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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0099000 |
| Transcript ID | LotjaGi3g1v0099000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | QWRF motif protein (DUF566); TAIR: AT4G25190.2 QWRF motif protein (DUF566); Swiss-Prot: sp|Q1PE51|QWRF7_ARATH QWRF motif-containing protein 7; TrEMBL-Plants: tr|K7KYK0|K7KYK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0099000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12324286..12328936) extracted from Lotus japonicus Gifu genome v1.2.
AGACGAGACCCTTCCCGTTCAACATGCTGCATATACGTGCAAGCATTTTTCCATGATGTGTGGGGACAAGTATTCAACTT TAATTTCTAAGTATCCATCCAACGTGCTTTCAACTTCTAACTCTACAACCATGAAGTACATATAATCCAGTTTGAGCAAG ATCGATATTGATCAGTTTTTAATACATTAGCATTACCATTTTCTTTGAGTGTTATAAGATTTTCCACATTTGTCACTTAT TTTTAGTTCAACACAAAAGATTGTATAAACCAAACCATACACAAAATTATTATCCATGGAGAAATCTGCCCGCACTCTTT CCGGCCGCGGCCAACTCACGGTAGCGCCACCGTCGCCCTCGCCCATGCTTGTCCGCAGCCGAAGCGGGACTGGCCTTGCA GCTATAACCACCCCAGAGAGAAGAAATTCACAAAGGTTCAGCTCTAGTGAAAGATTCACCAACATCGTCCACCGTTCAAA ATCAACATCGAAATCAAGAACCAACAACAACGAAGGCAACATCAACATCAGTAAGTTCCAAGAGAAGACGAATAACGATG GTTTTGGTAAGTTTTTGCAACGTGGGGTTAGTCCTGATCATGATACCCCTAGAGCTTCAAGGAAGGCTACGTCGGCAATG AAGTCGCCTTCAGCGTGGGCCCTTTCACCCGGGAGGCCCCCTCCGTTCGGTTCTGATCCTCCGGCTAAAGCCATTGCGAA CGGAAGTGGTGGTGGCGGAGGTGGTGTTGGTAGTGGTCCTGTTAGTAAAGTCTTGAAGTACTTCAAGCAAAGGAAAGTGA CATCCCTGCAAGAAGAAATGTACCACCAATTCAGGATTTTGCATAACAGACTTTTGCAGTGGAGATTTATTAATGCTAGG GGTGAGGTTGCCATGGCTAATGTCAAGAATGTAGCCGAGGTATATGCTATTTCTATGTTCTCGTGTATTTTTAGTTTGAT GAAATATGTAGTGTTTGTTTGGTTTTCAGTTAGAAAATCCGTTTGAAGCATTCCAATTTGAGATCATGATTTTTAATGCA CATTCAGCCAATAGAATGCACTTGTTGGGTTGAATGCGCTTTCACATTCACCCAATTGAAAACCAAACATACTCGTAAAA AACTTATTAATCCATATATGACCTAGGTATTATTTTACAACTAACATTTAACATTATTTATGCACCTTATACCTTATGTG CTACAATTTATTTACAATATGCAACTTATGGAGAAAGTTTTCTTTAATTTTTTTCCTTCATAAAGGTTTTTGTGTCAGAT CAAGTTATTTTTTAGAGATTAATGGATATGCACTGTCAGTGTAAAGAAGTTTTACACTGACGTTCAATCACATTATGCCA CATAAGACTAAGTAGTTACAAATCTTTTTAATTTTAATTAGTAAATTAATAAATTGCTGATGTGGCGGAAATCAATTGGG TGCATGTGTAAAACAAGTTTACACTGTCAGTGCATCTCCTATTTTCTCTATTTTTTAATTATCAATATATTAAAATTTTA CTTTTCTCAAAATAGAATTTCATAAACTTGTATTTTTATATTTAATTGTCATTTTCTATTGTCAATTAATTAAGAAATTT CTATTATTGGTAGTTTGGTACCTAACTTCTCTATCTGCGCGACTTTCTCTTCTAATTAATTTTTCTTTTTGTGATTTCAG ATACGTTTGTTTTCGGTATGGCTTAGAAACCTCATGCTAAGGAAGATCATTATACAAAAGAGAACTGAATTGCAAAAAGT CAAACATAGGATCAAACTTTATCATATTCTGAATGGACAACTTTCCCTTCTTACTGAATGGGCAAAATTGGACAGAAGAA ATCAAGAATCAATAGGCAGATTAACAAGGAAGTTGTCAGCATTGTCCTCCGCATTGCCTTTAACTCACGGTGTCAAGGTA CATTTGTTTCCTTTCAATTACAATAGTAGTTATCTAAAGCAAATAATTAAAATAATTTATAAATATAATTCAACAATTAC GTGTTGGCCCTCTAAATAATAAAAGGAGTCGGTGAATATATGAGTTGGGAGGGAAGTCCAAGGATCAATCCTTAAGGGTG TAATTTATATTTTTTCAATGAAAAAAAAAATTCTTTTTATTTATTTAGGTAACTACTATTTTATATTCAATATAATTCAT CTTTGCTAACACTTTTCTTCCAATTCGATTCTCTTTACAGGCAGATCCAGAGTCTCTTTTTGAAGCTTTGAGCTCAGCAA TTGAAGTCATGGAAAATATTGAGTCGTTGATCACGAAATACCAGACACAGGTTTTTTACCACAAAAATACCAATTAATTA ACCCCATTCATCACATGCATCAAATCATCAAAACTATAGTCCATTTAATTTAATAAATTATAACTAAATAGTTACTTTAG TTTCAAAGATATGAATTATAAGATGCACTTTAATATTATTCTTATTAAACATGATAATTATTAAGATTTATGTAATTTCA GCAGGTTGAGAGGATTCTTTATCAAGTTACTGAACTAGCCACAACCTCAAAACAAGAAGAAGAGTATTTACAGGAACTTT TGGGGCTTGTTCCCATTATTGCTACTTTATTGGTGAGTCTTGCAATCTTCATTTCCACATTTATCTTTTTTTCTTATCAT ACTATTTGTTCGGACCTGAGAGAGAAAGAAGAGGTTGTGCCACTAGTCTACTAGGTTAAGTTGATTAAATGAGAAAATGA GTGACTATAGTTGGTACGTAGGTTAAATTTGATAGGCTTTTTTTTTTAACTATCCCTCAATAAGAACTGGGTTGGGCTAG TTTTTTCGTAATATTTTTCTTCGGTTGGTTTGATCGGGCTACAACCCAATCTGACACCGATAGATCAATTTCAATGAACT CATAAAATTAGACCAATCAAACCCTCAGCCGAACTGAATTAGCCCTTTCGATAAAAAGAAAACATGTCGGTTTGCTTGAA TTCAGTTCGATTCAACCCTTTTTAGACATCCTAACGGATACACTTGCAATTTTTTTACAATTACACAGTAATTAGTGCAT GCAAGTTACTTTTCCATCACATCAGTCATTGATTGGTGAACCAATTCTCTACTCTTCCAATGTGAATTCTGGACATTACC TTGACCTTGATAGTGTAATAGCTCTAATAGCCACTTTTTACCCTTCATGTAATAATGTATCTAACTCTAATTTTCACTCT TGTTATTCTTTTAGTGACGTGATGTGTAATTTTTTGAAGTACAATTACTCATAGAATGATACAATTATATATAGAAGTTC AATTATTTGTTTAAGTTTCATGCTCAAAGTAATTATGTAATTTTTTCTAATAGATACTAATCTCAATTTAATATCCTTAA TTGTAGGAGAATGAGAAAAATATTCAAGTGCATCTTATCCAAACGAGGACGAATACTAATAATGTGTTTGGATTGATGGC GGAGATATATTCTAAAGCACAATAACTCCACAAATTACACTTTATAGCTTCTCCTCAAAGAGATTATGAGGCTCACAATT GCAGAACCAAACAAACATATTAGAATACCGGCCACTATCCTTGCAACAATGCTCATTTGTGTATTTGAAGAATTCACATT GCATGTGTTCAACAAATCAATATTTTCTGACAATAGTATATAAGGGTGCATGTACTTAGTAGTGCAACAATTTTGTAATG AGTAAACCTCTATTTTTATTTTCAGTGACAGTCATATTTTTTATATTTGTATTTATACTAAAAAAGCAATGATAACGTGC CTTGCTCATTTTTAGTTGTTACGCTAGTAGCTAATGGATGACTAACACATGACGAACCAGCATGCAAGTTAAAAGTTCTT TGTATCTTTTTCCTTTTTAATTTGAAGATAGATTTGCATGGCTTGAGAAAATATATTATGTTCTATCTTCAGCTGACACT TCAAATATAATTAATGAAGCTTTTGGTCAAACAAATATGAGAAGGGGGAAACAAACGAATTGGACAATATTCTCCTATGC CTTTTTTAGACTTTTGATTAGATGTTGTGATTTTAAAATGTTTTGAAAATATTTTCTCCTCAAATGAATGTTTTTTCGGA AGCAAAAGTTTTGTTGAATTAAGGAGTCGAGAAATAAGTCATCTCGATTAAGGACAAAGCACAACGCTAACAAAGTAAGC AAATAATGAAAAATAACAATCCTTTCAAAGGAAACAATAAAAATGCAAAACCCTGCGAGTGTACTTGTCAATTGTTATTT CCACATATTGATCATGTGGTTGTGGCTTACGACAATGTCGTAGGAGGCTCAGAAATGTCAAGAGGAGATCAGACAATGAA ACAGATGAGATAGGATGAAGGGAGGGATATATGGTACCATCAACTATCACAAAATTGAAAACAGATAGGAACAAAATTGT GTGAAAATGAGGTGGAGAAAGTTTAGAGTGTGAATGTATCAGAACTCGTGCTGCGGAGAATATCTGCTGCACATAATCCA TTCTGCAATAAAAGATCAAAAAAGGAAGAGGAAGGAAGAGAAGAAGCAAAAGTGTGAGATATAATGTATTGTTTTTGGCA AAAAGTGTAGTCTATGGTTGATGGGTGAATAAAAGATCAAAAAAGGAAGAGGAAGGAAGAGAAGAAGCAAAAGTGTGAGA TAGAATGAATT
CDS sequence (LotjaGi3g1v0099000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAATCTGCCCGCACTCTTTCCGGCCGCGGCCAACTCACGGTAGCGCCACCGTCGCCCTCGCCCATGCTTGTCCG CAGCCGAAGCGGGACTGGCCTTGCAGCTATAACCACCCCAGAGAGAAGAAATTCACAAAGGTTCAGCTCTAGTGAAAGAT TCACCAACATCGTCCACCGTTCAAAATCAACATCGAAATCAAGAACCAACAACAACGAAGGCAACATCAACATCAGTAAG TTCCAAGAGAAGACGAATAACGATGGTTTTGGTAAGTTTTTGCAACGTGGGGTTAGTCCTGATCATGATACCCCTAGAGC TTCAAGGAAGGCTACGTCGGCAATGAAGTCGCCTTCAGCGTGGGCCCTTTCACCCGGGAGGCCCCCTCCGTTCGGTTCTG ATCCTCCGGCTAAAGCCATTGCGAACGGAAGTGGTGGTGGCGGAGGTGGTGTTGGTAGTGGTCCTGTTAGTAAAGTCTTG AAGTACTTCAAGCAAAGGAAAGTGACATCCCTGCAAGAAGAAATGTACCACCAATTCAGGATTTTGCATAACAGACTTTT GCAGTGGAGATTTATTAATGCTAGGGGTGAGGTTGCCATGGCTAATGTCAAGAATGTAGCCGAGATACGTTTGTTTTCGG TATGGCTTAGAAACCTCATGCTAAGGAAGATCATTATACAAAAGAGAACTGAATTGCAAAAAGTCAAACATAGGATCAAA CTTTATCATATTCTGAATGGACAACTTTCCCTTCTTACTGAATGGGCAAAATTGGACAGAAGAAATCAAGAATCAATAGG CAGATTAACAAGGAAGTTGTCAGCATTGTCCTCCGCATTGCCTTTAACTCACGGTGTCAAGGCAGATCCAGAGTCTCTTT TTGAAGCTTTGAGCTCAGCAATTGAAGTCATGGAAAATATTGAGTCGTTGATCACGAAATACCAGACACAGCAGGTTGAG AGGATTCTTTATCAAGTTACTGAACTAGCCACAACCTCAAAACAAGAAGAAGAGTATTTACAGGAACTTTTGGGGCTTGT TCCCATTATTGCTACTTTATTGGAGAATGAGAAAAATATTCAAGTGCATCTTATCCAAACGAGGACGAATACTAATAATG TGTTTGGATTGATGGCGGAGATATATTCTAAAGCACAATAA
Protein sequence (LotjaGi3g1v0099000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSARTLSGRGQLTVAPPSPSPMLVRSRSGTGLAAITTPERRNSQRFSSSERFTNIVHRSKSTSKSRTNNNEGNINISK FQEKTNNDGFGKFLQRGVSPDHDTPRASRKATSAMKSPSAWALSPGRPPPFGSDPPAKAIANGSGGGGGGVGSGPVSKVL KYFKQRKVTSLQEEMYHQFRILHNRLLQWRFINARGEVAMANVKNVAEIRLFSVWLRNLMLRKIIIQKRTELQKVKHRIK LYHILNGQLSLLTEWAKLDRRNQESIGRLTRKLSALSSALPLTHGVKADPESLFEALSSAIEVMENIESLITKYQTQQVE RILYQVTELATTSKQEEEYLQELLGLVPIIATLLENEKNIQVHLIQTRTNTNNVFGLMAEIYSKAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 75 | 75 | - | – | |
| PANTHER | 19 | 373 | 355 | 7.4E-109 | – | |
| PANTHER | 19 | 373 | 355 | 7.4E-109 | – | |
| MobiDBLite | 32 | 75 | 44 | - | – | |
| Pfam | 49 | 340 | 292 | 4.4E-69 | ||
| MobiDBLite | 96 | 150 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0099000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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