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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0053500 |
| Transcript ID | LotjaGi3g1v0053500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LURP-one-like protein; TAIR: AT2G38640.1 LURP-one-like protein (DUF567); Swiss-Prot: sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8; TrEMBL-Plants: tr|B9IGZ0|B9IGZ0_POPTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0053500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5573269..5575392) extracted from Lotus japonicus Gifu genome v1.2.
ATTACAAGTTGGTAGTACTATATATTGGAGGAAAAGGAATAAGAGACCGTATACCCTTCTCCAATATCAATATATATCTT CCATTGTGAATCTAACACTAGACCATCCTGCAAGAACACCATTAGCATTGTTTTGTGATTAGGTGAACTAATTAAGTTGA GGAATGACGAAGGTGTACCCAAAGGTAGCTCGTGTATCTGAGCCATCCGAGAGGCAAAAAGAATCCACAGACGGCAATCA TAGTGCCGCAGCGGTGGTCCTCACGGTGTGGAAGAAGTCTCTGTTGCCAAATTGCAATGGATTCACCGTCTTCAATAGCC AAGGGAGTCTTTTATTCAGAGTAGATAACTACATAGCAAGAAATAAAGATGAGATTCTTCTCATGGATGGTGCCGGCAGA CCCCTCCTCACAATCCGCCATAAGGTGCGTTAAAAATTGGTTCACTCATGAATTATGTTTACTCTTAATATCTAGTAAAT GTTATTTACGCTCCTTATGTACTAGACTCCTCATAAAAGAATATGTTATTGATTTACAGAGGCTAAGTTTTGGAGAAAAT TGGCTAGTGTACGAAGGAGAGGCATCGGGAAAACCTCTCTTCACAGCGAAGAAGCATGTCAACATCCTAAACAAAAGGTG TTTGACACAGCTTCTTCGCTGTGAAGATGGCCATAAGAAGAAGGAAGTCGCATATGAGGTTGAGGGTTCATATTCTCAGC GTTGCTGTGCAGTTTTTGATAACAAAAGGAGAAAGGTTGCAGAGATAAAGAAGAAAGAGGCTGTGGCTGGAGGAGTTGCT TTTGGTGCAGACATCTTCCGTCTGATTGTGCGGCCTGACATGGACACCACTCTTGCCATGGCCTTTGTCATCCTCCTTGA TCAAATGTTTGGATCATGAGATTCTCCTCTTCTTGAGTAATTAATAATCATCACTTTTTTTTTTTCTTTAGATAAATTTT CAACTTTTTTGTGTGTTTTTGGCTGGCAAAAAAATATGGATGAAGTTTTGATCTTTTTTCACACCAGAACTTTTTACACT GTATATCTCTACAACTTTTCCTTTTACAGAAAATTGGACAAAATGGAAAAGTATAGGGACAGTGTGAAAAAATTGAGTGT GGATGATGATCTCTATTATCATCACTTCTCCCATTACATGCAATATGCTGCCGCCACACCTTAGCTGTATTACCAACTCC CATGTGATCATAGAAGTTAAGATCCTCGAGTTTGGTTTTTTCATTTTATATAAAATTCCAAGCTCCAATTGAGGATGTAC ATACATCCATTCTCTTCATTTTAGAATGAAGAATGGAAGATTAATAAAGAAAAGATGATTATTGATGTCTTCCTGTAATG AAATTAACATGTTAATTGTCCTTTCTTAACCTTTTTTTACAGCAATTTCCTTGAATCCAAACTCATGGATTTTATTTCAT GGCACATCCATGAATCCAAACTTGATACTCCCGGTCCTTTTTATAAGAAAAACTTGGACAAAATCACACAAACCAAGGAA ATTAATATTTTTTATAAAATTAACTACTATGCTTAATTCCAATAATGTTTTTTCCTTTTTACAAGAACAATCATGCTAAT TACCATAAATGTTGATCATACATATTGGGTGGTTGCAATTTCCCTCCATATTTTTGTATTGGGAATAAGTCCCTTTGCAT TGGTATTGATAATTTGACTTAATTTTATAAGAGTGTTTCTTATAAAAAGGACCAAGAAAAATCTCCAAAGTGTTTCTTAT AAAAAGGACCGGAGGGAGTATATCAGTCCCGATTCACTAAATAAAAGCATTTTTTATTAGCGGTCTTTTTTGCATTTTGT GTCGGTCTTAAACGGCCACTAACCGTTTACGTGACAGTCACCCTGTTCGCTAGGGGTGTACAAGACCCGACCCTACCCGC CAACCCGATCATTAAAAGAGACCGGGGTCGGGTTGATCTTTGAGTTACCCGACTTCGGGTAGGGTCGGGTCTGGGTTGAC ACTCGGGTCACCCGGCCCGTCCCACATATATATTTTATAAAATTTTAATTTGTTATAATGATTAAAATGTGATACACGGT GCTCAAATTTATCTTACCGTGCAGATGAGATTAAAATGTCTAAC
CDS sequence (LotjaGi3g1v0053500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAAGGTGTACCCAAAGGTAGCTCGTGTATCTGAGCCATCCGAGAGGCAAAAAGAATCCACAGACGGCAATCATAG TGCCGCAGCGGTGGTCCTCACGGTGTGGAAGAAGTCTCTGTTGCCAAATTGCAATGGATTCACCGTCTTCAATAGCCAAG GGAGTCTTTTATTCAGAGTAGATAACTACATAGCAAGAAATAAAGATGAGATTCTTCTCATGGATGGTGCCGGCAGACCC CTCCTCACAATCCGCCATAAGAGGCTAAGTTTTGGAGAAAATTGGCTAGTGTACGAAGGAGAGGCATCGGGAAAACCTCT CTTCACAGCGAAGAAGCATGTCAACATCCTAAACAAAAGGTGTTTGACACAGCTTCTTCGCTGTGAAGATGGCCATAAGA AGAAGGAAGTCGCATATGAGGTTGAGGGTTCATATTCTCAGCGTTGCTGTGCAGTTTTTGATAACAAAAGGAGAAAGGTT GCAGAGATAAAGAAGAAAGAGGCTGTGGCTGGAGGAGTTGCTTTTGGTGCAGACATCTTCCGTCTGATTGTGCGGCCTGA CATGGACACCACTCTTGCCATGGCCTTTGTCATCCTCCTTGATCAAATGTTTGGATCATGA
Protein sequence (LotjaGi3g1v0053500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKVYPKVARVSEPSERQKESTDGNHSAAAVVLTVWKKSLLPNCNGFTVFNSQGSLLFRVDNYIARNKDEILLMDGAGRP LLTIRHKRLSFGENWLVYEGEASGKPLFTAKKHVNILNKRCLTQLLRCEDGHKKKEVAYEVEGSYSQRCCAVFDNKRRKV AEIKKKEAVAGGVAFGADIFRLIVRPDMDTTLAMAFVILLDQMFGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 2 | 206 | 205 | 6.4E-81 | – | |
| PANTHER | 2 | 206 | 205 | 6.4E-81 | ||
| Gene3D | 25 | 206 | 182 | 1.8E-52 | ||
| Pfam | 28 | 198 | 171 | 1.1E-48 | ||
| SUPERFAMILY | 28 | 204 | 177 | 4.18E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0053500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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