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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0459400 |
Transcript ID | LotjaGi2g1v0459400.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Magnesium transporter MRS2-like protein; TAIR: AT3G19640.1 magnesium transporter 4; Swiss-Prot: sp|Q9LJN2|MRS23_ARATH Magnesium transporter MRS2-3; TrEMBL-Plants: tr|I3T7I2|I3T7I2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0459400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95326352..95328482) extracted from Lotus japonicus Gifu genome v1.2.
AACGGGAATGGCAACAACGATGAGAGGTGGGTTCGGAAGAAGGCCACTGGGGTCAGGGCATGGCTCCTTCTTCAAGCAAA CGGCGACACGGAGGTCGTTGAGGCCGGGAAGCACGCTATCATGCGCCGCACTGGTCTTCCTGCACGTGACCTGCGTATCC TGGACCCTCTCCTTTCGTACCCATCCACCGTTCTCGGCAGAGAGAGAGCCATCGTCATCAACTTGGAACACATCAAAGCC ATCATCATCGCTCATGAGGTTCTCCTTCTCAATTCCAGAGACCCCTCCGTCACCCCTTTCGTCGACGAACTCCGCGCCAG GATCCTCCGTCATCGCCACGCTACCACCTCCAACCCTAAACTCGAGATGGACAATCCTGAAGATGGCGGCATGAAGATTC TCCCCTTCGAATTTGTCGCACTCGAGGCTTGCCTTGAGGCTGCTTGCAGTGTCTTAGAAAACGAGGCAAAGACGCTCGAG CAGGAGGCTCATCCCGCTCTCGATAAGCTCACTTCCAAGATCAGTACTCTCAATCTGGAACGCGTTCGTCAAATCAAGAG CCGTTTGGTTGCCATCACTGGTCGTGTTCAAAAGGTAAGGGATGAATTGGAACACTTGCTCGATGATGATGAAGATATGG CCGAGATGTATCTCACCGACAAGCTAGTTCAGCAGCAGTTCGAAACTTCTTCTGCTGAAGAAGATCATGATGGGGACGCC ATGGATAATCTTCTTCAACCAGATATAGATGAGGACGGGACACATCCTGAAATATCATTGGAACCTGGTGGAGCCAATAC AAGTGATGAAGATCATCAAAATGCTCAACACCCTTCTAGTTTACTTAGAAGGGATAGCCGCGCTAGCACTACCTACAGTG CCACCACCAAGCAACTTGATGTGGAGGAGCTTGAGATGCTCTTGGAAGCTTATTTTGTGCAGATTGACGGCACTCTCAAC AAGCTATCTACGGTATGCACTTTTATGACCCTATTTTTGGTAGAATAGTCCAACAAGTTCCTCCAGAAACACAGCTGTTA CACTTTCGAAATTTTGGGATAAAGAAACTTGGACACTAGCCATATCATGTTTTACCTGTCTCGGACATATATGTGTTGGA TACTTGATGGACATTTGTGCTTGTGTTCTGCAATATTTTCTTCATTTTTCTGAACTTTTATATCAATACAAATGAAAATA CCACAATATTTATATAAAGGATATGCTTGAAAGTACTAATGCAACATAGTGACTCATGTTCAAGATATTTTTATACTAAT TTTGCATTGCAGTCTTATAATTTTTAAAGTCCTGTATCTGTGTACTATGTTGCATTAGTACTTTCTAGCTCTCTGATCAA GTAGCCTGATGAAGTTTTATTCATTGGATGCTGGAAGAGTGATCATATTCATGTACAATGTTGGAGGAGAGTGCAAAAAA TGTGCAGTTTTTTCTATTTCCAAGAATTATTGAGAACTCTTTTTTTATTTCTGTTTGGGGTCTTGGACTGTTAAGAATTC ATCTAATATTTCTTGCAAAATATATGGGATTGGAGATACTTTTATTTTCAAATCGTTGGAACAACTTCTTGTATGTTAGA AATGGTCAGAATGTTGGGGTATATGGCTGGGACAGATAAAGATAGAGGAATTACATGAAGGGAGTTGGGCTAGTTTCGTG GTTTGGTAGTTTTAGGTTATGATCTTCTTCAAGCAAAGGATAAAAGACAATTAATATTAGCATTTCTGATCCAATGTCAG TTATCTTCAGTATAGTTTGACATGATGTAATTTATCTGTCCCCTATAAAATGAAATTCTTATTTGTTGCTTGTCTTATTG AAGCTGAGGGAGTACGTTGATGACACGGAGGATTACATCAACATTATGCTGGATGACAAACAGAACCATCTCCTACAAAT GGGAGTCATGTTGACCACAGCAACTCTGGTTGTAAGTGCGTTTGTTGTTGTGGCTGGTATTTTCGGTATGAATATTAAAA TTGAGCTGTTTAATCCCGATATAGCTGGAATGAGAGAGTTCCTCTGGACTGTTGGTGGCAGCACTGCTGGAACCATATTC TTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAGCGCTTGCTGGAGTAA
CDS sequence (LotjaGi2g1v0459400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGCCGCACTGGTCTTCCTGCACGTGACCTGCGTATCCTGGACCCTCTCCTTTCGTACCCATCCACCGTTCTCGGCAG AGAGAGAGCCATCGTCATCAACTTGGAACACATCAAAGCCATCATCATCGCTCATGAGGTTCTCCTTCTCAATTCCAGAG ACCCCTCCGTCACCCCTTTCGTCGACGAACTCCGCGCCAGGATCCTCCGTCATCGCCACGCTACCACCTCCAACCCTAAA CTCGAGATGGACAATCCTGAAGATGGCGGCATGAAGATTCTCCCCTTCGAATTTGTCGCACTCGAGGCTTGCCTTGAGGC TGCTTGCAGTGTCTTAGAAAACGAGGCAAAGACGCTCGAGCAGGAGGCTCATCCCGCTCTCGATAAGCTCACTTCCAAGA TCAGTACTCTCAATCTGGAACGCGTTCGTCAAATCAAGAGCCGTTTGGTTGCCATCACTGGTCGTGTTCAAAAGGTAAGG GATGAATTGGAACACTTGCTCGATGATGATGAAGATATGGCCGAGATGTATCTCACCGACAAGCTAGTTCAGCAGCAGTT CGAAACTTCTTCTGCTGAAGAAGATCATGATGGGGACGCCATGGATAATCTTCTTCAACCAGATATAGATGAGGACGGGA CACATCCTGAATTTACTTAG
Protein sequence (LotjaGi2g1v0459400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIIIAHEVLLLNSRDPSVTPFVDELRARILRHRHATTSNPK LEMDNPEDGGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVR DELEHLLDDDEDMAEMYLTDKLVQQQFETSSAEEDHDGDAMDNLLQPDIDEDGTHPEFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 53 | 53 | 1.5E-8 | – | |
PANTHER | 1 | 211 | 211 | 1.2E-112 | – | |
CDD | 1 | 206 | 206 | 3.22492E-71 | ||
PANTHER | 1 | 211 | 211 | 1.2E-112 | ||
Gene3D | 60 | 207 | 148 | 1.6E-29 | – | |
Coils | 102 | 122 | 21 | - | – | |
MobiDBLite | 187 | 219 | 33 | - | – | |
MobiDBLite | 190 | 219 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0459400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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