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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0095300 |
| Transcript ID | LotjaGi3g1v0095300.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase, putative; TAIR: AT5G54570.1 beta glucosidase 41; Swiss-Prot: sp|Q9FIU7|BGL41_ARATH Putative beta-glucosidase 41; TrEMBL-Plants: tr|A0A151RKV2|A0A151RKV2_CAJCA Beta-glucosidase 6; Found in the gene: LotjaGi3g1v0095300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:11870462..11873370) extracted from Lotus japonicus Gifu genome v1.2.
GAAAATTCTTCTACGGTTCATTTTAAAGCCAAAATCAATCAATTTTGGAGAGAAGTTACTATGATAGCATGTTTGGATCA GTTTTTATTTCTTACAAATCAATTTAGATACTTAAAAAGTTACTTACATAAGCTTCTCCTCAAAAATGATTTTGACTCTA GAATCATGGTAGAAGAATTTCCATACATGCACCAAGTAGCTTCTCGTTGTCAGAATTGATTTTGATGAAAGATAAGTAAA TCAAAACATGTTAGTAGTCTATTTTAATGCTAACTGTATTTGTAACAACTTAACAGATGGAACAGGGGAACCCAATACAG AGGGAATAAAATATTACAACAGCCTCATTGATGCTTTACTGGAAAAAGGTTACTTGAGAATTTATTCTGGAAATTTGACC TTAGTATAGCAAAAAAAAATACCAATAGGATTAAAATTTTAGCTCTTCTTTCCAATCAGGAATACAACCTTTTGTGACTC TATATCATTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGATGGTTAAGCACACAAATCATGTAAGTAAATAAA ATGCTATTGATCTTTTGAGACAAATGGTTGAATTGAGCTTCATGTTCTGTTCACTTGCAGAAAAGATTTCGAGCACTATG CCTATACCTGCTTCGAAGCTTTTGGCGACAGAGTCAAGCACTGGATTACCTTCAATGAACCTCATAACTTTGCTCTCCAT GGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTCTGGGTCATCTTGTGTGCAAGAAGGGAAAATCATCCAC TGAACCATACATTGTTGCTCATAACATTCTCTTATCCCACGCTGCTGCCTATAGAAGTTACCAACAACATTTCAAGGTTT CAAAAGATTATCTTCACAACTCATACATAAACAAAAATTCCTGTAATTGCATGTTTGGACATTCTTCTACAATTGATTCT AAAATCAGAATCAATTCTGTGAAGAAGCTTATGTGGTTAGCTTTTTGGTTTCAGAATTGATTCTGAGTAAAGAGAAGCTG ATGCAAACATGTTATAAGCAGTCTTAAAGAAGCTGAAGATATCAATAGTAATATTGTTATGTGATGGTTAATTCAGGAAC AACAAGGAGGTCAAATAGGGATAGCACTAGATGCAGTTTGGTATGAACCCATAACTGAACTTGATGAAGATAAAGATGCA GCAGCAAGAGCTATGGACTTTTCACTTGGATGGTAATTGGTAACCTTTCTAACTTTAGTATAATGATTAGGGTTTTCAAT TGCGGCCGCGGTTGAAGTTGTGGCTATGTTGCGGAAATGTGAACAAAAGTGGGTCGAATCAGTTGCAATTGCAGTCGCGA TGCTCTTGCATAGATTTCAAAACCCATTACATTGCGGCCTCAATTTAGAACCCTTGATCATCATAAAAGTTAATAACTTG TGACAAACAGGAAGATCTTATCTTCCACCTAAAAGATGTGTAACAACACTAATGTGAATCAGGTTCCTTGACCCACTTAT CTTTGGAAAATATCCTCTCTCAATGAAAAATCTTGTGGGTGAGAGATTGCCAGAGATTTCTGAAACAACCTCAGACTTGC TTGTGGGATCTTCAGATTTTATTGGCATAAATCACTATACCTCAGTGTATACTCGTAATGACAGGACTCGAATTCATAAA CTGATTATGCAGGATGCTGCATCTGATGCTGCTGTCATCACAACCGGTGAGCTATTAATGCAAATTGTGAAACTCTTTTA TTCTTTGCCTTAAACACATAACTGAAGCTGAATGAAGTTTCTCATGTTTCCTCTTTTTCTGCATCCTAGCATACAGAAGA GGATCTGCAATTGGAGAAAGGGTATGCTCAGAAAACCACTAATGCTAGAATGCACATGTACATTTCATGCTAAATCAACA AAAAATTCTTCTTTTTCAGGCAGCTTCACATTGGCTTCACATTGTTCCATGGGGCATCAGAAAGTTGGTAAAATATGTGA AAAGCAAATATGGGAACACACCAGTAATTATTACAGAGAATGGTGAGTAGTTTTGTGGTTGCAAAGCTAATCATAATGTA TGTTTGAAAATCCCTCTATAGTGGATTCTAAGGCCTAAATCAAGCCCTCTATAATTATTCTGATAGCATAAAATCAATTC TGGATGAGAATATAAATGTTTAGGAAAATCTTTGGAGGATTGATTTCAACCCCTAAATCAATTCTGTTGTAAGCTAGAGA GAGTTGTTTATGCGCTGAACATAATCAATTTTGAGATTTTACAGCAGAATTTCACAGCATTACCACGTTTCTCGTGGAGG TATCCGGTCATAAATGTGCACATATCACTTTCAAGTTTCAAGTTCAACTCAATTTTACCAAAATCAATTTTAGACAACAC TAATCCAAACACGCACTGAGCAGCTTCTAGATGTCAGAATTGATTCTAACGCAAGCATAGTTTTTGTAACATAAGATTTC TGATGGCAGGAATGGATGACCCAGGCAGACCCTTTATGACCTTAGAAAAGGCATTAAAAGATGACAAGAGGATAAGATAC CATAGAGACTATCTCTCTAACCTATCTGCTGCTATAAGGTATTATTGTTGCAAGTCCTTGAATTCCTTCTATTGCAAAAC CTTGCATCTAGGTTTTGCAACATAACTTTGTTGCATGCTTTCTTAATCATGAGATAACATGATTTCAATGCAGGCAAGAT GATTGCAACGTACGTGGTTACTTTGTGTGGTCATTGCTTGACAATTGGGAGTGGAACTTGGGATATACTGTACGGTTTGG ACTCTACTATGTGGATTATAGTAACAATCTTACTAGGATACCAAAAGCTTCGGCGCAATGGTTCAAGAACATACTCAGTT TTGAAGCAGAGAACAGGAGTGAAATTTGA
CDS sequence (LotjaGi3g1v0095300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGAAGATAAATATGAAGGATGGTTAAGCACACAAATCATAAAAGATTTCGAGCACTATGCCTATACCTGCTTCGA AGCTTTTGGCGACAGAGTCAAGCACTGGATTACCTTCAATGAACCTCATAACTTTGCTCTCCATGGTTATGATTTAGGCA TTCAAGCACCAGGAAGATGTTCCCTTCTGGGTCATCTTGTGTGCAAGAAGGGAAAATCATCCACTGAACCATACATTGTT GCTCATAACATTCTCTTATCCCACGCTGCTGCCTATAGAAGTTACCAACAACATTTCAAGGAACAACAAGGAGGTCAAAT AGGGATAGCACTAGATGCAGTTTGGTATGAACCCATAACTGAACTTGATGAAGATAAAGATGCAGCAGCAAGAGCTATGG ACTTTTCACTTGGATGGTTCCTTGACCCACTTATCTTTGGAAAATATCCTCTCTCAATGAAAAATCTTGTGGGTGAGAGA TTGCCAGAGATTTCTGAAACAACCTCAGACTTGCTTGTGGGATCTTCAGATTTTATTGGCATAAATCACTATACCTCAGT GTATACTCGTAATGACAGGACTCGAATTCATAAACTGATTATGCAGGATGCTGCATCTGATGCTGCTGTCATCACAACCG CATACAGAAGAGGATCTGCAATTGGAGAAAGGGCAGCTTCACATTGGCTTCACATTGTTCCATGGGGCATCAGAAAGTTG GTAAAATATGTGAAAAGCAAATATGGGAACACACCAGTAATTATTACAGAGAATGGAATGGATGACCCAGGCAGACCCTT TATGACCTTAGAAAAGGCATTAAAAGATGACAAGAGGATAAGATACCATAGAGACTATCTCTCTAACCTATCTGCTGCTA TAAGGCAAGATGATTGCAACGTACGTGGTTACTTTGTGTGGTCATTGCTTGACAATTGGGAGTGGAACTTGGGATATACT GTACGGTTTGGACTCTACTATGTGGATTATAGTAACAATCTTACTAGGATACCAAAAGCTTCGGCGCAATGGTTCAAGAA CATACTCAGTTTTGAAGCAGAGAACAGGAGTGAAATTTGA
Protein sequence (LotjaGi3g1v0095300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEDKYEGWLSTQIIKDFEHYAYTCFEAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGHLVCKKGKSSTEPYIV AHNILLSHAAAYRSYQQHFKEQQGGQIGIALDAVWYEPITELDEDKDAAARAMDFSLGWFLDPLIFGKYPLSMKNLVGER LPEISETTSDLLVGSSDFIGINHYTSVYTRNDRTRIHKLIMQDAASDAAVITTAYRRGSAIGERAASHWLHIVPWGIRKL VKYVKSKYGNTPVIITENGMDDPGRPFMTLEKALKDDKRIRYHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNLGYT VRFGLYYVDYSNNLTRIPKASAQWFKNILSFEAENRSEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 350 | 350 | 3.6E-209 | – | |
| Gene3D | 1 | 350 | 350 | 4.8E-145 | – | |
| PANTHER | 1 | 350 | 350 | 3.6E-209 | ||
| SUPERFAMILY | 2 | 349 | 348 | 8.29E-120 | ||
| Pfam | 2 | 350 | 349 | 5.6E-94 | ||
| PRINTS | 175 | 189 | 15 | 8.9E-22 | ||
| PRINTS | 253 | 261 | 9 | 8.9E-22 | ||
| PRINTS | 276 | 287 | 12 | 8.9E-22 | ||
| PRINTS | 298 | 315 | 18 | 8.9E-22 | ||
| PRINTS | 322 | 334 | 13 | 8.9E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0095300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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