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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0032000 |
| Transcript ID | LotjaGi3g1v0032000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF936 family protein; TAIR: AT1G08760.1 GPI-anchored adhesin-like protein, putative (DUF936); Swiss-Prot: sp|Q8KGB6|BIOB_CHLTE Biotin synthase; TrEMBL-Plants: tr|I1MD48|I1MD48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3420217..3425821) extracted from Lotus japonicus Gifu genome v1.2.
GGGTCATATTCCAGAAATTGAATGAGTTGAAACGCATGTGTGTATAGATGCATTTGTCAGACACTGACAGCTCTTTGCGT ATCCATCATGCATGAGAACCTCAAACTCAAACCTGCCGTCAATTACAACCTTCACCCATTTTTCTGTGATCCTTGCTTTT CTTCAGCTCTATCCAACCTCACAGACAATGACACCACCCCTTTAATATTCATCCTAATTTCTACTATATATTATTATTCA ATATTATTATTGTCTGCAAACCTATATATTATTATTCAATATTCATGACCCTTTTCTGAAATTTGCATAAAAAATGTCCA TGATTGTTGATTTCTCCTAAAGTTAAGATTTTGATGTTGGATTCTTCGCTGTGCCACTACCAAACCAGATAATCACAAAG GGTATAGTTCTATGATTGGAAAAAATCAAAAAAATACAAACTATTTTTTTTATTTTGTTGTTTTTGTTATGCATTTAAAT TTTGCTAATTTTGATTAATTCTTTCTAAAAATTGAATCTTTTTGTCATTTTAGGATTGCCCATGATTTAGAATTGCTTGT TAAGAGAAAAAATCAAATTGGGTACGAACAAAATTTCTTGTGTGGAATTTTGGTGAGTGATGCAGAGTGAAGAAGGTGGT TGTGGAAATGGCGAATCTGGTTCCTGGTGTGCTTCTGAAGCTGTTACAGCACATGAATACAGATGTGAAGGTTGGAGGGG AGCATAGATCATCACTGTTGCAAGTTGTGAGCATTGTTCCTGCGCTTGCAGGTGGAGAATTGTTTCCGAATCAAGGGTTT TATCTGAAGGTTTCAGATTCGTCTCATGCTACGTATGTTTCTCTGCCTGATGAAGATGATGATCTTATTTTGAGTGATAA GATTCAGCTGGGGCAGTTTGTGTTTGTGGATCGCGTCGAGGCGGCTTCGCCGGTTCCGATTTTGAGAGGGGTTAGGCCTG TTCCGGGGAGGCATCCTTGTGTAGGAACACCTGAAGATATTGTTGCCACTCATCCACTTGCATTTCTGAATAATGGTGGT GGTTCTTCTGGGGAGAAGGTGAAGGAGAAGGAGAAGGAGAGGAGAGTGAGATCAAATGGGGTTGGTAGTGGTGGTGGTGG TGGTGGTGGTGGTGGTATGGGAGAAGGATCAGAGAAGAAGAGTGGTCTTCTTGGTAGGTTTAAATCACAGGCTCAGCCAA CAAAGCCAGCAGCACTGAAGATTGATGTGAAGAAGGAACCGTTGCCTCGGATGAAGTCTATGAATTCAAGGTCGATTCCT TCGTCGCCGAGTAGTTGCTACTCGTTGCCGACTTCTTTTGAGAAATTTGCCAATGGGGTGAAGCAGCAGCAGGCAAAGGT TAGTGGTAAGAGGGTGGAGAAGGTCACTGCAAATGTGGGAGTGGTGGAGACAGGAAAAGGTGGTTCTTCTGGGAAGAAAA TGGTGGTGGGGAATCCAATCAGAAATTGGATGCAGGGTATTGACCTTGGGGCTAAGGTTCTGCGGAAGAGCTGGGAAGGG AATATGGAGGTCAAGACTAGAGAGTCTCCCAGAGCTAGGGGTGCTGCCAAGGTTGATCCTAAGCCTGAAGTTCGTAGCTC GGTGAGTGTGATATAATTTCATCTTCATTCTTTTGGTTTTAGTGCATGTTTGGAGATCTTTTTTACATTTGATTTTAGAG CCATAATCAATTATAGGGACAAGCTTATGTGAGTAATTTCTGGAGACATGAAGTGATTTTGATAAAAGAGAACCTGATTC AAACATGTTATTAGTTGCAGCTCCTGATGTCAAACACTAAGCCTTGTAGGATATATTGCATCTTTGTTTTGTTCTTTTTT TCTGTCCCTTTCAAATTTCATGTGGAATATGTGCTATGTAGTATAGTTGGTGTTTGTGATACCTGGATTTCATTTCCTTT GACTTTTGATTCAATCAAGCCATTATCTTCCTTACGTTTTATGATCTACCAGACTCCTAGGAGAAGCTTCTCGAATGGGA AGTTGCCATCTAAAGAAGTCCAAGCACCAACAAAGTCTTCCAAGGACGAACATAAGACTCAGATGTCTATAAAGAAGGCT ACTGCTAATGGAACTTTGGAGGAACAAGAAAAGTCAAGTAAACAAAGAACTTCCATTGGAAAGAAATCAGCAGAAGTTGC TAACCACGGACTCCCCGGAAACTTGGTCAAAGTTTCTCTCAATAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTT CACTCCCCTCATCTATTTCAAAGATTGGAAGGGTATATTCATTGAAAAATCCTTGGCTTTTTACACTTAATTTCTTTGAT TCTTGGCTGTCAATTGTCTAAGCATTCATGAATACAAATATAATAAGTATGCTGCAAGTATAATAGTTTTGGATATATGC ATGGATTACACTTTGATGAACATTCTGTGTCCTTGTTCGAGTACAAGCCCTTCAACCAATTGATGCATTGTTCAGAAAAT TATATATGGCTTACTGAATCTTTCTGTTCAAATTATAAATTTTGTAACTGTATTGTTTCATTCTTATTCCATGGTCACCT TTGTGACAGGAAGTTATGAGGCACAGAGATGCGGCACAGATAGCAGCAAATGAGGCTATGCAAGAGGCTGCCGCCGCTGA GAGTTTGCTGCAATGTCTAAGGTATGAAAATATTCAGGAGATTAACTTCATGCAACTAAGTATAGATTATTCTTCTGGAC TGCTCGATTTGTTAGATCAGGTCTTAGTTCTTAGTGTTACTCCACACTGCCGAGATTAACTGTGTATACATGAAAACCTA GATATATTGCTGATAGTTGTACTTCTGAGTGAGTTCTCCATCTACTGAAGCACAACACTTCTAGAGGATAGGGAAAACAT TTCTATACTCGGTTCAGTTAAGATGTAAATCAATAAATCATTCTCAATCAAAAAAATATTCTTGCTACTTTACTATTATC TATCACTTTTACGATATTCTATGTAATCATCAGATGATACAGATAAGAATGTAGAAACTGAGGCATTTGCAGGAATCCTG AACTTCATTACTTATTAGCAATGTTATATACAGGTTTTCTTCACCATTTCGTCCTATTTGAAGCTATTTTCCCTATTTCA TTACCGGTCATGTATTTATTAGTAATAGTCTGTTTTATCATTCCTTGGGTATCTCTTGTCAACAGTTGGATAGATTGTCA TTATAAATTCCTGCCCCTGTATTTCTGATGTTTTTTTTATACTCATACCTGATGAAAGTTATATTTGCATTTTCATTTAT GTGCTTGGAACTGATATAGCATCTTGCAAATCCACTGGCCATACTCATTGTTCTTGAGTACATGTAGTTCATCCAAACTA AGTAGGCTTGGAACGGCACCTGCATGACAAATCCTGGATCTTTGTACTTATTTTGATTAAAATATTTCCTCCATTGTTCT TTGTGTTGAGATTTAAGAAGTCGACTGAAGTCCTAGGGCTACGTTGACTAGAGATATGGCCAAATAAGTCATTGTATAGA GCAATCCTCACCCATGAACTAGCTTTAGGGATAGAGTTAAGCCTAACCTGAATTATATGATGGTGTCATAGCTTATCTTA GATTCGTTTGTTGGAGACTACCCATAATTTCACAATACTACTGAAAATCATTGTAGCTTATGCCATGGTAAGATGCTGAT TGTACAGCAGAATTTTGAATTTCCGGTTTAACCGTCAATGCAGTTAACCCATTTCAATAGACTATTCTATTATGTGGAAA TGTTGTAATTCAATGCCACATACCAAGTTGTACTTGTTGCTAACACTTTTTTGTGATGTTTCTGGCAGTAAGTATTCGGA GTTAACAAATTCTGCGAAGGAAGAGAACCCCCAGCCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTAAACAGTA CCCTGATGATTGCTGAATCATTATCTAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAGGAGCAAATTGGAAGAA GCACTGAAACTAAAATCAGAAAGACAAAAACACGCATCTTCATGGGTCCAAGCAGCATTGGCCACGAATCTTTCATCCTT CGCTGTTTTCACAAGAGAACCTCAATCATCCAAGCTTCCAGCTTCAAGTAATTCTCAAAATCAGAAGACTCTCATGGGAA ATCAGCCCATGTTAGTACTACACAATTCTTCAAGTGAAGATTCTTCATCAAAAGTTCCTGGGAAAACTCGTCAACCACTT TATTCCAAGCACGCCTCACAAGGAGCTACTCGCAAACCTGGTGATGGGTCAGCAAACAGGCACAAGCAGCTAGTCCAACC ACCGCTCCCGGAGTGGGTTAGGGGAAATGGCCTCGATGAGGTGGTTAATTTGGCTGAAATGTTGCAATTACAGTCCCGAG ACTGGTTCGTAGGATTCGTTGAGAGGTTCTTGGACATTGACGGGGACAATACCTTGTCAGATAATGGCCAAATTGCAGGT ATGCTCTCTCAGCTGAAGAGTGTAAATGATTGGTTAGATGAGATAGGGTCGAGCAGGGACGAGGAAGACGAGGGAGAATC ATGCCAGATTCCAGCAGAGACGATTGACCGACTAAGGAAGAAGATATACGAATATCTTCTTACTCATGTTGAGTCTGCTG CTGCTGCACTCAGTGGTGGACCACAATCATCATCAACTCCGATCCAAACAACACAGATTAAAGGCAAAAGGTGAATGAAT GAGTACATAGCTTAGCTTAACAATTGCATAAGTAGGGTAGAGTGGGACTAACCTTGGTCACTCAAAGTTGTCCAAAAATC AAGATCCCCTCAAAAAGATCATTTTTTCCCTCTTTCTAATCTGTTTGTACATAAATCCTACATGGGGTTTGAGGTATAGA TGGTGGAGTGCTAATTATTTATTAGAGGGACAATGGAGATAGCAAATGTGATTTGTGAAGATATTTTCTTTCTTTGATTT TTCTTGATATTGTTCAAATGAAATCATACAAATTAAAACGGTGGAAGATATCAGTAGAAACTTTTCCAATCCTTGCCTTG AATGTGGTTCTTTTATGGCATCATTGTTCTTGTGAGTATCAATCGCAAACAGTATCTAACTGGTGGGGTGCATTAGGACA ATTGACAAATGAACTACTTAAATCTGAATAGGAATAGTTTCTACTGTGTTTCTCAAATCATGTGTGCAGTATTTTATATG TAAAGTTGAGGAAATAAATCCTAAGCCAAATCTTAAATCAATTCAACATCTCATCTTGCATTTTTGTGGTTATTTCACTT GATATCAAAGCTTAGACTCTTTTGAAAAGAAAAAAAAAAAGCTTAGACTCTGGATTAAGCACCTTGACGAGTACCAAAGA GTATATCCATAAAAATATGGTTGAAGCTTAGCTCAAGAAACTCCAACAACATCTATCTATCTTGTTGAAGGTCACTTAGT GATACGTCCTTGAACCTTCAATGAAGAATTTTAATAGACAAGATGATGCTCTTTATTGAGTCCACACACGTTGATATATG TTACATCATATAGTCTACGATTTGTGTGCATATTGAATTATTGATGATAGCAATAATCCTAATATGATATGATAGAAAAA ATAAA
CDS sequence (LotjaGi3g1v0032000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAATCTGGTTCCTGGTGTGCTTCTGAAGCTGTTACAGCACATGAATACAGATGTGAAGGTTGGAGGGGAGCATAG ATCATCACTGTTGCAAGTTGTGAGCATTGTTCCTGCGCTTGCAGGTGGAGAATTGTTTCCGAATCAAGGGTTTTATCTGA AGGTTTCAGATTCGTCTCATGCTACGTATGTTTCTCTGCCTGATGAAGATGATGATCTTATTTTGAGTGATAAGATTCAG CTGGGGCAGTTTGTGTTTGTGGATCGCGTCGAGGCGGCTTCGCCGGTTCCGATTTTGAGAGGGGTTAGGCCTGTTCCGGG GAGGCATCCTTGTGTAGGAACACCTGAAGATATTGTTGCCACTCATCCACTTGCATTTCTGAATAATGGTGGTGGTTCTT CTGGGGAGAAGGTGAAGGAGAAGGAGAAGGAGAGGAGAGTGAGATCAAATGGGGTTGGTAGTGGTGGTGGTGGTGGTGGT GGTGGTGGTATGGGAGAAGGATCAGAGAAGAAGAGTGGTCTTCTTGGTAGGTTTAAATCACAGGCTCAGCCAACAAAGCC AGCAGCACTGAAGATTGATGTGAAGAAGGAACCGTTGCCTCGGATGAAGTCTATGAATTCAAGGTCGATTCCTTCGTCGC CGAGTAGTTGCTACTCGTTGCCGACTTCTTTTGAGAAATTTGCCAATGGGGTGAAGCAGCAGCAGGCAAAGGTTAGTGGT AAGAGGGTGGAGAAGGTCACTGCAAATGTGGGAGTGGTGGAGACAGGAAAAGGTGGTTCTTCTGGGAAGAAAATGGTGGT GGGGAATCCAATCAGAAATTGGATGCAGGGTATTGACCTTGGGGCTAAGGTTCTGCGGAAGAGCTGGGAAGGGAATATGG AGGTCAAGACTAGAGAGTCTCCCAGAGCTAGGGGTGCTGCCAAGGTTGATCCTAAGCCTGAAGTTCGTAGCTCGACTCCT AGGAGAAGCTTCTCGAATGGGAAGTTGCCATCTAAAGAAGTCCAAGCACCAACAAAGTCTTCCAAGGACGAACATAAGAC TCAGATGTCTATAAAGAAGGCTACTGCTAATGGAACTTTGGAGGAACAAGAAAAGTCAAGTAAACAAAGAACTTCCATTG GAAAGAAATCAGCAGAAGTTGCTAACCACGGACTCCCCGGAAACTTGGTCAAAGTTTCTCTCAATAGTAGAAAAGTGACA GATGCAAGTGTTCAATGGGCTTCACTCCCCTCATCTATTTCAAAGATTGGAAGGGAAGTTATGAGGCACAGAGATGCGGC ACAGATAGCAGCAAATGAGGCTATGCAAGAGGCTGCCGCCGCTGAGAGTTTGCTGCAATGTCTAAGTAAGTATTCGGAGT TAACAAATTCTGCGAAGGAAGAGAACCCCCAGCCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTAAACAGTACC CTGATGATTGCTGAATCATTATCTAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAGGAGCAAATTGGAAGAAGC ACTGAAACTAAAATCAGAAAGACAAAAACACGCATCTTCATGGGTCCAAGCAGCATTGGCCACGAATCTTTCATCCTTCG CTGTTTTCACAAGAGAACCTCAATCATCCAAGCTTCCAGCTTCAAGTAATTCTCAAAATCAGAAGACTCTCATGGGAAAT CAGCCCATGTTAGTACTACACAATTCTTCAAGTGAAGATTCTTCATCAAAAGTTCCTGGGAAAACTCGTCAACCACTTTA TTCCAAGCACGCCTCACAAGGAGCTACTCGCAAACCTGGTGATGGGTCAGCAAACAGGCACAAGCAGCTAGTCCAACCAC CGCTCCCGGAGTGGGTTAGGGGAAATGGCCTCGATGAGGTGGTTAATTTGGCTGAAATGTTGCAATTACAGTCCCGAGAC TGGTTCGTAGGATTCGTTGAGAGGTTCTTGGACATTGACGGGGACAATACCTTGTCAGATAATGGCCAAATTGCAGGTAT GCTCTCTCAGCTGAAGAGTGTAAATGATTGGTTAGATGAGATAGGGTCGAGCAGGGACGAGGAAGACGAGGGAGAATCAT GCCAGATTCCAGCAGAGACGATTGACCGACTAAGGAAGAAGATATACGAATATCTTCTTACTCATGTTGAGTCTGCTGCT GCTGCACTCAGTGGTGGACCACAATCATCATCAACTCCGATCCAAACAACACAGATTAAAGGCAAAAGGTGA
Protein sequence (LotjaGi3g1v0032000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEDDDLILSDKIQ LGQFVFVDRVEAASPVPILRGVRPVPGRHPCVGTPEDIVATHPLAFLNNGGGSSGEKVKEKEKERRVRSNGVGSGGGGGG GGGMGEGSEKKSGLLGRFKSQAQPTKPAALKIDVKKEPLPRMKSMNSRSIPSSPSSCYSLPTSFEKFANGVKQQQAKVSG KRVEKVTANVGVVETGKGGSSGKKMVVGNPIRNWMQGIDLGAKVLRKSWEGNMEVKTRESPRARGAAKVDPKPEVRSSTP RRSFSNGKLPSKEVQAPTKSSKDEHKTQMSIKKATANGTLEEQEKSSKQRTSIGKKSAEVANHGLPGNLVKVSLNSRKVT DASVQWASLPSSISKIGREVMRHRDAAQIAANEAMQEAAAAESLLQCLSKYSELTNSAKEENPQPAVEQFLTLHASLNST LMIAESLSKPIPDGSSPDYERSKLEEALKLKSERQKHASSWVQAALATNLSSFAVFTREPQSSKLPASSNSQNQKTLMGN QPMLVLHNSSSEDSSSKVPGKTRQPLYSKHASQGATRKPGDGSANRHKQLVQPPLPEWVRGNGLDEVVNLAEMLQLQSRD WFVGFVERFLDIDGDNTLSDNGQIAGMLSQLKSVNDWLDEIGSSRDEEDEGESCQIPAETIDRLRKKIYEYLLTHVESAA AALSGGPQSSSTPIQTTQIKGKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 733 | 733 | 0.0 | ||
| PANTHER | 1 | 733 | 733 | 0.0 | – | |
| Pfam | 4 | 723 | 720 | 3.0E-232 | ||
| MobiDBLite | 126 | 172 | 47 | - | – | |
| MobiDBLite | 135 | 149 | 15 | - | – | |
| MobiDBLite | 293 | 380 | 88 | - | – | |
| MobiDBLite | 293 | 317 | 25 | - | – | |
| MobiDBLite | 318 | 336 | 19 | - | – | |
| Coils | 424 | 444 | 21 | - | – | |
| MobiDBLite | 566 | 616 | 51 | - | – | |
| MobiDBLite | 566 | 591 | 26 | - | – | |
| MobiDBLite | 722 | 743 | 22 | - | – | |
| MobiDBLite | 723 | 743 | 21 | - | – | |
| Coils | 739 | 743 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0032000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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