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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0062900 |
| Transcript ID | LotjaGi3g1v0062900.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Annexin; TAIR: AT5G12380.1 annexin 8; Swiss-Prot: sp|P51074|ANX4_FRAAN Annexin-like protein RJ4; TrEMBL-Plants: tr|I3S6J0|I3S6J0_LOTJA Annexin; Found in the gene: LotjaGi3g1v0062900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6641433..6644487) extracted from Lotus japonicus Gifu genome v1.2.
TGATGATCGTGTCAAGGCGTTAACATCAAAGAAGCCATTGGCATTATATATAGAACCAACTCCACCATCATATATTATAT ATTTCTTCTTCACATACACTACTAAGAGAGAAAGCAAGAGCTTAATTGAGTGTTTCCATGGCTACCCTCGTTGCATTTCA ATCATCTCCTAAGGATGATGCTGAGGCTCTCCAAAAGGCTTTTAAAGGTATCCTATACAAATTAAGTTACACATTATCTT CAATTTTATTTAGTTTATATTTGAGCCTTGGTTACTCACATTTCTTAAACTTTGATTGTAAATTAGTACTTAATCTTCTT GGCTCTTCAGTTGGGTTCATTTCATTTTTTTGTTTAATTTTTATTTTGATCTATGTTAGAGAATACACATAGTTGAATCA CCTCTAAATCTTTCTTTTTTACTGTTTTTGGTCTATGTCAACAGAGGATTAGCACTAGAATTTAACATGATTTTTTCATT ACAAATTTTGGTTTGAGCTAAATGTTATCTGCAACAGTAAATGGATGTTCATATTGAATTTTAAATCTTACCAACACACT CACAGCACATCTATTCAAATTGCATATGTAGTTAGGTGTGTTCCCACCTTTTAAATTTTTCCTAAGATTATTAGTTGAGG CATTAAATCATTGCTATATATTGATTATTCGTGAACACTTTTGCTTTTGCCTTCTGCTGCATATATAAACCAAAATGGTT ACCTAAGGCCTTGGCATTGATGATTCAATGAATACTTATAAGGAATAAACAACTCAGCATCTCTCATTTCATAGCAATTA AAGGAAAAATATAGCTACCTTTCTTCTATTTCCTACTGAAATGAAGTTCCAAATTATTGATAGTGACTCTAGAAGATTTT AACATTGCTCTAAACAAACTTGGACACCATAAAAGCATAGTTCATAGCTGTACAGCTGTATCTGTAATTAAAGATCTGAT TAAAAGGTCCAAATTGGGAGTGGCCAATTCTTATTTTGAATTTTTGATCATTGAACTTTTTATAGAAGATTTTGGCATTG CTCTAAGAAAACTGCATCATTAAAAGACAAGGACACAAAAGCATAGCTCATAGCTGTCTAGGTTACATTATATGTTGAAG AGCTAGGAAACTATACTCAAACATAACCAAAACTTGAAAAAATAGGAAGATATAATCAAATATGGCCACACTTATTGCTA CCACTCAGCATTCACCTGTTGCAGATGCAGAAGCTCTTCGAAATGCTTTTCAAGGTTACACCATTTCTTAATTGAAAAAA AAAAAAATTACATTGGTTGGTTGATTGGTCGAGGTTATGATTTTTCTGCCATATTGGAAATACATCAAGAACATTGACTA AGTGACTTGATCAATATGATGCATCTTTTGATAAAGTAAAATGTGATATAGTACTAATTGAAATTTAATGGTTTTGCACT TTCTGCAGGATGGGGGACTGATGAGAAGACTGTGATAGCAATATTGGGTCATAGAAGTGTTCATCAGAGGCAGCAAATCA GAAAGGCTTATGAGGAGCTTTACCAAGAGGATATCATCAAACGCCTCGAGTCGGAGCTCTCTGGTGACATTGAGGTACTA TTATAGAACACGATTTTGCCAACAATGTCATATAGTTTTATCTTACCCTCCTGAGCCATTGATTTTGAATAATGGTGTCT AAACAAAACAACAGAAAGCTGTGTATCGCTGGATGCTGGAACCTACCGATCGCGATGCTGTTCTAGCCAATGTGGCCATC AAGAGTGGCGGCAAAGGGTACAATGTGATTGTGGAAATTGCTACTGTCCTTTCACCTGAAGAGGTCTTGGCTGTTAGGCG CGCCTATCACAACCGCTACAAGCGTTCCTTAGAAGAAGATGTAGCTGCTCACACCACCGGTGATCTTCGCCAGGCAAGTC ACTCAATCATATGAGCTTGTTTGATTCTCTTCTCAGTTTTCTGAATTTTAGAACTATTTATACTTATGTTCTGAATCTGT GCTTGGTTTTGAATTTTGGCAGCTATTGGTTGGGTTGGTGAGCTCATTTAGGTATGGAGGAGATGAGATCAATGCAAGAT TGGCAAAAACTGAAGCTGATATTCTTCATGAATCTATCAAGCAGAAAAAGGGCAACAATGAAGAAGCCATCAGGATCCTT ACCACAAGGAGCAAGACCCAACTTGTGGCCACTTTCAACCGCTACAGAGATGACCATGGCATTTCCATAACTAAGGTACT ACAAAAGAAAAAAAGTTCATCACTCTTTTCCTCTTTCTTTTCTTTTTGCCTCCATTTTCCTTAAAGTTCTTAGTATGTTA CAAATTTTTCTGTCATGTTCAATTACAGAAATTGTTGGACAATGCATCTGATGACTTCCATAAGGCATTGCATACGGCTA TTCGCTGCATCAATGACCACCAGAAGTACTATGAAAAGGTCAGATTCTAACTAAACCTATATCTGCAAGAGCAGTGACAG ATCCATAAACTTTAAGTTACAATAACACCAAATTAGCTTACATGCTTAACAAATGATAGAATTACTAGTATCATGTACTA TACAATGATTTAGCATTGAATTTTTTGAGCATTATGTGTAGGTTCTGCGCAATGCACTGAAAAGGGTTGGAAGTGATGAG GATGGACTGACCCGCGTGGTGGTGACAAGGGCTGAGAAGGACCTGAAGGAAATCAAAGAGCTGTACTATAAGAGGAACAG TGTTCATCTTGAGGATGCAGTGGCCAAGGAACTCTCAGGGGACTACAAGAAGTTCATCCTCACCTTGTTGGGGAAGCAAG ATTGAAGTAATTAATTGGTCTTGCTAAGGGAAAGTCTTGTCATGGATTCTGGTTATGTTGGTTTCTTGTAGATTGGTCTG GTTAATTTCCCTATTTAGAGTGTGTTTTCATGAGTCCTGTCTTGTTTATCATCTGTTTTGTGAGACTATATAAACTTCTG TCTTAATTAATGACTATATTTGATGTTTAATTTTGTGTTTATAACCATTATGTCTGATCCAGGGGTTGATCGTCTCATCT TTTAATGAGTTATTT
CDS sequence (LotjaGi3g1v0062900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACCCTCGTTGCATTTCAATCATCTCCTAAGGATGATGCTGAGGCTCTCCAAAAGGCTTTTAAAGGATGGGGGAC TGATGAGAAGACTGTGATAGCAATATTGGGTCATAGAAGTGTTCATCAGAGGCAGCAAATCAGAAAGGCTTATGAGGAGC TTTACCAAGAGGATATCATCAAACGCCTCGAGTCGGAGCTCTCTGGTGACATTGAGAAAGCTGTGTATCGCTGGATGCTG GAACCTACCGATCGCGATGCTGTTCTAGCCAATGTGGCCATCAAGAGTGGCGGCAAAGGGTACAATGTGATTGTGGAAAT TGCTACTGTCCTTTCACCTGAAGAGGTCTTGGCTGTTAGGCGCGCCTATCACAACCGCTACAAGCGTTCCTTAGAAGAAG ATGTAGCTGCTCACACCACCGGTGATCTTCGCCAGGCAAGTCACTCAATCATATGA
Protein sequence (LotjaGi3g1v0062900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLVAFQSSPKDDAEALQKAFKGWGTDEKTVIAILGHRSVHQRQQIRKAYEELYQEDIIKRLESELSGDIEKAVYRWML EPTDRDAVLANVAIKSGGKGYNVIVEIATVLSPEEVLAVRRAYHNRYKRSLEEDVAAHTTGDLRQASHSII
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 146 | 146 | 3.8E-75 | – | |
| PANTHER | 1 | 146 | 146 | 3.8E-75 | – | |
| Gene3D | 2 | 80 | 79 | 6.6E-26 | ||
| SUPERFAMILY | 8 | 148 | 141 | 5.11E-48 | ||
| ProSiteProfiles | 9 | 80 | 72 | 25.945 | – | |
| Pfam | 14 | 75 | 62 | 2.1E-23 | ||
| PRINTS | 23 | 45 | 23 | 2.2E-12 | ||
| SMART | 26 | 78 | 53 | 4.8E-20 | ||
| PRINTS | 63 | 79 | 17 | 2.2E-12 | ||
| ProSiteProfiles | 81 | 151 | 71 | 13.455 | – | |
| Gene3D | 81 | 151 | 71 | 1.2E-15 | ||
| Pfam | 86 | 146 | 61 | 1.1E-9 | ||
| PRINTS | 90 | 111 | 22 | 2.2E-12 | ||
| SMART | 98 | 150 | 53 | 3.5E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Calcium-dependent phospholipid binding | Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium. |
Expression pattern of LotjaGi3g1v0062900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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