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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0074100 |
| Transcript ID | LotjaGi3g1v0074100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1005 family protein; TAIR: AT5G17640.1 nuclear factor 1 A-type protein (DUF1005); Swiss-Prot: sp|O87131|CHER1_PSEAE Chemotaxis protein methyltransferase 1; TrEMBL-Plants: tr|I1KJC7|I1KJC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0074100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8136507..8141264) extracted from Lotus japonicus Gifu genome v1.2.
AACCAATTAATTAATTGATAATGTAATACTACTATTAATATTCAATCACTTTCTCTATCATACACAAAACACTGAACACA CAAAAAGTATAGCATTTTCATTTCTCTTTCACTCAATTTTTGGTAATCATTCTCGTGATCATGGCTTCTTCTTCTTCTTC TTCCCTGTCCCTCTCTTCTTAGTTTGTTTCCTCAAAACCCCATCTTCTGAAATCACCCATTTCAAGTTTTGAAGTTTGGA CACTGGAAAAGGTAAGATTTTTATAGCTGTGTTTTGTTAGTTTCATCTATAAAGGAAAACCCATTATTTCCTGGGATTTT TATGTTGTTTTTTGTTTCTGGGCTATGATGTTTTTGTTTTATAGTTACTTTGTTTTTGTGAGTACTATTATTGTGTTTAT CTTAGCTTTGAGCTCTGTGTTGAAGTGTTTTGATGCATTATTTGGTTACTAGGTGAGTTGAGTTTGCATTTTTGTTGCTA CATTTTTATTTATCTGTGCTGGAGTTTGACGTTTGTTCTGTTGTTCTGTTGTGTTTCTTCATTGTTGTTTTCACTTGCTA CTTTTGTCTAATGCAATTTATGGGCCACCCCACATCATGGATGGGATTGTTGACACGTTTCACTTGGCCCTTTGTAGTCA TCGATCACAATTGACTCCTTCTCAAACAGTTCAATTTTGTTCCAAAAGTTTCTCAATTGCTTGAATTTGTTGTATTGAAA TAATAATATAAAACCATTCTTGTGGCTCATACTCAAAAGCTAAGCTCTTGGTATAATTGGTTGTTTGATATGGTATCAGA GCTTGGTTTTTTTCTCTGCTTTGCTCAATTCCTTAAGTCTCCGGGGTAATTGAGTTTGATGAGGTTGGCTCTGGTTAGAG TTTGTTGAGGTTGATTATACTTGTAGCTTTTCTCTCAAGCTATAGATGCACTTGTTAGCAATCTCTTGATTGAAAATTAT TCTTGGAGTTTGAGCTAAGCTGATCAGTTATTTGGATGTGTTAGTTTATTTTTCTTTTGCCATGTGTGCCTCACTCTGAA GTTCATGTTGTTTTATCTATATCTTTCCTTAAATTGCAAGGAAGTTGAGAAAATTTATGAGACTGGTAAGTTTAACAGAT TGCTTGGTACACTCATTTAACAGAATTTTGTCCCCTTTATAAGCTTACCTATTCTCTATCATTTTCCACTGGGAAATGAA CCTTTAACACTTAGAGAATGGCACATGTCTGTGCTGTATTAAGAATCAGAAAGCAAAGTTGATGAATACCAAGCTTATTC CTTTCAATATGATCACTTCTACTGCTACATGAATAAAAGATTTGAAATAATATCATATTCCATGGTCATGTGTTCCATGA AACAAAAATACACTTTTACAAATGATGTATTCTGGACTTATTTTTGAAACTCTCTAACATAATGATCAGTATTGAACAGA ACAGTAAACAGTTGTAGCCACTGTTATTCGATTCAAAGCATTTAGTGCTTGGTAAGATTAGATCTTTTCTCTCATGATGC AGAAAAATCTTATCTATTCTTTTCTTCCCTTTAAGTGCTATAACTTTTTTGAATTGTTTTGAATGCTTTACAACCTCCAA ATTAAATTTCTAAACAATGTCAAGTGAATTTTTCATTTTCCATGCCTCAAACCTGGAGTCTTAAGGATGTATGCATCAAA TTGTTAAGTGGCAAAAATTTAGAGTAGGATAGTATGCATCTTTGATGGGAATAGGGAAAAATCTGAAAAGTAAACATGGA AACCTTCATTTTCTGTAGAAAACTTCAAATCAGTCACTATTAAATACAATATAGTTTGTGTCAAAACAAAAAAAAGGTTA AGTTGAAGCAGAATATCTCAAGGAATTCTCTGGGAGAAGTATTCATATACTCATGACTAAGCTTTTTGCTTTGTTGCCTT ATCCAACGCATGTTGTTCTTCCCCGTGATTAGTTTGTTTCCAATATCTCCACAATAAAGTTGTACACTCTTTGAGTCCAT GTTATGTAAAATGGTTCTCCCTTTTATTTGCCTTCACATCATTTGCTTCATTGTATGCTAACTTATGTAAGCTGGTCGTT GTTCTAATACTAATGAAATAAATGCTTGCTTTTTCTTTTCGTTTCTGATTTGATTATCATTTGTCAAATATTTCACAGGA CATCTTAGTTTTATAAAATTAGTGCTTTGGATCCAATGAGGGGACAATTGTGACAATTATGGATCCTCAGGCCTTCATTA GGCTGTCAATAGGCTCTCTGGGGTTGAGATGTACTGGAATCGAACTGAGCACTGGAAAATCTGGAGTTCACAGATTCTCT TCATCTTATGTTTGTGAGATACGACTTCGAGGTTTTCCTGTTCAAACATCATCTGTCCCCTTGATAACCTCTTCTGAAGT TATACCTGATACTCAGAACATTGCTTCAAGCTTTTACCTTGAAGAATCTGATTTAAAAGCATTGCTTGCTCCTGGTTGTT TCTACAATTCAAATGCTTGTCTGGAGATTGCTGTATTTTCCGGGAGGAAGGGATCCAGTTGTGGAGTCAGCATCAAAAGG CAGCAAATTGGGATTTTCAAAATGCAGGTCGGCCCTGAGTGGGGTCAGGGAAAGCCATTGATTCTTTTTAATGGGTGGAT AGGTATTGGCAAGAACAAACAGGAGAACGGAAAACTGGGTGCAGAGCTACATTTAAAAGTAAAACTAGATCCTGACCCTA GATTTGTATTCCAGTTTGAAGATGTAACGACATTGAGTCCTCAAATAGTTCAACTGCAAGGATCTATCAAGCAGCCAATC TTCAGTTGCAAGTTTAGTAAAGACAGGTGATATGAAGTATTTTACTTCCAATTATGTTGAGTTCTATTGGAATTATTTAA AATCATGACTTATTTTCTCATAAATTAGATCTATGTTTTAAAGTCTTAGTCAATAACATGTTTCAAAGAACCGTAACTCT CCCAAGTCCCTGCTCCACATATGTTTTTTGAGGTAAATGTGTTTGATACGGATTAGGATCCTATGTCACATGGCATTTTA ATGTAAAACTTTGTTTTTATTTCTCTCTTTATAAATATTTAGAGGGTCTCATTCATTTAAAAGGTATGAAGTGAGAGATA TACACAAAATTTCAACATAACACTGTCATGTGAAGTTTCCACAAGAGAGGATCATGATCCGTTTGATACTAAGTTTGCTG CCTGGTAAAGGTTTTCCCGATTGGTTCATTCATAGAGTTCTACTATACAATTAACTCCTTTCAATTATTAGATTGTAATT TTTAAGAAAAAATAATTTACTTTTATCCTTTACATAACAAATCACATTACTTTTTTCATATAGAGCTGAAATGTTTCTTC TAGGGACGTAATCAAGTATATTTTTCTGTGCTTTCTAAAGCTAAAACACAAATAACAGAATGCCCTTGTAGACTAATGTA GTTAACCAACCAATGGAAGTTTAAATTATATAAGCCATTTTGTCAGAAGAAGTCCGAGGTCTGATATTTTTTGAACATGG AATTTAATCCTTCTCTCAAATCAATATTTCAAATGCAAAGTGGTAGCTGATTTGTTCATTGTTTGTGCCAATTGGACCTT ATATCTATAATACACAACCTTTTCTAAAAAATTGTTATTAATAAAACTTTTGGTAGTTATGAAATGACAGGGTTTCCCAT ATTGACCCGTTGAGCACATACTGGTCAGATTCTATGGACATTTCTGACTTCGAGACTGAGAGGAGAGAGAGAAAGGGGTG GAAGGTGAAGATCCATGACCTATCTGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTT GTGATTGGGTTGCCAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTCCCGATGTCGGTAGATCCGAGAGCTGGCAGCCT TGGGGAAAGCTTGAAGCATGGCGTGAGCGTGGCCTCAGAGACTCCGTGTGCTGCAGATTCCATCTTTTATCTGAAGCTCA GGAAGGAGGTGAACTCCTCATGTCTGAAATACACATAAATGCTGAAAAGGGTGGAGAGTTTTTCATAGACACTGAAAAGC ACATGCGAAATGCCGCAGCAAGTCCAGTACCAAGTCCACAAAGTAGTGGAGACTTTGGTGCACTGAGTCCAGTAGTTGGA GGTTTTGTCATGTGCTGCAGAGTTCAAGGCGAGGGGAAGCGGGGCAAGCCATTGGTACAACTGGCATTGCGACATGTGAC GTGTGTGGAGGATGCTGCCATCTTCATGGCGCTTGCAGCTGCTGTTGATCTCAGTATCGAGGCTTGTAGACCTTTTCGTA GGAAGATCAGAAGAGGTAAACAACATTCTATGTGAAGAACAAGGCTAATGTTAGTACAAGCATTGTCACTAATTTGAATG CTCTTCCTTTTCATTTTCATTGCTGCAATAGTTCAAAAAATGTACAGCATAAGTTGCCACACGTTTCCCACTTCAGAATT CTTCAACTTATTAGCATTGTGATGTCGTTGGCTACATGGCAATGGAGCCTTTGTAGTTTGTACAGTTAAGATGCATGAAA CTAGCTCAAGTCAATCAACTTTTCTAGATTTGACATCATTCAAAAAAGCTTCTACTCTGATAGCTGTTATTGTCACAAGT CAAATATCTTTGCTTCATTGTTGTTGTGAATTTACTAAACTTGATGCAAATAATGAAAATATTTTAGTTGGAGTTAGATT AAAGGAGCAATTAATAGGAAGGATGAGATAAATGGGAA
CDS sequence (LotjaGi3g1v0074100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCTCAGGCCTTCATTAGGCTGTCAATAGGCTCTCTGGGGTTGAGATGTACTGGAATCGAACTGAGCACTGGAAA ATCTGGAGTTCACAGATTCTCTTCATCTTATGTTTGTGAGATACGACTTCGAGGTTTTCCTGTTCAAACATCATCTGTCC CCTTGATAACCTCTTCTGAAGTTATACCTGATACTCAGAACATTGCTTCAAGCTTTTACCTTGAAGAATCTGATTTAAAA GCATTGCTTGCTCCTGGTTGTTTCTACAATTCAAATGCTTGTCTGGAGATTGCTGTATTTTCCGGGAGGAAGGGATCCAG TTGTGGAGTCAGCATCAAAAGGCAGCAAATTGGGATTTTCAAAATGCAGGTCGGCCCTGAGTGGGGTCAGGGAAAGCCAT TGATTCTTTTTAATGGGTGGATAGGTATTGGCAAGAACAAACAGGAGAACGGAAAACTGGGTGCAGAGCTACATTTAAAA GTAAAACTAGATCCTGACCCTAGATTTGTATTCCAGTTTGAAGATGTAACGACATTGAGTCCTCAAATAGTTCAACTGCA AGGATCTATCAAGCAGCCAATCTTCAGTTGCAAGTTTAGTAAAGACAGGGTTTCCCATATTGACCCGTTGAGCACATACT GGTCAGATTCTATGGACATTTCTGACTTCGAGACTGAGAGGAGAGAGAGAAAGGGGTGGAAGGTGAAGATCCATGACCTA TCTGGCTCAGCTGTAGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCCAGATCCAA CCCAGGAGCTTGGTTGATTGTTCGTCCCGATGTCGGTAGATCCGAGAGCTGGCAGCCTTGGGGAAAGCTTGAAGCATGGC GTGAGCGTGGCCTCAGAGACTCCGTGTGCTGCAGATTCCATCTTTTATCTGAAGCTCAGGAAGGAGGTGAACTCCTCATG TCTGAAATACACATAAATGCTGAAAAGGGTGGAGAGTTTTTCATAGACACTGAAAAGCACATGCGAAATGCCGCAGCAAG TCCAGTACCAAGTCCACAAAGTAGTGGAGACTTTGGTGCACTGAGTCCAGTAGTTGGAGGTTTTGTCATGTGCTGCAGAG TTCAAGGCGAGGGGAAGCGGGGCAAGCCATTGGTACAACTGGCATTGCGACATGTGACGTGTGTGGAGGATGCTGCCATC TTCATGGCGCTTGCAGCTGCTGTTGATCTCAGTATCGAGGCTTGTAGACCTTTTCGTAGGAAGATCAGAAGAGGTAAACA ACATTCTATGTGA
Protein sequence (LotjaGi3g1v0074100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPQAFIRLSIGSLGLRCTGIELSTGKSGVHRFSSSYVCEIRLRGFPVQTSSVPLITSSEVIPDTQNIASSFYLEESDLK ALLAPGCFYNSNACLEIAVFSGRKGSSCGVSIKRQQIGIFKMQVGPEWGQGKPLILFNGWIGIGKNKQENGKLGAELHLK VKLDPDPRFVFQFEDVTTLSPQIVQLQGSIKQPIFSCKFSKDRVSHIDPLSTYWSDSMDISDFETERRERKGWKVKIHDL SGSAVAAAFITTPFVPSSGCDWVARSNPGAWLIVRPDVGRSESWQPWGKLEAWRERGLRDSVCCRFHLLSEAQEGGELLM SEIHINAEKGGEFFIDTEKHMRNAAASPVPSPQSSGDFGALSPVVGGFVMCCRVQGEGKRGKPLVQLALRHVTCVEDAAI FMALAAAVDLSIEACRPFRRKIRRGKQHSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 429 | 429 | 9.9E-234 | – | |
| PANTHER | 1 | 429 | 429 | 9.9E-234 | ||
| Pfam | 1 | 424 | 424 | 1.6E-181 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0074100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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