Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0027300 |
| Transcript ID | LotjaGi3g1v0027300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding family protein; TAIR: AT5G57010.1 calmodulin-binding family protein; Swiss-Prot: sp|Q058N0|IQM5_ARATH IQ domain-containing protein IQM5; TrEMBL-Plants: tr|A0A151SUC9|A0A151SUC9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0027300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:2959493..2965670) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGATATCGAATCAATGAAAAAAGACACCTTCCAAATTTGCTTTTAAATATACCTGTATTTCTGCAGAATCAGCCACA GCCAGAGTGCCTGATTTAGTGACATTCATAGAACCAGTCCTCTGCTGTCACAGTAGTACTTCTCAGTTCTCACCATTCAT CCTTAAACACAACCCATTATATTAGACTCCTTTAGCACTGCACAGATTTTAGTTTGGTTTTTCATATAGCATGTTTGGTT TCACGCTCTAGAATTCTTAGCTTCTTCTGTATAAAAGTGTCTTGAATTTTATACAAATTGTGAAACCAAACATGCAGTTT TAATCTTCTACTGATAGAAGGAAAATCAAGAATTAGTTAGCAATCCAATAATTGATTGGTTGGTGAATTCCCCATGTCAT TCATGAGTGCTGCCAGATCCCATGTATGGACTACATTCGTGCTTCTGAGGTTTTCTCCTCCACGTCATTTCAGGGTTATT AGAGGTAAATCGAAACTCTCACATTTGCCTCCTGTTTCCATATTTTACTGTGCCTTAATTTGGATAAATATTATAAAATT ATTTATTCTGAATTAGATAAAATACTAAAATCATTTTTAGATTGTTTTCTATTTTTCAAAAATATTATAGGTGTGTTGGA GTAAACAATTTAATTAAGCACTTATGACAATAGGTCAATTTAATTTGATAAGCTCATTGAAATAACCTCACAATAGGTTA TAGGTAGGTGTAGATACTTATTCATAACTTAATCTCAACCGCTTATAAGAATAAGCTCAAAATAGCTTAAGGGTAGGTCA TAAGCTATTTACATAAACATTTATGTTATATAAGATAAACTCTTTTTCTTGAAACTTTTATTTTGAATAGTTGTCTGAAA CTTAAGACTTGTGTAATTATTAGAGAAAATTAAAAAAAAAATCCGAACAAAATGAACCCTTATATTAGGGCAACTATAAT ACGGTGGGAATTGACTTTGGATGATTAAAAATCTAAAATAAGATTATGCAAAGGGGTTTATTATATATAACCAATCAAAA GTTTAGAATGTAGATTAATATTAATAAATTAAATGATATTAAAATTTATGTTAAACTATTTTAATATTAGGCTTAAATAT GTTTATGGTCCCTCTAAAATTAGGGTCTCTTGGTTTAGGCCCTTCCAAATTTTTTTTATATAAACCCCTAAATGCAAAAT AGTACTGAGGTTTTAGCCCCTGTCGTCACCTTATGTCGTTTAGAGGAACTTAAACCAGCGAACCATGGTTTCAGAGGGAC CTAAGACATGATAAATTGAGTTTTAAGTCTCTAAAATCATGGCTCTTTGGTTTAGGTCCTCTAAAATCATGGTTCCTTGG TTTAACTCCCTGTAAAATATGTCATGTCAGTGTCTGCTAGGTAAAGGTAACAGCAGAAACTTATCCCTCCATATTATTTT CAAAATAAGGGTGTATAAAAAAATTAAGTGTTAATATTATGCTAAACTTTTAATTAATTATTGTTCGGCAGGCAATGTTT GGTTTTCCAATTCCAAATATCAACTGACGCTCCAAAGCATGCATGTTAGTAAAGAAGCTCCATATTGTAACTAATATATT AACATGATACTAAATTTTAGTTGCTATTTGTACGGTAACACAATCTTTGCACGTAGTGGAAAGAATAAAAAGAACATTTT AAAAGAAAATTCCACATTTGGGGGTCAAATATATCGATATCCTACTAAAAACCATTTGCCATCCAACTAACAAAAAAGCA GAACAAAATAAAATCTAATTGGTAGTGGATTGGCCTTCCCCTGTTCCTTTAGATCCTTCTATCTATATTCAAATCCTAAT TTGTTAAAATCATGCATGCATGCATGCATCAATGACATTAATAATGGTCTAAAGTTTGCACTTTATAACTTTGGACTGAA TCACTATCTTTCTAATGTCCTCGTGCTCGTGCAGCCTAATCTAGCTTTTCAGCTTTCACATCCTCCTTACACTTTTTGCT TCCAGAAAAGTTACAAAGCCATGCAAATAATCATGTGTCAACTATTTGAAACCTTGAATTCAAACCCCTCGTGTGGCTTC TCCAAGTCGCAAAGTGGTTTTCAATTTTTCTCACCATTCAAAATAACTTAATAATGCCTCTTCTCTTCCAAACTTGTGCA GTATAAAAGAGATGAGAATGTGTCACCCTAAAGCACTAAACTGAGGTGTCTACATGAAACATAAACAAGCTAATTTTGTA CTCCAGGTGAGCTCTGTCTCACCCATCTAAATTCTCTTCAATTTTTCTATTAGTTTGTTTTTGTATGTTTTTAGCCATGG CTATTTGTAGGTATCTCATTTTTCAGTCTTGAAATGTTCAATATGTCCCTTCTGGTTCACGAATATTGGCTTCAACTTAA GAATTAAAAAAAAAAATTGATTTCAAGGTTTTCATACATATCAATTAGTCTAGTGGTTCTCTAAGGCAGAGGAATGAAAA ATAATTAGGATCAATATCCCCTTAAGTTACCATCATTGCTGGAAAATTTAAAGCAGTGTTTCTAATTTTTGCATAGGAAT GAAAATGCTAGCCATAAGCAACGAAGGAGACATCAAAGTGAGCTTCAAGAAAGAAATAAATTTTAGTGATTTCTACAAGC CTGATCAGTTTCGTTATGTTAGTCATGTAGCTGCTGAAGAACCTACCAGCTTGAAGAAAAGGAAAGTGAGAAATCTGAAG CTTCAAACCACTTTCTCTTTCAAATATCTGATTTCAGAAGATTCTATATCAAAAGAGGAGGTGAAAGACTTGATTGACAG ACAAATGTTTTCCCATAAGAGGGTTGTTGCTGCTGCAATAAAGATGCAAAAAGTTTACAGGAGTTACAGGATTAGAAGAA AGCTGGCAGATTGTGCAGTTATTTGCGAGGAGCTATGGTTTGTTCAATATCCAAGTTTATGAGTTGTTTTTCTTTTAATG GCTGTGAAAGTTTATGAGTGGTCTTAAGTTTCTTCTATGGTTCAGGTGGAAGGCTAAAGACTTCACTGCTTCTAATGAGT GCCTTACAACACATGTTGACTCTGATAAATCAAAATCAACTGAGGTACCCTTTAATATTAGAAGTTAGATAATAACATGT TTGGATCAGCTTCTCTTTTCTCAAAATCAATTCTTACATCAGAAGCCACTAATAAGTTTTTCCCCAGAAATGGTTTTGAA TTTAAAATCAATTATAGAAGGATTATCAATTATGCACTATTTGAATTTGATTAAGGAATACTTTTGGTTCAATGTTTGGG CCCATGTGAGTCTTCCTTTGAACCATATTTGTTGACTAAAAGACAATGACTTAACATACTTTGACTAGGACCATAGAGAG GAATTCAAAGTTTTCAATCTCTTTTTCCAACAATTATCTGTGGGGATTTTGTTGAATGTTACTTTTCTTTCTTCACTGTT GGTAGGTGGCTAGAGGTGTGTCCAAAGATGATAAGACACAGAAACTAGCCCTGAGGCAGAAATTAGCTCTGAGACACTGG CTTGAAGCTGTAAGTGTTTACATATTGACAAGTTTTTGTGTTTTAACTTCATTTTTTTAGAGACACCAATTTTTGTTTGG TCACATGTTTTCTTAGAATCCAAGTAATTCAACTGATCGAGGCTATCATTTCCTTATATTTTGCAGATTGATCCCCGCCA TCGATATGGGCACAACCTGCATTTCTACTATGAAGTCTGGTTTGGTAGCCAGAGTTCTCAGCCTTTTTTCTACTGGTAAA CTAATAATAGGAAAAATACTAGCATGTGTTCATGTAGATGCTAATGCTTGAGCCTAAGAGACTTTTTCTTTCTATATTGT CCTCTTAATTGTATTTCTCTGACTTGAAGGCTGGATCTTGGGGATGGCAAAAAAGTAAATCTCGAGATATGCGAAAGAGA GCAATTGCAGAAGCAGCGCATAAAGTACCTTGGCCCTGTAAGTTGTTTCACCACATTGCATTGAGAATGCAATTGATGCA TCAATAATATAGCATATCTTATGGCATTGCCACATATATCACCAAAAGTAGCACGATCTCTTATCATATTCCATCATATA TCACACAATTACTTATCTCTCTGTTTTTTCTTTCTCCAACAAATCACCAAAAGTTTCTTTGTATTTAGAGTTTCAATTAT GTTGCTTGCAATGTGCAGGAGGAGAGGCAACCATATGAAGTGATTGTAAAGGGAGGTAGGCTTGTTTACAGACAAAGCAA GAACCCTGTACACACCAACACTTCTGAGGGATCTAAATGGATTTTTGTTCTCAGCCCATCCCGAATTCTGTATGTTGCGG AGAAGGAAAAAGGCCAATTTCAGCACTCTAGCTTTCTGGCTGGGGGTTCTACAATTGCATCTGGAAGAATGGTGGTCAAC AATGGAGTACTTAATGTATGTTAAATGTTTATACATATGCCAATGGAGTTCTCAGTGGAATTCCATTCTATTAGAAATTT GTAGGAATTTCTCAGCTATAGGAGAGCAAGGATGGAAATAGACTGAAATACATTTCATTTACTCTATTAGTAAGTTGATA TTCATTTGCATCTTATTCAGGTTATATGGCCCTATAGTGGTCATTACCGTCCAACAGTGAAGAATTTCAGGGAGTTCATC TGCTTCTTGGAGGAGCACAATGTTGATATGACAGATGTAAAGGTGAATCTTTTTAATGATATACCAAATTTCAGCCCCCA ATTTAAAATCACCAAGCATAAACTTGTTGGACTTTTCTTGAACATTTTTGTGATTTTACTGTTGCCTCATGCAGAAGCAT CCTGTTGATGATGATGTCCCACCTCCTAGACCAGTTGATGAAGAGCTGCCATTTGAAAACATAGAAGGTAATGGGGTTTC AAGTGACTCAGACACTCCCAATAATCACGGTCAAGAAAATGTGGGTCAGGTTGCTACCAATGTGGAAGCTTCACTTCAAC AGAACAAGCCATTGACATGCAAATGGACTACTGGTGTTGGTCCTAGGATTGGTTATGTGGGAGAGTATCCAAAAGAAATC CAGCTTCAAGCACTTGAACAACTCAATCTACCACCAATGGACAATCATGAAACATCATTTGCAGGAAAAACACCCATTCC CTCTCCAAGGCCTAGTCCAAAATTCTACTTGTCACCTAGGCTTGCCAACTTGGGACTTCCTAGCCCAAGAATATATGCTT TTCCTTTTTAGGACCTCTGGAATTGGGTTTGGATTCTCTCCGCTGACATGACCACCGGAGAGAAATCACAACCATTCAAA ATAGGTTGGGTAAAAAATAAAATATATTTTAGATGGTTGACATCTCTCTAGTAATCATATCACCGGAGAAGATCCTCACC CCTTTGGATAGTATGTGCTTATGCACTGGTTTAGCTTTACAAATTACTTACAGTTGAGCCACTAGTAAAATATATAGGAA CATAAAGGTCAGTTAACCCAACAGTTATTTTTTCATTTGGGTTTTTCATGGCCAATTCTTTGCATCAGTTAGTTTCTGCT GAGGCCTTTTTTCCCTGTCCCCTCAGATGGTTAGTTGCTTGTCCAATAGTTTTTCAGAGGGGGTTGGGGCAATCATCCAT TCTTGTGTTATCAATTTGTCATGTAAGTTAAATAATATTTATAAATACAAATATTCTTTTACCCCCTTCTTCCTCACTAG TTCTTATTGGAGTGGTTTAGATAGTATGCATTTGCGCCCATGCTAAGTAATATTTTATTGCACATACATATAACATGGAT ATCATGACAGAACTCACGCTTTTGAATGTGCTTCTTGGTGCATTTTATACGTTAAACTGGTTAAAGTATAGATTTATAAT GAAAATTTCAACTATCTATATATCATTTCATATTGAGTAGTTGTGAAAACAGATTTCATAATCCACAGGAATGTGACTTC CACAGGAAATATTTAAGTGAGAACTGAGAACAATCAGTAAATAAATAAAGTTTGATAAGAATGTGACTCACTTGATCCTG GTATCTCGACCTCTCTAACAATGTGAGTCATACCAGCCTTGCAACCGAATAACGCAGTAAGCTTAGGTGACTTGGAAGGA TCACCCTTGGGGAATGCCTTCACGGCACAAGTAAAAAATTACACAGTAAAAAAAGCAGAGAAAATGTTGAAGGCCCTTAA TCAAACCTGTTAGAATCC
CDS sequence (LotjaGi3g1v0027300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATTCATGAGTGCTGCCAGATCCCATGTATGGACTACATTCGTGCTTCTGAGGTTTTCTCCTCCACGTCATTTCAG GGTTATTAGAGGAATGAAAATGCTAGCCATAAGCAACGAAGGAGACATCAAAGTGAGCTTCAAGAAAGAAATAAATTTTA GTGATTTCTACAAGCCTGATCAGTTTCGTTATGTTAGTCATGTAGCTGCTGAAGAACCTACCAGCTTGAAGAAAAGGAAA GTGAGAAATCTGAAGCTTCAAACCACTTTCTCTTTCAAATATCTGATTTCAGAAGATTCTATATCAAAAGAGGAGGTGAA AGACTTGATTGACAGACAAATGTTTTCCCATAAGAGGGTTGTTGCTGCTGCAATAAAGATGCAAAAAGTTTACAGGAGTT ACAGGATTAGAAGAAAGCTGGCAGATTGTGCAGTTATTTGCGAGGAGCTATGGTGGAAGGCTAAAGACTTCACTGCTTCT AATGAGTGCCTTACAACACATGTTGACTCTGATAAATCAAAATCAACTGAGGTGGCTAGAGGTGTGTCCAAAGATGATAA GACACAGAAACTAGCCCTGAGGCAGAAATTAGCTCTGAGACACTGGCTTGAAGCTATTGATCCCCGCCATCGATATGGGC ACAACCTGCATTTCTACTATGAAGTCTGGTTTGGTAGCCAGAGTTCTCAGCCTTTTTTCTACTGGCTGGATCTTGGGGAT GGCAAAAAAGTAAATCTCGAGATATGCGAAAGAGAGCAATTGCAGAAGCAGCGCATAAAGTACCTTGGCCCTGAGGAGAG GCAACCATATGAAGTGATTGTAAAGGGAGGTAGGCTTGTTTACAGACAAAGCAAGAACCCTGTACACACCAACACTTCTG AGGGATCTAAATGGATTTTTGTTCTCAGCCCATCCCGAATTCTGTATGTTGCGGAGAAGGAAAAAGGCCAATTTCAGCAC TCTAGCTTTCTGGCTGGGGGTTCTACAATTGCATCTGGAAGAATGGTGGTCAACAATGGAGTACTTAATGTTATATGGCC CTATAGTGGTCATTACCGTCCAACAGTGAAGAATTTCAGGGAGTTCATCTGCTTCTTGGAGGAGCACAATGTTGATATGA CAGATGTAAAGAAGCATCCTGTTGATGATGATGTCCCACCTCCTAGACCAGTTGATGAAGAGCTGCCATTTGAAAACATA GAAGGTAATGGGGTTTCAAGTGACTCAGACACTCCCAATAATCACGGTCAAGAAAATGTGGGTCAGGTTGCTACCAATGT GGAAGCTTCACTTCAACAGAACAAGCCATTGACATGCAAATGGACTACTGGTGTTGGTCCTAGGATTGGTTATGTGGGAG AGTATCCAAAAGAAATCCAGCTTCAAGCACTTGAACAACTCAATCTACCACCAATGGACAATCATGAAACATCATTTGCA GGAAAAACACCCATTCCCTCTCCAAGGCCTAGTCCAAAATTCTACTTGTCACCTAGGCTTGCCAACTTGGGACTTCCTAG CCCAAGAATATATGCTTTTCCTTTTTAG
Protein sequence (LotjaGi3g1v0027300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFMSAARSHVWTTFVLLRFSPPRHFRVIRGMKMLAISNEGDIKVSFKKEINFSDFYKPDQFRYVSHVAAEEPTSLKKRK VRNLKLQTTFSFKYLISEDSISKEEVKDLIDRQMFSHKRVVAAAIKMQKVYRSYRIRRKLADCAVICEELWWKAKDFTAS NECLTTHVDSDKSKSTEVARGVSKDDKTQKLALRQKLALRHWLEAIDPRHRYGHNLHFYYEVWFGSQSSQPFFYWLDLGD GKKVNLEICEREQLQKQRIKYLGPEERQPYEVIVKGGRLVYRQSKNPVHTNTSEGSKWIFVLSPSRILYVAEKEKGQFQH SSFLAGGSTIASGRMVVNNGVLNVIWPYSGHYRPTVKNFREFICFLEEHNVDMTDVKKHPVDDDVPPPRPVDEELPFENI EGNGVSSDSDTPNNHGQENVGQVATNVEASLQQNKPLTCKWTTGVGPRIGYVGEYPKEIQLQALEQLNLPPMDNHETSFA GKTPIPSPRPSPKFYLSPRLANLGLPSPRIYAFPF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 503 | 470 | 1.6E-191 | – | |
| PANTHER | 34 | 503 | 470 | 1.6E-191 | – | |
| ProSiteProfiles | 122 | 149 | 28 | 6.577 | ||
| MobiDBLite | 377 | 419 | 43 | - | – | |
| MobiDBLite | 377 | 396 | 20 | - | – | |
| MobiDBLite | 402 | 419 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0027300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…