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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0078500 |
| Transcript ID | LotjaGi3g1v0078500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FRS (FAR1 Related Sequences) transcription factor family; TAIR: AT4G27380.1 hypothetical protein; Swiss-Prot: sp|P80884|ANAN_ANACO Ananain; TrEMBL-Plants: tr|A0A0L9ULU8|A0A0L9ULU8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8643249..8645747) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAAAAACAGGAACAACAAGAAGAAGAGAAACGACGTCGTTTCTATGGATACCACCGACCCATCTGTTTCGGAACC ACCTCAAGGTAATCGCTTCACAACTACAATGTTTTTTTGTTTTTTATTTCAACTTTTGGTGACTGGGACTTGTTTACTTG AAGCAATGGATACTTCAGAATCAGGTGCTGCTAGTGCTACTACCAATATGTAAGTAACCCTAAATCCCTCATAGGCATCA CAGATAGATAGATATACTAAAGTTCACATATGCCCCGATTGGGAAAACAGCTTAATTAAGCGCTTATGGCAAAGATGGAT AGCTTTGGAAATCAATTTTTGAAAAAAATTAATAATCTTCCGTCTGAAGACTGTTGAATATGGATGTCACAAATAATCAA ACCTGACTAGGTTACCTAGCAGTAGGAGAGGCGCCCTTGATTTGGTTATCATTACAATAAAAGCAGGACTTTCAAGTGCA GTTGGTGTGTTAATTGGTGATATAAAAGACCATTTTAAAGATGAAAAATTTATAAGTTTTAGAAGAAAATCATTGAATAC TGATAAGATGAAAAGATTATTACCTGAAAGATTAGGTAATCTCGTCTGGAGGGTTTGCCGGAGGAAACTTAGTCGAAACA CCAGGCCTTAGAATTCCTTAGAATCTTGTCTAGGTGAGAAGCAGGAGAATATTTTCCTTTGTAAATAACTGACTGTTTTG GGAGGGAAGTCTGATAGTATTAGTTAGTTAGTCGAGGGTTAGCCTATAAATAAGAGTGGGTTAGAGAGGATTAGTCATCT TGGAGATCATTTGAGAATTGAGATTGGGAGAGTGGCCGAGACTCTCAAATATCTCAGCAACCGTTTGTACATTTCTCTAC TCAATAATATCTGGGTTCTATCAAAGTCTTTTAATTAACAGATTATTAGTTAAAACTGCTAGTTAGATGCTGTGTATAAA TAAGTCAGTCAGTAGAGTAAGAAGTCACTTTTAGATTTGGGCAATTGTGGAGTAGTCTGAGCTTCTTAGAATTCTCTCAT CACTTCCTTACTCTCTTTGTAATTCTCCTCCGTGTTCTAAGTCTATCCTACATTGGGAAGGCTTGGTAACTAGGATTCTC GAATAAAAATTCAGTTCGTTCAATTCTGACTGGTGCCAGTTCCTACCGAAGACAGTCAGTAGTTACGAAGGAAAAAGTCT CCTACCTCTCACCTAGACCTCCTCTGATACAATTTACTAATTACTAATAGGAGGTCATACATTTCTATCAACGACCATCA AGGCCCGGCAACACTGACAGTGAAAGCTTTGCCGGCCTTCCAAAGACCCTTTGCTCTGTCGTTGAAGGCCCATCTCTGGT TGGAACTTCGGGAGCACCGCCTTGTTAGACATGAGGATAGACCTGTTGTCACTAAAGTCTATCAAAGAAGGGGAAAAGAA AGGGTTAGTTAGACTTTGCCATGTGGCAGTTAGGTTGTTATATCTGTTAGTGGGGAAAACAGTTAGAAAAGGGAATATAA ATAGGAATTAGAGCTGTCAGTTAGAATTAGAATTGGGACTCTCGAAATTCCCAGTATTGTACTATTTCTTAATTCCAATT GGGATTAGGGTTCTTGAATAACACAATTGGTATTCTGATTCTGCTTGAGTCTATCACGCCTTCACAAACTCCCACGGTGT TGCTTTCCTATTGCTTCTTTGCCAGCAAAACCATCAAATGAGAGCATTGGGTACCAATTCTTTCTATGCCTTTGATAAAA GCTTTTTTTCCTGTACTATACTCACAGCTTCAAAATGTTGCTCCACGTTGATGAGCCACCCATAAGCTTTTCTTCCGTCT AATGTTGGAATGATCTTCAAGAACAATCACCCACAGCTCCAAGATCAGAGCGCTTATATCAATTGATAGGTACCAGCTGT GAATTAGAAGAAAAATTATAATTATTCAAGAATAGTAATGAGCTACAATTACTGATTATTTGAGAGAACCAACACTCCCT CGCGTTTTCTTATTACAAACAAGATACCCTCCAATTCCCCTCATCCTCTTATTTATAGTCTCATCTAATTGACCCCTTTG TAACTAACTGACTAACTAAGTAACTAACTCTCTTAGTCACTAACGGTTATCTATCAGACGAACACATTGTCCTGCTTCAT TGTATCCATTTATTTGCTTAAACTCTCATCTTTCACTTGTTAGCCCCGAATTGTTGTTAAAACATAAAATTACTCTCTGA ATGATCAAGTCAGCATTCTATTTGCTTTTTCAAATACATGTGCCTGCTCTCTTAATGTTTACTTGTTCTAAACTTCTTCC TCTAATTATGAAACAGGAAGATGAAGCTGAAGGGAAGGCCGATGAAGAGAACAAAAAATGTTCGAAAGAAGAAGGCAATA GCTAAAGCCATATCCGCACACGAGAAGTCTTCGGAGAAAATATCAAAGCATGAAAACAAAAAAAGTAGAGTTCAGTCTGC CAAAACACTCTATGAATGA
CDS sequence (LotjaGi3g1v0078500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAAAACAGGAACAACAAGAAGAAGAGAAACGACGTCGTTTCTATGGATACCACCGACCCATCTGTTTCGGAACC ACCTCAAGCAATGGATACTTCAGAATCAGGTGCTGCTAGTGCTACTACCAATATGAAGATGAAGCTGAAGGGAAGGCCGA TGAAGAGAACAAAAAATGTTCGAAAGAAGAAGGCAATAGCTAAAGCCATATCCGCACACGAGAAGTCTTCGGAGAAAATA TCAAAGCATGAAAACAAAAAAAGTAGAGTTCAGTCTGCCAAAACACTCTATGAATGA
Protein sequence (LotjaGi3g1v0078500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKNRNNKKKRNDVVSMDTTDPSVSEPPQAMDTSESGAASATTNMKMKLKGRPMKRTKNVRKKKAIAKAISAHEKSSEKI SKHENKKSRVQSAKTLYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 98 | 98 | - | – | |
| PANTHER | 1 | 98 | 98 | 2.3E-34 | – | |
| MobiDBLite | 17 | 43 | 27 | - | – | |
| MobiDBLite | 49 | 66 | 18 | - | – | |
| MobiDBLite | 67 | 91 | 25 | - | – | |
| Coils | 90 | 98 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0078500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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