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LotjaGi3g1v0056400.2

Overview

Field Value
Gene ID LotjaGi3g1v0056400
Transcript ID LotjaGi3g1v0056400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Inositol polyphosphate multikinase; TAIR: AT5G61760.1 inositol polyphosphate kinase 2 beta; Swiss-Prot: sp|Q9FLT2|IPMKB_ARATH Inositol polyphosphate multikinase beta; TrEMBL-Plants: tr|I3SG32|I3SG32_LOTJA Inositol polyphosphate multikinase; Found in the gene: LotjaGi3g1v0056400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:5897483..5900262) extracted from Lotus japonicus Gifu genome v1.2.

ATTCACTTGTCCTTCTCTCACACAACAAAACAAACAAAATCACCGTCATCGCCCCTAGTTTATTTTAACTTTTTAAACTC AGAAGTAAGATCAGCTTTTATATAATCAAAAAAACTTGTTACCTTTCACTTTACAAATTCCACAAAAATGCTGAGGGTCC CAGAACACCAAGTCGCAGGCCATAAAGCTATTGACGGTGTTCTCGGCCCTCTGGTGGATGATTCTGGAAAATTCTACAAA CCTCTTCAGAGCGACCATCGTGGTTCCAACGAGGCCACATTCTACGAAACCCTGTCTTCCATTCCCGACAATATTCGATC GTTCTTCCCGGTTTTTCATGGGATTAAGGAAGTTGAAGCTTCTGATGGGTCTGGTCTTCATCCTCACCTCGTACTGGAGG ATATTCTGGCTGGTTATGATAATCCCTGTGTGATGGATGTTAAGATCGGGTCTAGGACTTGGTATCCCGAGGCGGCTGAG GAGTATGTCAGGAAGTGTCTTTTGAAGGATAGGGAATCGTCGTCTATTCATCTGGGTTTCAGAATTTCAGGTTGGTTACT GTTTTATTCTCTTTTTCCTTAGTGGTAGCTGTATTAGCTCTTTTGGATGTAATTGGAATCATGTTTTGTAATGTTAAATA TTTATAGAATATCAATCAAGTGGTACATGTTTGATCCATCTTAGTATCGTGTATTGAGCTCGAGTATTGTGGATGAGAAA AACTTGCGGGAAGAGCTAGTCCCACCAGGATGTGGATGTTTGAACTGGATTGCGTGTCTCGAGGAGGAGACCTCTTGTAG AATTCTAATAAAAAATAGTTAGAGGAGTTTTATTGATCATAATCATGTTTATGATTTTTTTAATGATTAATTTTATTTTA TTATCTTATTTTAATCAGTGTTGTTAATGACATCTTTCCGGTGTACCAAAAAAAACTGTTGTTAATGGCGGATGGTGGAA AGCCAAAAACAAGTCATATTTGACAAATACTGATGGTGGATAATGGCGGATTATGTTGAATTATGGCAGGATATCGGCCA TTACGACTTGCTGGAATTCCACCATGGTTGGTATTTGACAACAATGTATGTAATTAGACTTTTTAAGATTACTTTAACAT ATAATAATAGATCAATTTTATTAACTTTGGGTGTATTTGGTGCAATAAAGGGGAAGGGATGGGAGGGATTGTAATGGAGG GGAGGAGACATAAACTTCAATTCTTATCATGTGTGATGTGTGGTTTAGAGGAGGAGAGGGGAGGGAAAATGACTTTTTTC TTCATGGGGGAGGGGGAGATTTTAAGACAATTTACTTTAATTTCCCTCACTATTAAAATACTCCCTCCGTCCCTTATTAT AAGACCCCTTTTTTCTCATAATAAGGGACGGAGGGAGTACAACTTTAAGTTCTAAAATATGGGACTGAGTATTTTTATCA TATGACCTCCAAATCCCCCACTTTTGCAGGATAGACAAAATTGAGTCATGATTCATGAAGGGTTTTGTCCCATCCCCTTA AAGAACTCTCCAAAACAAGTAGACCCGTCAAGTAGACCAAATATAACACAAAAGTGATGGGTTCTGACTTTTTTATAAAC AGCTATCAAAATGTATTGTGTTTGATGATATTTTCTGTCTTGTCCTATTTTAGTTAATGTTTTCAGTGTTTTGTATAATT TGTCTATCAATTGCTGTTAGGATTGAAGTCTGTGGGACCTTCCAAGCAAGACCCCTCTTCATGCTGGCAGCCCCACAAGA AGTTCCTTCAGAGTCTCTCTGCTGATGAGGTCAAATTGGTTTTGAGCAAGTTTGTTTCTTCTGACGGTAATGCTGACCCA GATTCTGCTTTTGCCTGTGAGGTTTTTATGCCAGTTTTGAAGCAGCTTTTGGAGCTTAAGAAATGGTTTGAGGTTCAAAC CATCTTTCATTTTTATTCTTGTTCTGTTCTGGTGGTGTATGAGAAGGGGGAGCGTGTGATGAATGGGAAGAAAGCCGGTG CTGTGGTTAAACTCGTTGATTTTGCACATGTGGTGGATGCAAAGGGTGCCATTGACCATAACTTCTTGGGCGGGCTTTGT TCTTTGATTAAGTTTGTTCAAGATCTCCCATCTGGGGTATGGGAAAGCGTTTCCGAAGATGAATGCTGAGTGAGATTCTA CTGCCTTGGCTCTGTTGTTTCTTTCTGTTGGATTCCTTGCAAGTGAATTCCCAATTGAGAATTTCGTAGTTATCTTATGG GGAGTTCATATCCTCATGTTGTAATTTCTTTCCATCTTATGATAAGGTTCAATGCAGAGAAATTGCTTCCTTTCTTTTGG TTCATGTTGCAGGCTCAAATTTCCTTACTAGTGACTTGGACTTTGTCTGATAAGATGGCTTATTCTATAAGGTCTTTTTG TAACTGTTTTAGAAAGTTTCAAATGATGCTTTAATGTCCTTGTCATTACTTAATAGCATGCTTGGTAAAATGTTTGTTGT GTGGCTCTACTTTCGAGCTGTACTGATTATCTTTGATTTGTTCTGAGCTTAGTGAAGGTTTTAGTTGGAGAAGCAATGGA AATATTTCCAATCCATCTCTCAATATAATAGGTAACTTTGTGACTATTTGAGTGACAAACTTACAAAATTGGCTACTTGC CTCGTGTGACTAACATCATCTTTATGTCTGTTGCTGTATAACTCTTAGGCTATCCTTCAGAACTCTTATAATTTTTAAGG TAAACATCAATTTAACTAGTATTTATTTTGCTGGCAGTTTAGTGATTATAATCCACGGCC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0056400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGAGGGTCCCAGAACACCAAGTCGCAGGCCATAAAGCTATTGACGGTGTTCTCGGCCCTCTGGTGGATGATTCTGG AAAATTCTACAAACCTCTTCAGAGCGACCATCGTGGTTCCAACGAGGCCACATTCTACGAAACCCTGTCTTCCATTCCCG ACAATATTCGATCGTTCTTCCCGGTTTTTCATGGGATTAAGGAAGTTGAAGCTTCTGATGGGTCTGGTCTTCATCCTCAC CTCGTACTGGAGGATATTCTGGCTGGTTATGATAATCCCTGTGTGATGGATGTTAAGATCGGGTCTAGGACTTGGTATCC CGAGGCGGCTGAGGAGTATGTCAGGAAGTGTCTTTTGAAGGATAGGGAATCGTCGTCTATTCATCTGGGTTTCAGAATTT CAGGATTGAAGTCTGTGGGACCTTCCAAGCAAGACCCCTCTTCATGCTGGCAGCCCCACAAGAAGTTCCTTCAGAGTCTC TCTGCTGATGAGGTCAAATTGGTTTTGAGCAAGTTTGTTTCTTCTGACGGTAATGCTGACCCAGATTCTGCTTTTGCCTG TGAGGTTTTTATGCCAGTTTTGAAGCAGCTTTTGGAGCTTAAGAAATGGTTTGAGGTTCAAACCATCTTTCATTTTTATT CTTGTTCTGTTCTGGTGGTGTATGAGAAGGGGGAGCGTGTGATGAATGGGAAGAAAGCCGGTGCTGTGGTTAAACTCGTT GATTTTGCACATGTGGTGGATGCAAAGGGTGCCATTGACCATAACTTCTTGGGCGGGCTTTGTTCTTTGATTAAGTTTGT TCAAGATCTCCCATCTGGGGTATGGGAAAGCGTTTCCGAAGATGAATGCTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0056400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLRVPEHQVAGHKAIDGVLGPLVDDSGKFYKPLQSDHRGSNEATFYETLSSIPDNIRSFFPVFHGIKEVEASDGSGLHPH LVLEDILAGYDNPCVMDVKIGSRTWYPEAAEEYVRKCLLKDRESSSIHLGFRISGLKSVGPSKQDPSSCWQPHKKFLQSL SADEVKLVLSKFVSSDGNADPDSAFACEVFMPVLKQLLELKKWFEVQTIFHFYSCSVLVVYEKGERVMNGKKAGAVVKLV DFAHVVDAKGAIDHNFLGGLCSLIKFVQDLPSGVWESVSEDEC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12400:SF82
2 270 269 5.1E-110 –
PANTHER
PTHR12400
2 270 269 5.1E-110
IPR005522
SUPERFAMILY
SSF56104
5 270 266 2.98E-55 –
Gene3D
G3DSA:1.10.510.50
40 277 238 3.1E-68
IPR038286
Pfam
PF03770
80 267 188 2.4E-47
IPR005522

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0032958
Biological process Inositol phosphate biosynthetic process The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0056400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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