Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi3g1v0095300 |
Transcript ID | LotjaGi3g1v0095300.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Beta-glucosidase, putative; TAIR: AT5G54570.1 beta glucosidase 41; Swiss-Prot: sp|Q9FIU7|BGL41_ARATH Putative beta-glucosidase 41; TrEMBL-Plants: tr|A0A151RKV2|A0A151RKV2_CAJCA Beta-glucosidase 6; Found in the gene: LotjaGi3g1v0095300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:11870030..11873370) extracted from Lotus japonicus Gifu genome v1.2.
AATAAGCACCGTCTCAGAAATGAATATTAGAGAATACTATATGATATTGATTACTAAGCGTGTAAGGAGTTTGCAAATGA TCTTTTTACTATATAGTACGGTGATTTTTTGTATTTATGCATATACAATAATAACTGCACCATAACTTTTTCCATTGACA TCATTATTTTTATAAAATTATGTTGATGTGATTTCAGTTTTGGTTTTTTCCTTTTTCTTTTTTTATCTTCAGTCGTTTGT CATAACATTACACAAAATATAAACAGTCAATTAAAGGAGATACAAATTCCATTTTGTGCAGAATGATATAAACTTAATGA AGGATTTGGGAATGGATTCCTACAGATTTTCCATATCATGGCCTAGAATTTTCCCAAGTAAGTTGTAGTATTTTCAAATC CTTTTAATTTTTGTGTAATTTAGTGTATGTTTGAAAATTCTTCTACGGTTCATTTTAAAGCCAAAATCAATCAATTTTGG AGAGAAGTTACTATGATAGCATGTTTGGATCAGTTTTTATTTCTTACAAATCAATTTAGATACTTAAAAAGTTACTTACA TAAGCTTCTCCTCAAAAATGATTTTGACTCTAGAATCATGGTAGAAGAATTTCCATACATGCACCAAGTAGCTTCTCGTT GTCAGAATTGATTTTGATGAAAGATAAGTAAATCAAAACATGTTAGTAGTCTATTTTAATGCTAACTGTATTTGTAACAA CTTAACAGATGGAACAGGGGAACCCAATACAGAGGGAATAAAATATTACAACAGCCTCATTGATGCTTTACTGGAAAAAG GTTACTTGAGAATTTATTCTGGAAATTTGACCTTAGTATAGCAAAAAAAAATACCAATAGGATTAAAATTTTAGCTCTTC TTTCCAATCAGGAATACAACCTTTTGTGACTCTATATCATTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGAT GGTTAAGCACACAAATCATGTAAGTAAATAAAATGCTATTGATCTTTTGAGACAAATGGTTGAATTGAGCTTCATGTTCT GTTCACTTGCAGAAAAGATTTCGAGCACTATGCCTATACCTGCTTCGAAGCTTTTGGCGACAGAGTCAAGCACTGGATTA CCTTCAATGAACCTCATAACTTTGCTCTCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTCTGGGT CATCTTGTGTGCAAGAAGGGAAAATCATCCACTGAACCATACATTGTTGCTCATAACATTCTCTTATCCCACGCTGCTGC CTATAGAAGTTACCAACAACATTTCAAGGTTTCAAAAGATTATCTTCACAACTCATACATAAACAAAAATTCCTGTAATT GCATGTTTGGACATTCTTCTACAATTGATTCTAAAATCAGAATCAATTCTGTGAAGAAGCTTATGTGGTTAGCTTTTTGG TTTCAGAATTGATTCTGAGTAAAGAGAAGCTGATGCAAACATGTTATAAGCAGTCTTAAAGAAGCTGAAGATATCAATAG TAATATTGTTATGTGATGGTTAATTCAGGAACAACAAGGAGGTCAAATAGGGATAGCACTAGATGCAGTTTGGTATGAAC CCATAACTGAACTTGATGAAGATAAAGATGCAGCAGCAAGAGCTATGGACTTTTCACTTGGATGGTAATTGGTAACCTTT CTAACTTTAGTATAATGATTAGGGTTTTCAATTGCGGCCGCGGTTGAAGTTGTGGCTATGTTGCGGAAATGTGAACAAAA GTGGGTCGAATCAGTTGCAATTGCAGTCGCGATGCTCTTGCATAGATTTCAAAACCCATTACATTGCGGCCTCAATTTAG AACCCTTGATCATCATAAAAGTTAATAACTTGTGACAAACAGGAAGATCTTATCTTCCACCTAAAAGATGTGTAACAACA CTAATGTGAATCAGGTTCCTTGACCCACTTATCTTTGGAAAATATCCTCTCTCAATGAAAAATCTTGTGGGTGAGAGATT GCCAGAGATTTCTGAAACAACCTCAGACTTGCTTGTGGGATCTTCAGATTTTATTGGCATAAATCACTATACCTCAGTGT ATACTCGTAATGACAGGACTCGAATTCATAAACTGATTATGCAGGATGCTGCATCTGATGCTGCTGTCATCACAACCGGT GAGCTATTAATGCAAATTGTGAAACTCTTTTATTCTTTGCCTTAAACACATAACTGAAGCTGAATGAAGTTTCTCATGTT TCCTCTTTTTCTGCATCCTAGCATACAGAAGAGGATCTGCAATTGGAGAAAGGGTATGCTCAGAAAACCACTAATGCTAG AATGCACATGTACATTTCATGCTAAATCAACAAAAAATTCTTCTTTTTCAGGCAGCTTCACATTGGCTTCACATTGTTCC ATGGGGCATCAGAAAGTTGGTAAAATATGTGAAAAGCAAATATGGGAACACACCAGTAATTATTACAGAGAATGGTGAGT AGTTTTGTGGTTGCAAAGCTAATCATAATGTATGTTTGAAAATCCCTCTATAGTGGATTCTAAGGCCTAAATCAAGCCCT CTATAATTATTCTGATAGCATAAAATCAATTCTGGATGAGAATATAAATGTTTAGGAAAATCTTTGGAGGATTGATTTCA ACCCCTAAATCAATTCTGTTGTAAGCTAGAGAGAGTTGTTTATGCGCTGAACATAATCAATTTTGAGATTTTACAGCAGA ATTTCACAGCATTACCACGTTTCTCGTGGAGGTATCCGGTCATAAATGTGCACATATCACTTTCAAGTTTCAAGTTCAAC TCAATTTTACCAAAATCAATTTTAGACAACACTAATCCAAACACGCACTGAGCAGCTTCTAGATGTCAGAATTGATTCTA ACGCAAGCATAGTTTTTGTAACATAAGATTTCTGATGGCAGGAATGGATGACCCAGGCAGACCCTTTATGACCTTAGAAA AGGCATTAAAAGATGACAAGAGGATAAGATACCATAGAGACTATCTCTCTAACCTATCTGCTGCTATAAGGTATTATTGT TGCAAGTCCTTGAATTCCTTCTATTGCAAAACCTTGCATCTAGGTTTTGCAACATAACTTTGTTGCATGCTTTCTTAATC ATGAGATAACATGATTTCAATGCAGGCAAGATGATTGCAACGTACGTGGTTACTTTGTGTGGTCATTGCTTGACAATTGG GAGTGGAACTTGGGATATACTGTACGGTTTGGACTCTACTATGTGGATTATAGTAACAATCTTACTAGGATACCAAAAGC TTCGGCGCAATGGTTCAAGAACATACTCAGTTTTGAAGCAGAGAACAGGAGTGAAATTTGA
CDS sequence (LotjaGi3g1v0095300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGATTTGGGAATGGATTCCTACAGATTTTCCATATCATGGCCTAGAATTTTCCCAAATGGAACAGGGGAACCCAA TACAGAGGGAATAAAATATTACAACAGCCTCATTGATGCTTTACTGGAAAAAGGAATACAACCTTTTGTGACTCTATATC ATTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGATGGTTAAGCACACAAATCATAAAAGATTTCGAGCACTAT GCCTATACCTGCTTCGAAGCTTTTGGCGACAGAGTCAAGCACTGGATTACCTTCAATGAACCTCATAACTTTGCTCTCCA TGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTCTGGGTCATCTTGTGTGCAAGAAGGGAAAATCATCCA CTGAACCATACATTGTTGCTCATAACATTCTCTTATCCCACGCTGCTGCCTATAGAAGTTACCAACAACATTTCAAGGAA CAACAAGGAGGTCAAATAGGGATAGCACTAGATGCAGTTTGGTATGAACCCATAACTGAACTTGATGAAGATAAAGATGC AGCAGCAAGAGCTATGGACTTTTCACTTGGATGGTTCCTTGACCCACTTATCTTTGGAAAATATCCTCTCTCAATGAAAA ATCTTGTGGGTGAGAGATTGCCAGAGATTTCTGAAACAACCTCAGACTTGCTTGTGGGATCTTCAGATTTTATTGGCATA AATCACTATACCTCAGTGTATACTCGTAATGACAGGACTCGAATTCATAAACTGATTATGCAGGATGCTGCATCTGATGC TGCTGTCATCACAACCGCATACAGAAGAGGATCTGCAATTGGAGAAAGGGCAGCTTCACATTGGCTTCACATTGTTCCAT GGGGCATCAGAAAGTTGGTAAAATATGTGAAAAGCAAATATGGGAACACACCAGTAATTATTACAGAGAATGGAATGGAT GACCCAGGCAGACCCTTTATGACCTTAGAAAAGGCATTAAAAGATGACAAGAGGATAAGATACCATAGAGACTATCTCTC TAACCTATCTGCTGCTATAAGGCAAGATGATTGCAACGTACGTGGTTACTTTGTGTGGTCATTGCTTGACAATTGGGAGT GGAACTTGGGATATACTGTACGGTTTGGACTCTACTATGTGGATTATAGTAACAATCTTACTAGGATACCAAAAGCTTCG GCGCAATGGTTCAAGAACATACTCAGTTTTGAAGCAGAGAACAGGAGTGAAATTTGA
Protein sequence (LotjaGi3g1v0095300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKDLGMDSYRFSISWPRIFPNGTGEPNTEGIKYYNSLIDALLEKGIQPFVTLYHWDLPQMLEDKYEGWLSTQIIKDFEHY AYTCFEAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGHLVCKKGKSSTEPYIVAHNILLSHAAAYRSYQQHFKE QQGGQIGIALDAVWYEPITELDEDKDAAARAMDFSLGWFLDPLIFGKYPLSMKNLVGERLPEISETTSDLLVGSSDFIGI NHYTSVYTRNDRTRIHKLIMQDAASDAAVITTAYRRGSAIGERAASHWLHIVPWGIRKLVKYVKSKYGNTPVIITENGMD DPGRPFMTLEKALKDDKRIRYHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNLGYTVRFGLYYVDYSNNLTRIPKAS AQWFKNILSFEAENRSEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 409 | 409 | 8.4E-249 | – | |
PANTHER | 1 | 409 | 409 | 8.4E-249 | ||
Pfam | 1 | 409 | 409 | 5.7E-131 | ||
SUPERFAMILY | 1 | 408 | 408 | 9.22E-154 | ||
Gene3D | 1 | 409 | 409 | 1.5E-182 | – | |
PRINTS | 234 | 248 | 15 | 1.7E-21 | ||
PRINTS | 312 | 320 | 9 | 1.7E-21 | ||
PRINTS | 335 | 346 | 12 | 1.7E-21 | ||
PRINTS | 357 | 374 | 18 | 1.7E-21 | ||
PRINTS | 381 | 393 | 13 | 1.7E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0095300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…