTGTTGGTTACACCGACTACCCGTTTCTTGAATGA
CDS sequence (LotjaGi2g1v0453400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTCCTAATAACCCTCTTATTACTCCCTACAAGATGGGTAACTTCAATCTCTCCCACAGAATCGTTTTGGCGCC GCTTACCAGAATGAGATCCTACAACAACGTTCCTCAACCCCATGCTACTCTCTATTACTCTCAGAGATCTTCCCAAGGAG GCCTTCTCATCGCCGAAGCCACCGGCGTCTCCGACACTGCTCAAGGCTATCCAAACACCCCCGGCATTTGGACAAACGAA CAAGTAGAAGCGTGGAAGCCCATTGTGGACGCTGTTCATGCCAAAGGTGCTCTATTCTTCTGTCAGATTTGGCATGTTGG AAGGGTTTCATCTTCAGCTTTTCAGCCAAACGGGCAAGCACCCATATCTTCCACAGACAAGCCACTCGCACCGCAAGATG GCATGCAATTCACACCACCAAGGCGGCTAAGGGCGGATGAACTTCCTCATATTGTCAATGACTTCAGACTCGCTGCAAGG AATGCTATTGACGCTGGTTTTGATGGGGTTGAGATCCATGGGGCTCATGGCTACCTGCTTGACCAATTTCTGAAAGATCA AGTGAATGACCGGACAGATGAATATGGTGGATCCCTTGAGAACCGTTGTCGATTTCCATTGGAAGTTGTTGAAGCTGTGG CGAATGAGGTAGGAGCAGAAAGAGTTGGAATTAGATTATCGCCTTTTGCAGACTATGCAGAATCTGGAGACTCTAGTCCT GACGAATTGGGGCTTTATATGGCTAATGCCCTCAATAAATACAATATTCTGTACTGTCACATGGTAGAGCCGAGAATGAA AACTCTTGGAGAAAAGTTTGAAACCCCTCACAGCCTGGTGCCAATGAGAAAAGCTTTCAATGGAACTTTTATAGTTGCTG GAGGTTATGGACGACAAGATGGGATCAATGCTATAGCTGAAAACAGGGCAGACCTTGTTGTTTATGGTCGTTTGTTCTTA GCCAATCCAGATCTACCAAAGAGATTTGCGCTTGATGCTCCTCTCAACAAGTATAAGCGGGACACTTTCTACGTTTCTGA TCCAGTTGTTGGTTACACCGACTACCCGTTTCTTGAATGA
Protein sequence (LotjaGi2g1v0453400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPNNPLITPYKMGNFNLSHRIVLAPLTRMRSYNNVPQPHATLYYSQRSSQGGLLIAEATGVSDTAQGYPNTPGIWTNE QVEAWKPIVDAVHAKGALFFCQIWHVGRVSSSAFQPNGQAPISSTDKPLAPQDGMQFTPPRRLRADELPHIVNDFRLAAR NAIDAGFDGVEIHGAHGYLLDQFLKDQVNDRTDEYGGSLENRCRFPLEVVEAVANEVGAERVGIRLSPFADYAESGDSSP DELGLYMANALNKYNILYCHMVEPRMKTLGEKFETPHSLVPMRKAFNGTFIVAGGYGRQDGINAIAENRADLVVYGRLFL ANPDLPKRFALDAPLNKYKRDTFYVSDPVVGYTDYPFLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 359 | 358 | 8.3E-140 | ||
| SUPERFAMILY | 4 | 358 | 355 | 1.49E-123 | – | |
| PANTHER | 6 | 359 | 354 | 5.9E-205 | – | |
| PANTHER | 6 | 359 | 354 | 5.9E-205 | – | |
| CDD | 7 | 340 | 334 | 0.0 | – | |
| Pfam | 8 | 334 | 327 | 3.6E-89 | ||
| MobiDBLite | 117 | 131 | 15 | - | – | |
| MobiDBLite | 117 | 140 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0453400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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