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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0074200 |
| Transcript ID | LotjaGi3g1v0074200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer, beta subunit; TAIR: AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein; Swiss-Prot: sp|P0DJZ9|RPOTF_PRRSL Replicase polyprotein 1TF; TrEMBL-Plants: tr|A0A151U7C4|A0A151U7C4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi3g1v0074200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8169454..8177941) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGTGGAGTTGGAGCCTCGCGTGAAGGCTCTTCCGTTCAAGGTCAAAGCCATGTCCAGGGAATCGCCGTCGCAGAA AGCCCTCCATGTCCTCGACACCGACCTCCGTTCTCACTGGTCCACCGCCACCAACACCAAGGAATGGATACTCCTCGAAC TCAACGTGCGTGCGTCCTTCTCTTCCTAAACCCTATCTCCTTCCTTCATTTTCACTTGTTGCTGTTTCTCTTGATTCATC AATGTCTGAACTCTCAAACACTGTAACTAGTCAATCTGTGTGTTCATGCTGAAAATCAATAATCAATTTTATGTAAATGG AAGGAGTTTCTGGATTTTATTGCAAAGGAAGAGTTTATTGTAATGTAACTAGTTCACAAGTTATTGGGGACTTGAATTGA ACTTGCATTTGGGTACTTTTTTGTGTTATTAAGTAGGTTTTGTTGTGTATTTGTTTTTTCAGGAGCCGTGTCTATTGTCG CATATTCGGATTCATAACAAGTCTGTGCTTGAGTGGGAGATTGCAGTTGGTTTACGGTACAAGGTTAGGCGCTTGAAATG TGTCTAGCAAAGGGATCATGGAAATTGATATTATTCTTTTTTATAATGTATAGTTTATTGATTTATAAAGCTTATTATGT GTCTACTGTAAAATTTTATTTAGGCTAGTCGATGCTTTATAAAGATTAGAGGGGAATTTTGTGGTATGCCAATGTGAGGA TCGTTGGAAGTATTCTATTTGGCTTGGTTATTATTTAATGAATGTCATTAGTATATAATCCAATGATCATATGCAGGAGG TTCCATGATAAATGGTACCAGTGTGTAATGTAACGCCTATTACGCATTACATTGAGTATTTATTGGTCAACTGGTATATA AGTATTGAACACTTTCTGACATTGCATCTTCTAAAAGCAAAATTGAGTGTTGGCTGGAAATGGTGGACAAAATGAATGAC ATTTCTCGTTTTTTTGGTTGAACCTTTGGTATGATCAATCTTATTAGAATTTGTGTCTGATCATTGTCTTTCATTAGGGT TTTCTGAAGACTTTGTGGATAGGCTCCTGTTGTTTTACTGACTAAGGATATTGTCAACAGGATGCATTCTTCTCGAATTA TTTCTTGACAGACTGGCCATTCAGGATTTTTAATAAATTAAGTTGTGCTTAATAGATGATTATAAATTAATTGATTGGAA CATGAATATTGAACTAACAACTTGATTTTAAAGGATGTGAAGGTCAAATCGTGAATTTCACTTGGTGTGGATGTTATTTT GTTATCAACAGAATGTTGAGTTATTTCACTTCAGCATTACTTATTGTTTTACTTGCTTTTAATTATGCATATCTAATATG AATAATATCATGGTGCACACTTTGCTGATTCTTATTAACTTGCCAGCCAGAGACATTCCAAAAAGTTCGCCCACGTTGTG AAGCGCCTAGACGTGATATGATCTACCCTATAAATTACACTCCATGTAGATATGTGAGGATATCTTGTTTGCGTGGAAAC CCTATTGCTATATTCTTTGTTCAGGTATGCTATAATTGTTTTACCTTTCTGCTCTTCGCCATTTGTTATTATTCTAATCT TATATTCTACATAATTGTTAAGAAGTTTTTTTGTTTTTATTAGCCTTAGGCTATTAGGTTAAATAGATAGTAGGATGTTT ATTTTTTTAGCAGTATCACACTTCTTAATAAGAACCTTGATGGTAGACGTCTAAATCTTTTCTACATGTGCTGTTATATT TCTTAATTTTGTGTGTTTGGTTGGATATCATTTATGACATTTTAAAAGGTAATGTGTGTAGACATTAATTGGGTCGTTTG GTAAGGGAATGTCCTATCTACATTCTATAATTGATCTCTTGTTCCTTTTTTGAATAAAAGATGAAATCACTAAAAGGACT GAGAAAGAGTTTAAAGGGAAGGAGAATAATATATTGTACATTAAGAAAGCTACTAAACAAGCATGTTCATTGTTTAATAC AAAGACCAAAAAATAATAGGGCTTCACATTCCGTTGGCATGTCTACCTCTACATTTATTAGTCTTATAGAACTTCTGTTT TTCTGTCTTTTTTTTGGTTTTCTTTATCTAGTCTAAGGATTCCTTTTCCTGTAGTCTTTACTGTTTTCTCTTTCTATTTC TAATACAAATTTATATAGAAGAAGGTTCCAAATGTTTGTCACTTGTCATTACTGAGCTTGTTTTCCTATCCTCTCTTGCA GCTAATTGGAGTTTCTGTGGCTGGTCTTGAACCTGAATTTCAACCGGTTGTTAATTACTTGCTGCCACATATTCTATCTC ACAAACAAGATTCTAATGATATGCATCTTCAGGTGGATTTCATCTGTACTGCCATCAAAGTGCTTATTATGTCATTTGTG TTTGTATTATTTTTACTATTTGTTTTTCCTTTCTGATGTTTTGTTTATAGTTACTGCAAGACATGACAAACCGGTTGCAT GTATTTCTTCCACAACTAGAGGTAAACTTGAGCATTTTAATTTCATGATTTTTTTCACAATTTCACCTTATTTTTCCATA CTTTTGTTATGCCATTCAGCATTGTATATAAAACTGCAGACAGACCTTGCCAGCTTTCCAGATAATCCTGAATCTAATCT GCGATTTCTTGCCATGCTTGCTGGTCCTTTTTATCCTATTCTTCATGTGGTGAATGAAAGGTTAGTGTACCTTTTATACT CTAGTCACCGTTCAATTATATGTCACTGGTGGTTAGTTTTATTTGGTTCATAGTATGTGATCTTGGTTTTCTATTCTTAA TTAATGAGATGTGTGTTTTTTGACGTTTGAAAATGATTTTTTTGATATACACAAAGCATAATGAGTGAAGGTGCTGGTCC TTCTGTTTTCTATAAGTCATTGTCAAGATGTGGAAAATAGTGATACCTCTGTAGTTTCTTTCTTGTCGATATAAATTGCA TTCAAAGTTTTTCTTTCAGTAATTGTATCTAAAGCTCTTGCATAGATTATTCACTATTCATTGTTCTAAAACATTCTGGA GCCTCAATATAACGATATTATGACACATGGGTAACATGTTGGTTGCATCATATTTTATTCTGTTGAGATATTGTCCCGTT TGCATCAGATTTTATTCGTTATTATCTTATTGGTATAGTTTGCCTATTTAGTTGATTGTGTAATCCCTAATTTCTAGGGA TTGACTAGGATCAGGAAACTTGGTATTAAATATTGTACTTCTAAATCATGTTAATGTCAATAAATTATTCCGAATACTTT CAGTTCAAAGTCCAAATTTCCCTTGAAGTTCGGAGTTACTTTTGCAAGCTACTGCTGTACAAGTTTTATTTATCCATGTG TGTGGATATTTTCTGTTTTTTCTATTTGCTTTAATATGTATGATAATTTGTGTAATTACAGAACATCTTCAAGGACTCCA GGCAATACAACTGACCTTGATGTCTCCAAAAGTAGTCAACTCTCACCGGCTCTAACTGTTTCCTCTAACTTTGAGGTAGC TCCACATTGATATACTTCTCCTGATATATAGCTCCACATTGATATACTTCTCCTGCTATATTGTCATCTTGCCTTACTGA CAGCGTGATTATTATTTGCACCACCCCGTGGTTTACCGGTGTTTGATTTTCACGGAATAAGTTTGTCGGTTTGCGTGCCA AAATTGATTACTGCATGGTGTTTATAATCCTCACTTTCTTCAAGGCCCATTTTTTCTTCTTTTTTCTCAACAAGAAAATA AATTTAATTAAACAGGAGAAAGGAAGTTCTGGAGCAGAGGATATGGAGTTCTCCTAAAGGAGCAACCAAATAAAAAAAAA GAACAAAAGAAGAAGGAAAGCAAACCTGCCAAAGGGGGCTGTTCTCTCAATATGTGACAGAAAATCCATTTCAAACAGCC ACTAATTAATCACCTTAACGAAGCTATGGATGTCAGTTTATCCCGCAAAAGTGGTAATAGCAAAGAACTTCTGCTTGCAA ATTCCGACATATCTCCGCCCACCAATACTGCTGTAGACCTCACCTTAACTCCAGACACAACCCATAAAATGGCATACGAG GAAGGTGTTCCAAGCTCTCTGTACAAATCGTGTTTTATCCAAAATTATTTGAAACTTAACAGCACAAATATCTAGCAACA ATAACAACAACAAAAGCCTTGTCCTACTAAGTGAGGTCGGCTATATGAATCACCCTATGCCATTGCGCTCGATAAAAAAT GCACAAATATCCAGACAACAGAAAAATAAAATTCTTACACATGAAAAAAATACAGAAAAAATATTAGGAGTATATGAGCT TTGTGGAGTCTACAAAGCAGGAGCAAATTATTAATTCTAATGTTCCTTACAGTTTGTTTGATTGGGTAGAGGAGGGGCAA TGTTGAAGGTGGATTGTTTCTCAGTTGATATAGGAAATGACTTTCATTTTCTCACTTCATATTTGTTTTGACATCTGAAT TCCATCAATATTCTTTGCACTTCTATTTGCTTTATATTACATAGCTTTGCCTGTATACACTATTAAATTATAGCCAGCTG TATGACTCAACAACTCCTCAGCTCCCCCCTCAACATATTTTTTTTAAATGCAGCCCAGGAGATCACGGAGTTCGTCCCCT TTCATTTCGTCTGCATATCGTGCCATAGTTTTTCGGCCAGATGCAATTTTTGTGCTGCTGAGAAAGGCATATAAAGATTC TGATCTGGGCTCTGTTTGTAGGATGGTATGTATCACTTATTTAGTTCAGTTAAATAAATATCCTTTTTACTTTTGACTTA CAGGATAAGTGCATTTTTCCCCTTTTTTCTATCTGTGATCGTCCTGTTGTTGCTCATGGAATTATCTGGGTATATCTTGC CCTTTATTTCAGGCATCTACAATTATGCAGAAGCTCATAAATCCTGATACTGAGCAAGATGTATCAAACCCTCAGAATGA ATTTATTTTTCTTTCGGAAGACAAATCAAAGTCAGAACTGTCTAGTCCTTTATCTTTAGTTGATTATTCAAACCTGTTTG GTGAGGATTTCCGAATCCCAGATGAGCAATGGGATTGCAGTTATCTTAATATAGTAGATACTGGGGCAGTGGAAGAAGGG ATCTTACATGTTGTTTATTCTTGTGCATCCCAGGTTCCTTATTGTAACAAGTTATATACTTCATTGATGTATATTTTATT TCAAAATTTGGAGTCTTTTATGTACATTGTTTAACACACTTCAGTTTGCAGCCTGTTCATTGCAGCAGGATGGCTGAGAG AACTTCAGACTTTTGGGCTGCACTGCCTCTTGTACAAGCTCTACTGCCAGGTTTAATTTTAGTAATAAATCACTCTTCGG TTCAGTAACAGGGTCATGACATAATGATTAATGAAGCCATTTTGGGCACAACTCTGATGTCTGAAATACTGAAAAGTTTT GAATTTGAAATCTCCTGCTTCCCCTTTATTTGTTCCTATATAATAGAAGCAAATAATGGTTTTTGCAAATTAGGAAGAAA CATAAAATAGCATGTTTTAACTGTTCCAGATAAAGGGTGGGGGTAAGGTGCAGGAGGTGATAGAATAGAAATTTTGTGTT TAAAATACTTATGCTTGTGGGAAAAGTGAAAAACACTAGGTTTTTGTTATTTAAAATACCCATGTGAATTTTAAACAGAA CTCCAAGTAATTAAAACGCATGAGCTATGTATGTATACTTCTTATCTCCTAATCATGAATATTAAATGGAAGAACATGAC CTAAAAATTAATCAATACATCAATTCCTGTATTAATGAAATCAACTTAAAACATTGAAAAATCCTTAATATGTTATTTAT TTTATTTATGAAGAATAAGATAGGAGAGCAGTAGAGTGCATGGGGATCAACAATCCTCTTAAAATAGAAAACAAAACAAA GGAAAGTAAAGAAAAATAGAAACCCCAGTCGTTCGTGTTTGGGATGAAGAAACATCATAGCTAACCAAACTAATAATAAA TATACTTGGCATTTTGGTATTTGGAATCCTTTTGTGCGATTAGTTCCTTTCATCTCTCACCTTTAAGTAATTGAAGGATT TGGTCGCTAGATTCCTTTAAATGAGAAGTTTATTTCTCAAAATCATATGTCTGTTCCATTCCCATTCTCCAAACAATGGC GATTTTGATAGAACTGGTACCAATAGAGAAGAAAAATTGATTTTGTTCAGGAGACCCTAACTTCCCAATCTGCTCCAATG TAGACACAGATTCAGAGCAGCACAGAGAAATGAATACAACAGCTGAGTACATTGAGAGCCTCTGCTTTTCTCCCAAACTC GAATTTTACAATTTTGATGCCTCTAGCAATCTCTCTCTCCCTTTTATTCAACTAACACCCAAACCTTTTTCCTGTAACCA CTAGGTAACTGTCATTCTCCTATTTAGTTTTACAATAACTATCCAATTAAGGGTAAGTTCTCATACAAAGGAACTCATCA CCTCTAATATACTGTGATGATGCCGATCTAAAATGCACAGTACAGAGAATAGTCTGTTGTGTTAGTTTCAACATATTACA ACTGACAGCAGTTTACCAACTATACACAGTATTCCATAGCAGTTTGAGTTTGACTAACTTATAGTTCTGCAAGTATCTCT AATACAATGATATGGGAACATCAATAAAATATCACATTTGTGAATGTACTAGGTTTAGTTCATTCTGAATGAAACTACCA TAAATGCTTTTATTAAAACTGCTTCCTTCAATTTTTGATTTTTTTCTGGCGCGTTTTTTGGTAGCTCTACGCCCATGGGT GAGCAATTCTTTTGATGTTGTGGATGAAACTTTTTCTCAGTGGAATCAGCCTATTGTACAACAAGCCTTCTCCCAGGTTT TATTCAAGGAGTTTTTATAGACCCAACTGATGTTCTTTGTGACTTCTCCAAACTGTTGTCCTGATTTTGTCATATGTGCA GATTGTTACTACAGCAACATCAGCTACCTATCGCTCACTTCTTTATTCTTGTGCTGGTTATCTGTCTTCATATTCTCCAT CTCATGTAAGTCAAACTAGCTTTTTCTTAATTTTAAACTAGAACCTGAGCTTTCTCGTCTGTATTCTATGGTCTTCTGCT TGATTTGTAAGCTGTATAATTATATCTCATCAGTTTAGACGTTGGATAAAGTTTCTATTGATTAAAGAAATACTAAAGCC AGAGCTTGTCAATTGAGGACTGAGCTTCGCACAACTACACTTTGCACACTCTACATGTTTTGTTTCTTTTCTATTGAGTA TTACAGATTTGGCCCTAGGTTACAATGCTGCACCAGATTTCAACTAATACTATTTATATAATATTTTGTTCAAATACTAA AACTATTAATACAAACTGAAGGCTACTAACAGACTAACATTAAGACAGAACTTGATTAAGGAATCGAGACATAAGTTATA AAATAATCTAAAGATTTTCTTATTATTTTGTTACATTAATTATTATATCTGATCAAATTACAAGTATTATACTCCCTCCA TCCCTAACTATAAGAACCTCCTAAGACAATTACGCTTATTAAGAAAACATGTAATGTTTTTAATTAAGTATTGGTTTTAA AAATGTTTATACAATCTTCTAGATTTACCCTTAGTTAATGTATTGAGTAGTGTGGAAAAGCATTAATTACTAGTTCTAAT CAAAATTTTGGAATTACAAAAGTGTAAAAAATACAAGAGGTCATGATAAGGGTCTTATAATTTGGGGACAAAGGGAGTAA ATATCTAACCATTCTTAGGCTTCCATCTAAAAGCATAAACTTTTGTGGTATTTGATATTTAACATGATATCCAAGCCTGT AAGTTCAATTGGTTAGGAGTCAAATTTTTGCTGCTTTGATTCTTCATAATTTAGTTGAATTTCTACATAAAATGGGTTTA ACCTAAAAAAAGGCTCTTGCATGAGGGGGAGTATGAAACCAAAGTTGAAGCTTTAGGAGAGTTGTTCCTGGTCAACAAGG ACCTGTTCTAAAGGAATCTGTTCCGTTTCCATTTTCTATTCTTGGTTATACTTAAAAAATTCTACATTGTTTTTACTTTT TTTTGGTTTTCAATTATTTGTATATGTAATGCTAAACTAAAAAAAAAAAATATAAACTGGATAGATTTATCCATTATAAT ATTAACAATTTATAAATATAGAGTCACCTACTTGACCGAATTTCAGGTTCTAAAGTTTACCTTTTCTGGGTTAGCAGCTG ATTTGACCTTAACTTTTTTATAGGCTAGGGCTGCTTGTGTGCTGATTGATCTGTGCTCTGGTGTTCTAGCACCTTGGATT ACTCAGGTGATAGCAAAGGTATGTTTGAATTTTGAACCTGATTCCACAAATTATTAGATATTTTCTGGATATTGTTGTTC TTACAATTTTTTCCCCTATTGTATTTTTATTATTATCATCACCTTCAGAATACCTAAATATGGATTTGCTAATTGTGTTT CCACATCA
CDS sequence (LotjaGi3g1v0074200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGGAGTTGGAGCCTCGCGTGAAGGCTCTTCCGTTCAAGGTCAAAGCCATGTCCAGGGAATCGCCGTCGCAGAA AGCCCTCCATGTCCTCGACACCGACCTCCGTTCTCACTGGTCCACCGCCACCAACACCAAGGAATGGATACTCCTCGAAC TCAACGAGCCGTGTCTATTGTCGCATATTCGGATTCATAACAAGTCTGTGCTTGAGTGGGAGATTGCAGTTGGTTTACGG TACAAGCCAGAGACATTCCAAAAAGTTCGCCCACGTTGTGAAGCGCCTAGACGTGATATGATCTACCCTATAAATTACAC TCCATGTAGATATGTGAGGATATCTTGTTTGCGTGGAAACCCTATTGCTATATTCTTTGTTCAGCTAATTGGAGTTTCTG TGGCTGGTCTTGAACCTGAATTTCAACCGGTTGTTAATTACTTGCTGCCACATATTCTATCTCACAAACAAGATTCTAAT GATATGCATCTTCAGTTACTGCAAGACATGACAAACCGGTTGCATGTATTTCTTCCACAACTAGAGACAGACCTTGCCAG CTTTCCAGATAATCCTGAATCTAATCTGCGATTTCTTGCCATGCTTGCTGGTCCTTTTTATCCTATTCTTCATGTGGTGA ATGAAAGAACATCTTCAAGGACTCCAGGCAATACAACTGACCTTGATGTCTCCAAAAGTAGTCAACTCTCACCGGCTCTA ACTGTTTCCTCTAACTTTGAGCCCAGGAGATCACGGAGTTCGTCCCCTTTCATTTCGTCTGCATATCGTGCCATAGTTTT TCGGCCAGATGCAATTTTTGTGCTGCTGAGAAAGGCATATAAAGATTCTGATCTGGGCTCTGTTTGTAGGATGGCATCTA CAATTATGCAGAAGCTCATAAATCCTGATACTGAGCAAGATGTATCAAACCCTCAGAATGAATTTATTTTTCTTTCGGAA GACAAATCAAAGTCAGAACTGTCTAGTCCTTTATCTTTAGTTGATTATTCAAACCTGTTTGGTGAGGATTTCCGAATCCC AGATGAGCAATGGGATTGCAGTTATCTTAATATAGTAGATACTGGGGCAGTGGAAGAAGGGATCTTACATGTTGTTTATT CTTGTGCATCCCAGCCTGTTCATTGCAGCAGGATGGCTGAGAGAACTTCAGACTTTTGGGCTGCACTGCCTCTTGTACAA GCTCTACTGCCAGCTCTACGCCCATGGGTGAGCAATTCTTTTGATGTTGTGGATGAAACTTTTTCTCAGTGGAATCAGCC TATTGTACAACAAGCCTTCTCCCAGATTGTTACTACAGCAACATCAGCTACCTATCGCTCACTTCTTTATTCTTGTGCTG GTTATCTGTCTTCATATTCTCCATCTCATGCTAGGGCTGCTTGTGTGCTGATTGATCTGTGCTCTGGTGTTCTAGCACCT TGGATTACTCAGGTGATAGCAAAGAATACCTAA
Protein sequence (LotjaGi3g1v0074200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVELEPRVKALPFKVKAMSRESPSQKALHVLDTDLRSHWSTATNTKEWILLELNEPCLLSHIRIHNKSVLEWEIAVGLR YKPETFQKVRPRCEAPRRDMIYPINYTPCRYVRISCLRGNPIAIFFVQLIGVSVAGLEPEFQPVVNYLLPHILSHKQDSN DMHLQLLQDMTNRLHVFLPQLETDLASFPDNPESNLRFLAMLAGPFYPILHVVNERTSSRTPGNTTDLDVSKSSQLSPAL TVSSNFEPRRSRSSSPFISSAYRAIVFRPDAIFVLLRKAYKDSDLGSVCRMASTIMQKLINPDTEQDVSNPQNEFIFLSE DKSKSELSSPLSLVDYSNLFGEDFRIPDEQWDCSYLNIVDTGAVEEGILHVVYSCASQPVHCSRMAERTSDFWAALPLVQ ALLPALRPWVSNSFDVVDETFSQWNQPIVQQAFSQIVTTATSATYRSLLYSCAGYLSSYSPSHARAACVLIDLCSGVLAP WITQVIAKNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 488 | 485 | 1.0E-283 | – | |
| Gene3D | 8 | 138 | 131 | 9.2E-12 | ||
| SUPERFAMILY | 13 | 134 | 122 | 2.09E-8 | ||
| MobiDBLite | 217 | 236 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0074200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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