Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0032300 |
Transcript ID | LotjaGi3g1v0032300.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | BZIP transcription factor; TAIR: AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q04088|POF21_ARATH Probable transcription factor PosF21; TrEMBL-Plants: tr|A0A0B2RDZ7|A0A0B2RDZ7_GLYSO Putative transcription factor PosF21; Found in the gene: LotjaGi3g1v0032300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3444855..3452252) extracted from Lotus japonicus Gifu genome v1.2.
GAAAACTAAAATTTTGGTTGAATCCCTGGGTTATTTTATTCTCTGTCGAGAATGTTCATGGTAAATTGTCAACTATATGT GTGTGTCTCTCTCTCGTGATGGGTTACGTGCCAGAGGAATTGAACCCACCGTCACGCTCACTCCATTATTACCTGTAAAA ATTTATAATAAGAACCTGTGCTGTGTTGTGTTTGGTTCATTATTAGTTTACATGACCACGTGAATCCAGTGAAAGAGAAC AAATACTGTTGCACCATGTGATGTGACATGTGAGCTTGAACATCAAGTTTTTCAACGTTTGACCACTTACCCAGTGTATT GTTTGAAAAAAGGGGAGTGGTAGATGTTATGGCAATAAGTTATTGGGTTTTGTCTGATTCTTTAATGGTTTTATGAATAT GTATTGAAAGTATCAATTACAAAATTAAATGAAAAAAAAAAAAAAATTAGGCTTAAATATGTTCAAGCTTTAACTTTTAA AGAGAACCCTAAATTGGTTTTTATGAGAATAAACATTATAATTGGACCTTAAAAAAGAAGTTCAAATAGTCTAAATGATA TCTCTTCTTACGTGTCATTATTTTTTCATTCAACTGTCTTTAGATCAATCTAGCCGGATTAGGGATGAATACGCAGAGTG TGAATATATATCACTTTCAGTCTCTCCACTATGAGTACCATAAATAATATCAGGTAAAATAAGCTTAATTCTATTTTTAT AACTTTTGTAATAATCTTAAAATGTAAATTGCATAAATTAAGCTAATGGGCCTAAAATGACTAGCATGTAAAAGCTTTTT GATCTTAGGGATTAAAACCAACAGGGTTTGATTAATCATACCTGGGGAGATACTCCATTGCAGCACTTCTAAAATTAAAA AAAAAACATCATCATCAATTATGTACCAGAGCTTTTGATATAATAAAGTCAAGCCATCAGACCATCCAACCTGAAGCTTT TGTGAGTGCATCTCGAAAAGAGTATCACACATATCCTCCTTAGTGAATGACATATTGATGATCTTTCTATGACCCTTAGT GATCCTGTAATCCTGTTAGTCGCAAGAGATGTAACTTCAACAATATTAACAGGGTTATAAGAGGAAAATAAATTCATAAA ATAATCAATTACAAGCAGTATCTCTATTGTCCTCCACCTCTCTTCCCCTGTCATCTGCAAGCTTTTTGATCATGTTACGC TTACACATTTGAGAGGCTTTTGAATGGAGAAACCTAGTGTTTTTATCCCTATGCTATAGCCAAGAGGCCCAAGAGCGTTG GCTCCACATGATCAAGCAACAAATCAAGAGTTCTTTCCACTTCTGTCATTCAAGTACTTGTTCAGTTTGGGTCCTTCACT GAAGTTCTTGCAAGCTTACCTTGTTATTAATTAGCAATCTTTTATGGGATATCCTCAAATTTTTCTCGCACCCAACTACC AAGGGATTCGCCAACACATCCCAATTTTGATAAGCGATTAGAACCTTTGTGACACCAAGATTCCACCTCCACCTCAAGCT CGAAGCTATACTTCCTCAAACCTAAACAACAGGCTCTACACGGTTAATTCGTTCATTTTCTTGGTAAGTCTACACGATAA AATAATGAGATTATGATCATAATGTTACCTAGGGAGATGTGCAACCGCCGTGACCAGCCAAAGTTCAAGTCATTTATCAA CGCATAATCCATCATCTCGTCAATGGTGTCCAGAGCTTTCCTCCTATTAGACCAGGTAAACCTGTAGCCTATACAGTGAA ATAGTACATGGAATTTTTTCAATGTCTTCTCTAAGACATCAAAAGACAAAAATATATGACCCGTAACTTAAAAGTATATG TATAGATTTTTTTTTTAAATGACTAATAACACTTTTAAAAATGACACTAATTTTATATGAAAACCTATATGGAAGGAGCT CCCAACTATATATGAAACCAAAATTATTATGTGTAGTAGCACTATTTTTTTAAGCATTGTAAATTTTTCAATGCATTGTA GAAGCACTACTAAAATCACATGTTGCCATAAAATGAGGACTAAAAATTGAAAAAAATGAGGACAAATTATCGGAGGCTAT GTAATAAATACCTGTTTGTAACAAACAATCTTATTCAAATGTCTGAATTCTGAAAGGAAGGGAATAAGAATATCATATTC TATTTCCTTCCTTTCTTTCTTTCTTTTTCTTTTCTTTTCCTTTTTCTGCACTTCTTCATAAAAATTATTAATTAATCAAA TCTTATTTTTTCACAGAAAGAGAAAGAATGAGAGAAAGGTAAAAGAAGAAGAAGAGTACCTATCATCTCAATTTTGATAT CATTCATTCATTCATGTCTTGACTTCAAATCTTCCTTCATAATTCTCCAGATCTCTCTCTTTCTCTTTCTCTCCCAGACA ACAATTTCCATTTCAACCAAACATTCATTCATTTTCATTCAATTTCCCCTTTCATTGACTTTCTCCATTGAATTAGGGTT CCTATTCCCCTTCTCCGATCTTCAATGATCTACGCGTAAATCAAGGTACCCTTCTTCATTTTTCATCTTTACAGTGCTTT CTTCTCTTTTCCCAATAAGAAATTTGAAAACTTTCTTATTTTCATGTTCAAAGTTTCAATTTTTTCCATTTCTACAATGA GATGTAACTAGGGTTTTGCACTGATTGGACTAGGTTAGCTCTGAAATTGCGTAAAGATTGTGTCTTTCTTTGGTGGGGGG ATTAAGGAATGGATAAGGACAAATCTGTGGGTCATGGCGGTGGTTTGCCACCTCCGCCAGGTCGTTATTCCGGTTACTCA CCCCCCGGAACCGCCTTCAATGTGAAATCTGAACCACCGGCGGGAACGTCGTCGTATCCGCAACTGGTTCCGGGTACCAG CTCAGACGTGAATACTCATTTTGGACATGGAATGTCCACCGGTGCGGCGGATTCGAGTGGATTTAGCCATGATATTAGCA GAATGCCGGATAATCCTCCGAGGAATCGAGGTCACAGGCGTGCTCATTCGGAGATTCTCACTCTGCCTGATGATATTAGC TTTGACAGTGACCTTGGTGTGGTTGGTGGTGCTGATGGGCCCTCTTTCTCGGATGACACTGAGGAGGACTTGCTATCCAT GTACCTTGATATGGATAAATTCAACTCGTCGTCCGCTACATCGTCGTTTCAAATGGGTGAGCCGTCTAATGCGGGAGGGC CGTCAGGTTCGATGCCAGGGCAAGGCTTTTCTGCACAGAACATTGCTGTTGGTGGTAGTGAAAGGAGAGTTAGGCACCAG CATAGCCAGTCCATGGATGGGTCAACTTCCATTAAACCTGAGATGCTAGTGTCGGGTTCGGATGAGATGTCTGGAGTTGA CTCCAAGAAAGCTATGTCGGCTGCCAAGCTTGCAGAACTTGCCTTGATTGACCCCAAGCGCGCAAAAAGGTATGGTTTCT GAACGAGTCCTTTTTGTTTTGTCGTTATCCTTTCCGGTGTGTCTCCACGATGTTTTCTTCCGAATGTTTTATTATGCTGT GTGATATTTTGGTGCATATTTTTTTTACGTACATTAGGTATTATATCATTTATAACTTATAAACATGATGTTTAGTGCAC ATACTCAAATCCATAGATGTTACCTCATTTGGGTTTTAGGACATTCTGTATGAAATTTTTTTTCTCAGAAGTTGGATTGT AGATTAATTTGAGAAGATCTAATTATATAGGAAAGTGATTCCCTGATGAAATTGAGCTGCAAGAAACACAATGCTAGGCA TGATCGAAATTGAGCTGCAAGAAAGAACACTGTATTGTATAATGTTTTTAACTAGTATATTGTATATTGCTAGGTTTTGT AACCCTTTGTGAATTGTGACTAATATTTATGTGCATTTTACTTTGATACCTGGTAAGTTTATGATTTATGACTTTTCTTT GTTGGTAACATTATAGAAATAGTTGAGGCTGGCATTGACTAAACTCTATATGTTAAAGATAATTGTGAAAGATTAGGAGG CTTAAAATTACAATTTTCTTAAGGCCTACTGGAAGGAAAATGTTGATGTCCTGTTGGCCATAGTTCTAATTTGCTATACT TATACATTAACATTATGTTGGTAGTACTGAAATAGTGTTAGGCCCCGTTTGGAAGAGCTTATTTGAGCTTATCTGATAGC ATAAGCTATTATGCCAGTGTTTGGGAGAGCTTATGCAAACAGCTCATGGCCTACCATAAGCTGTTTTGAGCTTATTTTCA TAAGCTATTTAGGATAGCTTATGAAAAAGAGCTTATGCTTATATATAGCTTATTTTCAATTTATTTCAATAAATATTTTA AAATAGCTTATGGATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTGTTTCCAAACGGGGCCTTAGTAATTTTGTT AAATATTGTTTTGGCCTTCTGGTCATGGCTACTTGGCTAGTCAGTAGGGACTGTCCTATTCCGAAATGCCTCGTTATCAG CGATTTTGATCCACTGCCTGCATTGCAGGGGGCATTGGGGAAATATTGCTGAAGCACAATGCCCCTGGTCCTGCCCCACC CCCATATGGGCAGTCTATCCATATTTATATTGCTGCAAAATGCAAATTAACATTTCAGCCTCTCTGTATTTGACTTCCTG TGGGACCTATTTTGCTTTATCTCCGACACTTTAAAGGCGGAGAGTGCGTGAACTATTTTTGTTTTGTTTTCTGTCTTTTT CTTTCACACACGCACGCGTGCGCACAAATTTATTAATTAATTTATTTTGGGAGAAAAACTTTCCACAATGATAACCTCTG CTTTTAATTGTGTATCACAGGATATGGGCCAACAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGTTACATAGC TGAACTTGAACGGAAGGTGCAGACATTGCAGACAGAAGCAACGTCTTTGTCTGCACAATTAACTCTCTTGCAGGTATTAA CTTTTGTGTCTGTTGTTTAGACATTCTATGGTGTACTACTACTGCATCATACAACATTCTCATGGTACATTTTGGTTTGT TATAAGCAGCGGGATACAACCGGACTTAATTCTGAAAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGT TCACTTGCAAGATGGTAAGCTCATGCTCTTATAAATGTTTCTGAGGCTAATGCTATATTGTTTTCCTTATAATCCCATCT TTGAAAAAAATCTTTATTAGAAGACCATTTTAAGCCTTATGATCTATGTATGCAGTATCTTGTTTGCACCTTACATTATG ATATGACTTTAGTTAGCTTTCCCAATGGATTAATACATATAACTCTTAGATGAAACCATGAAGGCGTATGTTCAGTTTAA AGCTGGCTACTAAATTTTTTGTTGTTGGGTTGGTTATAGGTGAAACATGCTCTCTTGCCTGAAATTTGAGTTTCATATTT TGTTTTAAATATATGTTTAAGCACATGGAAGGTGTCCATTTTATATTGGTCTTGGTTCTTCAAATATCATGAGAATTAAT TCATTTTTTGTCCTTCTAGCATTAAACGATGCGTTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGGCAAGCTAT GCCACCTAATGGAGGAGGACCTATGATGAACTATGCTTCTTTTGGAGGGGGCCAGCAGTTCTATCCCAATAATCACAGCA TGCACACTCTTTTAGCTGCTCAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCACCAGCAGCACCAGCATCAATTT CAGCAACAAATTCAACAGCAACAGCAACAGCAGCAGCAACAAATACAACAGCAACAGCAACAGATGCAGCAGCAGCAGCA GGAACAACATCAACAATCAGGGGACTTGAAAATGAGATCAGCTACATCTTCTCCTTCCCCCAAAGATAACGATTCACCAG ATCTAAATCCTTCTACGGCCAAGGATTGTTGAGTCTGCACATTATGATCTTATTGCTTTTAAATCCTTTTGTCTCGCGTC CTAGTGTCTGTAGGTTCCAGCCTTGTTTTATTTATTTATTCTTAAACAATAGAAATGGTCCCTAGTTAGAGATTGGGAAT AATGCTTTGCATCTTTGCTATGTATAATTCTAAAATCATTTGGCACCTTAGTTAATTGACTATGGATATAGGGGGGTTAG GTTTATGTTTGTTAAGTCTGACTTAGTTGCTTTTTACCCTCAACTTTATGTTCTTGAGATACTTGGTACTTGACTTCCTT GGCAATTTTTGTATCTGAGCCTTTCTCATAGACTGGCACTTCACCACAAGCACGGCTGATGTGATCTTCGAATGCTTTAT TTGAAGCTCCATTTGCGGTCTCCCTTTAGGGTGTATATGTGAGTTGGGTTTTGGAGGGGAGGGGAATGAAGGGAAGGGGG GGAGGCTTATGAGAAGTTTCCCCATTGTCTGAGAGATTTTAAAAAGGGGGAAGGATTAGGGGTATTTCTAAAAACCCTCC AAGATTCCTCCAAAACCCTTAGTTAATTTGTTTAATCTGTCAAATTGGAGGGCTTTGGACTATCAAACAAGGGCTTTCCC AATTAGTTACAAGAGGTCACATCGGTGAGTTCTACTTCATTTTGGGAAGCTTCTAACTGATTTGTTACTTGAGTTGTAAC AGAAACAAGTAAATGGAATCATACTGGTATGTTGCACAAGGCTTGACGCAAGGTTATGTGATAAGCTTCTGTTGGTTTGA TTTTGTAGTTGTTAATGTTTTTACTTGGTGATTATAGTCTTCAAGGGGGTGTAAGTAGGTTTGAACTTACTCTTGAACCT GGTCCAACCAACTAAGATTTGTTAGCTGGACTCAAGTCAGTTGATTGTTGTTGAGCAAGACATATGGTCAGTATATTAGT TTGGTGAAGAAACCTGATAATCATCTAGGGAAACCTGAACCAAACCAACTTAGGAGAGCACTAGCTATTTTTATTATTTT CCTCTATGTCTTAATCAAGATTAATTCGTTTCTCTTTCACCTGGTGTCCTATAGCATGTTTGTTTTGCCATCCATATTTC ATTTTGCAACATTTCAATGTATGGGGAATCAGAAATCACAGTTTCAAACATGCCTTACGTCAAAGCAAGAAAGTAGTCCC GTTCCCGTTGGTTGAAAGTTGGAACGAAGTACGAAGGGTTAGAAGGGAAGTCATGTAGGAGTCAGTAAAATAATCTTTCC TGCGGTGAGAATTTTCTTATTACTCATGTAGTAATAATACTCCATCTTAAATCACAACTTCACAAGACCTTATATTTTTT TAAAACTCACAAGACCTTATATTTATAGTAAATTATTTCGAGTTTTAAATGTTTTTTAAAAATGATAATTATGTACCGCA GGACTGGAGTGCTGAAAATTGTTGGATTTAGTTATGAG
CDS sequence (LotjaGi3g1v0032300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAGGACAAATCTGTGGGTCATGGCGGTGGTTTGCCACCTCCGCCAGGTCGTTATTCCGGTTACTCACCCCCCGG AACCGCCTTCAATGTGAAATCTGAACCACCGGCGGGAACGTCGTCGTATCCGCAACTGGTTCCGGGTACCAGCTCAGACG TGAATACTCATTTTGGACATGGAATGTCCACCGGTGCGGCGGATTCGAGTGGATTTAGCCATGATATTAGCAGAATGCCG GATAATCCTCCGAGGAATCGAGGTCACAGGCGTGCTCATTCGGAGATTCTCACTCTGCCTGATGATATTAGCTTTGACAG TGACCTTGGTGTGGTTGGTGGTGCTGATGGGCCCTCTTTCTCGGATGACACTGAGGAGGACTTGCTATCCATGTACCTTG ATATGGATAAATTCAACTCGTCGTCCGCTACATCGTCGTTTCAAATGGGTGAGCCGTCTAATGCGGGAGGGCCGTCAGGT TCGATGCCAGGGCAAGGCTTTTCTGCACAGAACATTGCTGTTGGTGGTAGTGAAAGGAGAGTTAGGCACCAGCATAGCCA GTCCATGGATGGGTCAACTTCCATTAAACCTGAGATGCTAGTGTCGGGTTCGGATGAGATGTCTGGAGTTGACTCCAAGA AAGCTATGTCGGCTGCCAAGCTTGCAGAACTTGCCTTGATTGACCCCAAGCGCGCAAAAAGGATATGGGCCAACAGGCAG TCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGTTACATAGCTGAACTTGAACGGAAGGTGCAGACATTGCAGACAGAAGC AACGTCTTTGTCTGCACAATTAACTCTCTTGCAGCGGGATACAACCGGACTTAATTCTGAAAACAGTGAGCTGAAGCTGC GGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGATGCGTTAAAAGAGGAAATTCAGCATTTGAAA ATACTGACTGGGCAAGCTATGCCACCTAATGGAGGAGGACCTATGATGAACTATGCTTCTTTTGGAGGGGGCCAGCAGTT CTATCCCAATAATCACAGCATGCACACTCTTTTAGCTGCTCAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCACC AGCAGCACCAGCATCAATTTCAGCAACAAATTCAACAGCAACAGCAACAGCAGCAGCAACAAATACAACAGCAACAGCAA CAGATGCAGCAGCAGCAGCAGGAACAACATCAACAATCAGGGGACTTGAAAATGAGATCAGCTACATCTTCTCCTTCCCC CAAAGATAACGATTCACCAGATCTAAATCCTTCTACGGCCAAGGATTGTTGA
Protein sequence (LotjaGi3g1v0032300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKDKSVGHGGGLPPPPGRYSGYSPPGTAFNVKSEPPAGTSSYPQLVPGTSSDVNTHFGHGMSTGAADSSGFSHDISRMP DNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSSFQMGEPSNAGGPSG SMPGQGFSAQNIAVGGSERRVRHQHSQSMDGSTSIKPEMLVSGSDEMSGVDSKKAMSAAKLAELALIDPKRAKRIWANRQ SAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTTGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLK ILTGQAMPPNGGGPMMNYASFGGGQQFYPNNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQQIQQQQQQQQQQIQQQQQ QMQQQQQEQHQQSGDLKMRSATSSPSPKDNDSPDLNPSTAKDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 409 | 409 | 1.9E-176 | – | |
MobiDBLite | 1 | 98 | 98 | - | – | |
PANTHER | 1 | 409 | 409 | 1.9E-176 | – | |
MobiDBLite | 34 | 71 | 38 | - | – | |
MobiDBLite | 80 | 97 | 18 | - | – | |
MobiDBLite | 141 | 172 | 32 | - | – | |
MobiDBLite | 141 | 197 | 57 | - | – | |
SMART | 226 | 290 | 65 | 1.1E-15 | ||
ProSiteProfiles | 228 | 291 | 64 | 10.944 | ||
Pfam | 230 | 288 | 59 | 4.2E-9 | ||
SUPERFAMILY | 230 | 282 | 53 | 5.44E-11 | – | |
Gene3D | 230 | 282 | 53 | 9.1E-12 | – | |
CDD | 231 | 280 | 50 | 9.22072E-27 | – | |
Coils | 246 | 315 | 70 | - | – | |
Coils | 381 | 415 | 35 | - | – | |
MobiDBLite | 396 | 443 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0032300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…