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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0032700 |
| Transcript ID | LotjaGi3g1v0032700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ENHANCED DISEASE RESISTANCE 2-like; TAIR: AT1G06050.1 ENHANCED DISEASE RESISTANCE-like protein (DUF1336); Swiss-Prot: sp|Q8VZF6|EDR2L_ARATH Protein ENHANCED DISEASE RESISTANCE 2-like; TrEMBL-Plants: tr|K7M989|K7M989_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:3468549..3472343) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAGAGAAAACCGAAAGAAAGAAAGAACACAAAGGTGTCTTTGAAGATCACGAAAACAAAACCCTGAATCCATCATCA AAGAGTGCTCGTGCTCGCTCGCAATTGCAGAGAAATCCAAACCTCCGATTCCTAACAATTGAGCTGGTTAGCGTTTAACT TCTCCTTCTCTTCACCTCACCTTGCGTTGTTACTTCATAGATTTCTGTCAACTGTGCCTATTATTCTGAATTCTGATTCA TAGTTATAGATGAATGATGCATATACATGTCCCTTCATGATCTTGCAATGGTTTAAGCTTACCACAATGATCTGTGTTGT TTTCACAATTGATTTTTATCTTCCCCAGCATTTCTTCACTTGTTTAACCAGTAATCACCCAATTATTTATTTCTGTATAT TATTATATGGAATAGGTTTTACTGTAAAAATTGTTACTGTGCTGCTCTTCCATATGGACTTCCTAAAATTCAATTCTTTC CAAATTGATTTATCCATCATATAGTAGCCAAATTCAACTTATCATTACTGTACCAACTATAGTAGTGTAGTATTATCAAG TCATTATGATATTATTCTCTATTAATGTATATGACCTTCTACATTTAAGTAGGCAAGTAAACACTGTTGTTAAATAGCGT AGCGCTCTTAGGGCTCACCGCTATTTTTCGCTTTGAGGGCTTGGTATAGTGGATTTTTGGCTTTCCGCCATTGTCCACGA TCCGCCATTAACAACACTACAAGTAAATGATGCCAATGTAGTTGATCTGTATGCGAGTGTTTACAAAGTTTGAAAGACAT GAACATGATCATCAATCTCATCTGTTTAGTAATTTTAATTTTTAATACCCTTTTCCATCAATGAAACCTAAAGACAATCA AAGCCTACTTTGATTTCTTTTGCTGGTCATGTTTGCCTATGAAGGATAAGCTTCTTCTTTTTTCTTTTTTTTTTGTGGGG GGAAGGGGTGCAAACCAGGCTAAGCTTATGTTAGTTACATATTTGTCTATTTCAAGTTTCATTCCCGGTTTAGGATGTAT ATTTCTTTCTTTTTTATTAGTATCTGTGAAATCTTGTACATGTTTGGAATTTAGATGACCTTATAACTCATGTATGTGGG ATTCTTTTTTGTCTTTTAATCAAAGTATTATTTATTCTCAGCACTTCAAAGCTTATATTGTTATTACTGGGAAGCAGGGC ATATTATGGCCAGCCTTGGTGATAGAAAGGAAGCTGAATGGATGGAAAGGATACTATCTGAAGGAGCCGTTCCACTTCTT GAGCCGGATAATTGTTCAAAAGGTTGGGCTTCCCCTCCAGGAGATGCATTCATGGTTAGAGGTCCTGAGTATTTTACAAC AAGGGTTAAGATTCCTGCCGGTGATTATCTACTCAAGCCTATTGGTTTTGATTGGATTAGAAGTTCGGTGAAAATCGGGG AGATATTAAATGATCCAAATAGTCGAGTTAGGAAGGTCATTGATAATGAGTTTCCAGCAGGTGATAAACCCTTTATATGG GCCTTCAATATTCAAGTCCCAACCAAGGATCATTATAGTGCCATTGCATATTTTACAACCAAAGAGCCTATTGCTGAAGG GTCGCTAATGGATAGGTTCTTGAAAGGTGATGATGCATTCAGAAACTCAAGACTTAAGTTGATTGCCAACATTGTAAAAG GTCCTTGGATTGTTAGAAAAGCTGTTGGAGAGCAGGCTATTTGCGTAATCGGCCGTGCCCTTTCCTGTAAATATTCCGTT ACAGAGAATTTCATAGAAGTAGATATTGATATAGGGTCTTCTATGGTTGCAAGTGCAATAGTTCATTTGGCGTTCGGTTA TATCTCATGTTTGACGGTTGATTTGGCTTTTCTTATTGAGAGCCAAGCTGAATTAGAGCTTCCAGAAAAACTTTTAGGTG CTTTCAGATTTTCTGACCTCGATCCTGCTTCAGCTAAAACAATCGAGCCATCGTCTGTCGAGAGTTCGGAAGGTTTACAG ACATCTTTACCTACTAGGTGGTGGCAGTCTATTGGGCAGGGGTTTTCCCACATTCTTCATTCAGGTCCTCAAGAAGATGG CTCTACTTCTGGATCACAACATGCTAATATTTTAGATAAAAAAGATAGTCAGACTGATGTCAAGCAATGGTAAGTTTATG CAGTTTAATAACCATTTGGTAACATGATTACAGATGCTTTGGAGATGTAAGTTTGCTATTGAAATATTCTGCATGTTTAA AACTTATTTTTCTCAACTGCTCAAAGACGTTTTTCTTCTCTTTTTTGTTTCCCTTTACCAAGGGACATGATTGGGAAGTG GTCATTGTGATCATATATGTAAGATCACAGGTTTAATTATCTGCGTATATTTTTAGCATCTATTATGAACCCGATTGGAT GTGGATCAAAAGAGTATTTGAGTTTATCTACTAAAAAATGCACTAAATTGCTCTTTGGTTAGCATCTAAACAGGCCCTGT CTTCTTTGCAGCAATTAATAGTACAAGTGTACAACTAGTTTTTAAACATGTGTCCTGCAATTTTTGGATTGAAAATTGCC TGCTTTGTGAAGGGATTAACAGAATGGACAGGGAAGAAATATGACCAATTCGGATTCCAGTTTGCCTATTTGCTTGTAAC CTAGTAGTGTTAGGATATTTCATTGCAACACACACACACACAAAACTTCCACTTTATGTATGTTGGCTGATTGAGCATTT TTAGTTTCTTACTGATTTTGATTGTCATTACTACATGTATTGTTATTTGTTACAGCATCCTCTGTCTTTTCTATTCTTTT TTATTCCATCTGTGACTTAAAAGCTACATCATGTCAAAAAAACCTTAGGTATAATAAGTTGTAATCGACTCACACATAAA ACAGGTTCCCTCTTCCCATATATGAATATTAGGCCTTATATTTCTAGTGAAGTTATTTTCCTTTTGTTTTTTGTATTTCC TCCATGTTTTGATCCTTTTGTATTTTCTGTACCATGTTATCATTTGCAGATATACTGGAGGAATTGCAGGAATTGCAAAG GGTATGAAGTTCCATTTTAGGTGATTATTCTTTTAGCCTTTTGGGGTGTACAACTGAATTCTTGCCCTATGGTAGTATTT TGTATCACTTCAGAAAGTTAGAACTTAGAATGCCCTCATATTTATAGTTGAAAAATAGTCCGTAGCTGAAAATTAAATTC ATGACTTTTTTCTTGTCTAGGGTACTTTTTGTGCTTATCCAAATTACAATTGCTTCAATTTTTTGGTTGGATTGATGTTA TGAATTTGTTCTCCTTTAGTAACTTGTCTAGTAGATTTAATACTTTCAAATAGACGAATATTCTTACAATGTTTATGCTG ATAAGGTATAACTCACAATGGATTGAGCATCTTCTAGACAACAACTATCCAATATCCAATAACTCTGTATTCCCTTGCAA AAGCCATTTTACATATCCCAGCCCACGTATGAAGATATAAGACTTTTTAGTGTGAAGTTCAATGGGGATGACGTTCGTTT CAATGAAAATTTGAACACACACTAAATTGGCTGAAGGCCAGCTTATCAAAATTTCTTCTTCCAAACACACTGAATAAGTT TATAAAAAAGTAGATTTCAGAAGAGCTGTGTTGATGAGATAGTTTTCCATTTTATTAAATTGGTTTGAACTTTGAAGTCC CTATCTCCTTATATTAATTCACTTTCTATTTTATTTCATTATATTCAAGGTGTACTAAAAAGTAGTGTTATAATTTTTAT TTTAATATTTTATTAAAATATAAAATATCAAGGGT
CDS sequence (LotjaGi3g1v0032700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAGCCTTGGTGATAGAAAGGAAGCTGAATGGATGGAAAGGATACTATCTGAAGGAGCCGTTCCACTTCTTGAGCC GGATAATTGTTCAAAAGGTTGGGCTTCCCCTCCAGGAGATGCATTCATGGTTAGAGGTCCTGAGTATTTTACAACAAGGG TTAAGATTCCTGCCGGTGATTATCTACTCAAGCCTATTGGTTTTGATTGGATTAGAAGTTCGGTGAAAATCGGGGAGATA TTAAATGATCCAAATAGTCGAGTTAGGAAGGTCATTGATAATGAGTTTCCAGCAGGTGATAAACCCTTTATATGGGCCTT CAATATTCAAGTCCCAACCAAGGATCATTATAGTGCCATTGCATATTTTACAACCAAAGAGCCTATTGCTGAAGGGTCGC TAATGGATAGGTTCTTGAAAGGTGATGATGCATTCAGAAACTCAAGACTTAAGTTGATTGCCAACATTGTAAAAGGTCCT TGGATTGTTAGAAAAGCTGTTGGAGAGCAGGCTATTTGCGTAATCGGCCGTGCCCTTTCCTGTAAATATTCCGTTACAGA GAATTTCATAGAAGTAGATATTGATATAGGGTCTTCTATGGTTGCAAGTGCAATAGTTCATTTGGCGTTCGGTTATATCT CATGTTTGACGGTTGATTTGGCTTTTCTTATTGAGAGCCAAGCTGAATTAGAGCTTCCAGAAAAACTTTTAGGTGCTTTC AGATTTTCTGACCTCGATCCTGCTTCAGCTAAAACAATCGAGCCATCGTCTGTCGAGAGTTCGGAAGGTTTACAGACATC TTTACCTACTAGGTGGTGGCAGTCTATTGGGCAGGGGTTTTCCCACATTCTTCATTCAGGTCCTCAAGAAGATGGCTCTA CTTCTGGATCACAACATGCTAATATTTTAGATAAAAAAGATAGTCAGACTGATGTCAAGCAATGA
Protein sequence (LotjaGi3g1v0032700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLGDRKEAEWMERILSEGAVPLLEPDNCSKGWASPPGDAFMVRGPEYFTTRVKIPAGDYLLKPIGFDWIRSSVKIGEI LNDPNSRVRKVIDNEFPAGDKPFIWAFNIQVPTKDHYSAIAYFTTKEPIAEGSLMDRFLKGDDAFRNSRLKLIANIVKGP WIVRKAVGEQAICVIGRALSCKYSVTENFIEVDIDIGSSMVASAIVHLAFGYISCLTVDLAFLIESQAELELPEKLLGAF RFSDLDPASAKTIEPSSVESSEGLQTSLPTRWWQSIGQGFSHILHSGPQEDGSTSGSQHANILDKKDSQTDVKQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 309 | 309 | 2.2E-174 | – | |
| PANTHER | 1 | 309 | 309 | 2.2E-174 | – | |
| Pfam | 34 | 246 | 213 | 2.4E-61 | ||
| MobiDBLite | 284 | 314 | 31 | - | – | |
| MobiDBLite | 284 | 303 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0032700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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