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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0104600 |
| Transcript ID | LotjaGi3g1v0104600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isopentenyl-diphosphate delta-isomerase; TAIR: AT5G55610.1 isopentenyl-diphosphate delta-isomerase; Swiss-Prot: sp|Q58618|Y1221_METJA Uncharacterized protein MJ1221; TrEMBL-Plants: tr|I3SGG5|I3SGG5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0104600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12948133..12954173) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTCTTCTTTTTCACTTTTCTCTTACCTCTCTTACCAAAGTGAACTATCTCTCTTACCCTAATCTAACTCATCTCCAC TAGTGTAGTCAAATTAATCCATAATTTTATAAGCGAGTTTGCCGCCATTTTCATAATTGCCGTGTGTTTTTTTACTGTAA CTAAACATCACTTTTCCACCGCACGAAAAAATTAAACTCAATTATTATGGACTAATTTGATTGTTAGTAAAAGAAATTAT TTCATAGAAAGTAGCATGCCCCTTTTTCCTAGACAAAGAGAGGGTTTTAGTTTTACCATCTAACCCAAGCCAAGCGGTGG CGTGAAATAGAGCTACGGCGGTGCTAGCGCGACGGAGAATAAGTGCGGTGCGGCGGCGAATCTTGTTGCGGCCTCCGGTG AAGACTGTTGAATTCAGATACGTGAGATCGATCTGGTAAGAGAAATTCGGAACAAGTGAAAACTTACTTTTTCCTTCACT TTTCCTTCCTCTCCCTTTCTTTCTCTCCATTTTCCTGTAAACCAAACAAGGACTTAATCAAAACTGTGATGGTTTTATTG CAGGAGAGAAACCTTGTTTTGTGCTGATTTGCGTTGTAAGGTCCAACAATGGCGGGAGTAGCTATACTTCTAGATCTATG GAGGAAGAATCAAAACTTGAGCTCTGGGCACGCCTTTCACTCTTCTGCCTCTTTCTCTGCCTCCACTGCTGCTACTGCAG CAGCCACTTTTGCTGCAGGGACCGGTTTTGCTTCCAGGGCTTTGTTTGGGTATGTTTGCCTCTGTTTTTCAGTGTTTTGG ATGATGGATTTGCTTTGTTTTGTTGAAAGGTGTTCATATGGAGCATGCAATTTCACCAAATAGGATCGGTTTAGGTTCGG TGATAGGGTATTTGATGATTTGTGGGATTGGACATAGCTGCGTTACTATTTATTTAGATATTTTTTTATCCTACTGGTGA GATTTTGAGGTTTCTGATAATGGGTTATTGTTGTTTTTAAGTGTTGTGAGTGTTAGGAAGTGATTTGGTTTCTGGGTATC AACTGAAATCAGTTCAGAGATTAGGCTTATTTAGAATTTTTTTATGTTTTTTTATGTTACTGGTGAGGTTTCGAGGTTTT TTGATCATGGGTTATTGTTGTTTTTAAGTGTTGTGAGTGTTAGGAAGTGATTTGGTTTCTGGGTATCAACTGAAATCAGT TCAGAGATTAGGCTTATTTAGAATTTTTTTATGTTTTTTTATGTTACTGGTGAGGTTTCGAGGTTTTTTGATCATGGGTT ATTGTTGTTTTTAAGTGTTGTGAGTGTTAGGATGTGATTTGGTTTCTGGGTAGTGGGTATCAACTGAAATCAGTTCAGAG ATTAGGGTTATCCATTACAAGGACATGAGTAGTAGGGTTTTGCTTGGTTAACCCTATAAGTATTTGAGAGATAGAAATAG AATACATTACTTAACAAATGTTACTGTATGAGATTATAGGTGTATCAGCAGCTTAAGGAGCTTTATAGGTATCACTTGCT AAACTGCATGATGAAGTTTGCTAACCTTTGTGTGTATTTCACTGAAATAAGATGTTATGCATGAGGAAAACATTCAGTTA CTTTCCAAAGAAGGCCAGGCAAAAAAAACAAAAGGAGTTGCTTTACACTGTCTACCCAAAATTTGACCTTGAGGACAAGG TCAATGCCGAGGAGGGGTGTAATGATACCTATGCCTTCATAGGCTGCACGTATCGTAGGAATAAAACATAAGGATTTAAT CGTGTTATTTTAGGAGCATATTTCTGGATATTTACAAGTTAGAATTTTATTGTTTTTTATCTTAAAGATAGGAAATTAGG GATTTTGTTTCTTAATTAGATAGGATCTAGTTTCCTATTTTCTTGTATATTAATCATTATAAAAGGATGATTTCTGAATT GAATAATATCAATAAAAAGAATTTCCTGAAGAAACCTACAGTTTGAAGATGCTCTGTCAAAGACGAGCCACTTTTTCTTT ATTCAGTCTGGGTTGCAAGAAGAATACTCTTTCTTCTAGACCCATGAACAGATCCTCCGCGAACGCGAAAATAGGAAACT AGATCCTATCTAGTTAAGAAACAAAATCCCTAATTTCCTATCTTAGAAGATAAAAAACAATAAAATTCTAACTTATAAAT ATCCAGAAATATGCTCCTAAAGTAATACGAATTAAATCCTTATTTTTTATTCCTACGATATGTGCAGCCTATGAAGGCAT CCGTATCAACATTATGCAAGAGTATGATAGATTTGTTTGGTGTCAATGTGTTTATCTTCCTTCGTAGTTCGTTGAGGATT TGATTCGATTTTATTTCATTTTGGTTATGAGTGTAGTGGGATCTGAAACAACGCTGGAATTGAGTGTAGTGAGTGATTTA TTATGTGTTGTACATATTTGTGTTTCTTCTTTTTTTTTTTAATTTGGACATGTTTTTCACACTAGGTTTCAATCCATACA TTTAAACTGAATTTTAGGTAAATTGTACTTTACCCCTTGAAGTTTCCATCTAATTATGAATGAACTTTACTGTACAAAAC TTTAAAATCCTGGAATTCCCTCCATGCAAGTTTTACAGACTAACACATGTTATTGATTTATCCTCCTAATACATGAATCT TACAAAGTTTTGTTAAGGTTTATTCAGATTGAATAAACCATACAGTAGAGAAGTGGAAAATACCATAGCTCCTCGTGTAT ATAGGAGAAAACAAGGAACTAGAATATCCAGTTGGTAAATTTTTGTTGAAGAAAATGATCTGCATTATGCCATATGAGTA TATGACCTTAGCGTCAGATATTTTACTAAACTTAACTTTCCCAGAGCTTTTGAATCCTCAAAGGAGGTTTGGGCTAAGCT ATGTATTTCTGAAACATCAGAGGTGTGAAACATAGTGTTTAACGTTATTGCACTCAAGTTTGTTTAGAGAAAAACCTTGA TGGGCTAAGTATAATTTATCAGTATTATGGAAATAAATGCTGTGCTCTACTTTAGTTTAACCATGTGCACATACATTTAG CAGTCTTGCTACTTTACTTTCAGGTCATCAGTTGCACACTGTGATGCTGGTGCAGCATTATCTGAAGACTATATTTCTAG TATACAAAGTGCTTCTGAAAGGATTTTTAACTATGATTCTCTAAGACATAGTACAAAGCAGTACAATGTTGAGCTGAAAC CTCTATTCTCTGCATTCGAATTGAGGGCCTTTGCAATGACTTCAATAAGGTCATTCTTGATGTTCTATTTACCTCTTTTG GAGCCCCGTGCTGAGATGGAAGATGATGAAGATTTCTTGGAGGATAATCAAGATCACCATGTCGATTTGGTTGTGCCCTT AAAAAAATCAGTGAAGCAAATCATACGTGAGGTGAGATTTTGTCTTACTTTTTCTATTCTTGGTTAGTAAGAGTTTTATC TTTTATTTTTCACAATTTATGACATTGCTTTGAGTGATTTGTCTTTTAATATCAGTAAACAACAACAGTGTTGAGCTGCT ATATGTAGCTTTTAACACGGGCAACCTCATTTCTATTTAAATTCTCTTTATTACTGGTAGATAAACGTTTTAATTGGGGT GGACAGCTTTTACTGTTTGTTAGTTAAATTAAGCTTTTAGTTTGTCTCATTGAATTTATTGCATCTACAAACTTCTTCGA AAACACGTACATATTTTTTGCCCATACTTGACGTAGGGTAACTAACTACCTTAGGGCTTGTATTCAAAAGATATAGGGAG AGAAGAATAATGTGCAAGGTATTGCTCATGGAGATAATGTGTTCCGGTTAACACCAAGGTAGTGTTGACGAACTTCTATT ATTTTGAAAATTCTGAAGTCCCTGTAACTGATTAGCTCTAGAAACCAGAATTTATTACGAACATATACTTAAAATTTGTA CTATGGTGTCTCTCGGTTTTGGCTAGAGATGGCAGGAAAACCCACACCTGCAGGCCCCGACCCAAACCCAACCCGAAATT TCGGGCGAAACCCGATTTCTTTGGGTTTGGGTTTCACTCAAATTTTAAAACTTGTTTGGGTGTGGGATTGATTAAACCCA AACCCGAAGTCTTGTGCATGTAATTACCAGCCCTTATATATAATATTAAAGTTACTAAATAGGGTTTTCTTTAACGTATA AACAAGAACTCTGTTTTCAACTTCTCGTCCAGCCCAGCCTTCATCTTCAACTTCGCGTAACGCGTGGGTGTAATCAGCTT ATATTCATGTTGTTCTCTTACGTACATGTTGTTTCCAGGTCGGGTTTTTGGGTTTTTTTCGGGTTCGGTGCTCACATCGG GGTTTGGGTTTGGGCTTAACTGTTGCACCCATATTGGGTTTGGGTTTGGGTTTGCCAACCCTTGTTCTGGCCTTTTGACT ATCTGGCTTTTAGGACTATGCTCTCTCTCCTGCGTTACTGCCTTTGATAATGAAATTTGGTACTATGGTGTCTCTTGTTT TCTTTTCTGTTGTTAATTACTCAAACTGAAACTACCTAGTTATTAAATTAATCTGGTTCCTTAAATTTTTATTCTACACT GTGTGGATCACCATGATGCATCTTACATTCTATTTCTCTATGCTTCTGACACTGTTTAGAACTTAGTTGGTGAATTGAAT GTGTCTTGGATGCTGTAACAGACTAGTGTTGTGACTACTAGAAGGATTTTGGAAAGAATTGCTGTCCATTATGTTTCACA ACGAATGGCGTGGAAACTTCTTAAAGGTATGTTCTCCAAACCTGTTTTAGATGCCCTTGCATGATTGCATCTGGGTGGGA GATAGGTTCGTTTGGCAGTGTGCTTTGATGAGATCACACAAGCACATATTTTTTCATGTTTTCTTGAACAGACGTCCCTA GATCAGCTACTCGCAAGGCTGCAAGGAAAATGCCGACTTTGGTTTACTTCTTCAGTGTGAGCAGAACTACTTTTAGAGGT AAATGTGATCCATGATTCATCTGTAATCTGTTTGTTAAAAGATTACCAGAGCTTTTGACATCAACTCTATTGTGCAAACT ATGTGTTCATTATGTGCAGGACACATGCTTGGAGTTGCAGCATCATGGCTTATCCAAGTAGGTGTTGACTTGTATCGGTT TATTAAACCCATGTTCAAGTCCAAGGATGAGGATATTGATGGTGATAAAACCAAGCAAGTTGGACCTCTGGCACCAAAGA TTGTCATTGCTACAATTAGGTGCACTTCATCTCTAATTTTTGCCTCCATAGGGGCAGGGATTGGTGCTACCATTGTTCGT CCATCACTTGGCCAGTGGATTGGTAAGTTTTTTGGATTTGACTCCTCTAAAGGGACACATTTTTTGGATTTGGGGATTGG AAAAATCAACGTTTGTTATTGTGATCATATACTTGCACATGTATAACATATTATGGTGCTCTACCTTTGTGCTTGCATTG TGTCAGGTTGTTTTTATTATTTCACTACCTAAGGCTAAATTATGTGATTTTTTGCAGGATGTGCTGTTGGTGATTTGACT GGTCCTATTATTGTAGCATTTTGTTTGGACCAAGTATTTCAAGTGAAACTTTAGTGCGAGTTATGTTTTCTGACTTGTTC CTTACCTGCTTCAAATGCCTGGTGCTGTTTTGATATGCCATTTCAGATTGAGCAACTCACTAAATTCGCTAGACTTCATT TTAGCTGAAAGCAATATGTAACATTTTTCCATGATAGCCACTTTTTAATTTAATTGTTTCATTTGATATTTCTAATAAAT ACAGTTGATCAACACTCTTTTATGACTTTGAATTATGCCAATTATTTTGAAATCCTTGTACTTCCCCCCAAAAGAAAGTA GTGAAACAATAATTTTCCTCAAAACTTTGATTCATTCTTTTTGTTCAATATACAAGAGTCACTTTCTTCCTTATTTTGAG TACTTAATGATGAAGGATTTCTGTACTTGTGATGACAATTATAATGAATTTTTCGAGAGAAAAGATGATCAATTTAGACA TTCCATTTAATATCATACGTAAATAATATATTAGAATCAAA
CDS sequence (LotjaGi3g1v0104600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGAGTAGCTATACTTCTAGATCTATGGAGGAAGAATCAAAACTTGAGCTCTGGGCACGCCTTTCACTCTTCTGC CTCTTTCTCTGCCTCCACTGCTGCTACTGCAGCAGCCACTTTTGCTGCAGGGACCGGTTTTGCTTCCAGGGCTTTGTTTG GGTCATCAGTTGCACACTGTGATGCTGGTGCAGCATTATCTGAAGACTATATTTCTAGTATACAAAGTGCTTCTGAAAGG ATTTTTAACTATGATTCTCTAAGACATAGTACAAAGCAGTACAATGTTGAGCTGAAACCTCTATTCTCTGCATTCGAATT GAGGGCCTTTGCAATGACTTCAATAAGGTCATTCTTGATGTTCTATTTACCTCTTTTGGAGCCCCGTGCTGAGATGGAAG ATGATGAAGATTTCTTGGAGGATAATCAAGATCACCATGTCGATTTGGTTGTGCCCTTAAAAAAATCAGTGAAGCAAATC ATACGTGAGACTAGTGTTGTGACTACTAGAAGGATTTTGGAAAGAATTGCTGTCCATTATGTTTCACAACGAATGGCGTG GAAACTTCTTAAAGACGTCCCTAGATCAGCTACTCGCAAGGCTGCAAGGAAAATGCCGACTTTGGTTTACTTCTTCAGTG TGAGCAGAACTACTTTTAGAGGACACATGCTTGGAGTTGCAGCATCATGGCTTATCCAAGTAGGTGTTGACTTGTATCGG TTTATTAAACCCATGTTCAAGTCCAAGGATGAGGATATTGATGGTGATAAAACCAAGCAAGTTGGACCTCTGGCACCAAA GATTGTCATTGCTACAATTAGGTGCACTTCATCTCTAATTTTTGCCTCCATAGGGGCAGGGATTGGTGCTACCATTGTTC GTCCATCACTTGGCCAGTGGATTGGATGTGCTGTTGGTGATTTGACTGGTCCTATTATTGTAGCATTTTGTTTGGACCAA GTATTTCAAGTGAAACTTTAG
Protein sequence (LotjaGi3g1v0104600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGVAILLDLWRKNQNLSSGHAFHSSASFSASTAATAAATFAAGTGFASRALFGSSVAHCDAGAALSEDYISSIQSASER IFNYDSLRHSTKQYNVELKPLFSAFELRAFAMTSIRSFLMFYLPLLEPRAEMEDDEDFLEDNQDHHVDLVVPLKKSVKQI IRETSVVTTRRILERIAVHYVSQRMAWKLLKDVPRSATRKAARKMPTLVYFFSVSRTTFRGHMLGVAASWLIQVGVDLYR FIKPMFKSKDEDIDGDKTKQVGPLAPKIVIATIRCTSSLIFASIGAGIGATIVRPSLGQWIGCAVGDLTGPIIVAFCLDQ VFQVKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 325 | 325 | 6.4E-151 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0104600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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