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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0105000 |
| Transcript ID | LotjaGi3g1v0105000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G68620.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LFR7|CXE17_ARATH Probable carboxylesterase 17; TrEMBL-Plants: tr|A0A072UUF6|A0A072UUF6_MEDTR CXE carboxylesterase; Found in the gene: LotjaGi3g1v0105000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13036508..13038119) extracted from Lotus japonicus Gifu genome v1.2.
CGATTTTTATCAAAATATATAAAAAAGAGAAGACTTCGTCGTCAACCATAATTTCCAAAAGCACCCACTCTCCTTTTCAT ATGATATAAGTTCTTGGAAGCTTCATCCGTTCATCTACCCTTTGATGTTACGCTTTTCCACACGTTCAAAGGCCCCCTCT TTCCACTATATATGTCACTCAAAGAAGACCAAACACATTGCACACAAGAACTCATCAGTGTCTTTCAAACACTTCTAAGC GAGAGTCAACCTTTCAGTGTCCAGTATTCGAGCATGGCCCGAGAGAAGAAGCTAGTGGACGAGGTGTCAGGTTGGCTCAG AATCTATGATGACGGTTCAGTAGACCGTACATGGACCGGGCCTCCTGAGGTCAAGTTCTTGGTCGACCTTGCGCCTCCCC ACGAACAATTCATCGATGGTGTTGTCGTCCGTGATGTGATCACCACCACCCGCGACGGTTCCGACAACCGAGCCCGATTG TATATGCCAGAGAAAACACCGGATGATAAACACAAGCTACCCATACTCCTCCACTTTCACGGAGGCGGATTCTGCATTAG TGAACCGGACTGTTTCATGTACTACCAAATCTACACCCGATTCGTCCGGTCAACCCGGTCCATCTGTGTCTCCCCATTCC TTCGTCGTGCCCCAGAGAACCGCCTCCCTGCCGCGGTTGATGATGCGTTTGCAACACTTCAGTGGCTCCAATCTGTCGCC AGAGGTGAGTCACGTGAGTCGTGGCTCGAGGAGCATGGGGACTTCGGCCGGGTTTTTCTCATAGGTGACAGCTCCGGAGG GAACCTCGTCCATGAAGTGGCCGCGAGGGCCGGTTCTGTGGACCTGAGCCCGGTCCGGCTGGTGGGAGGAATTCCCATTC ATCCCGGTTTTGTTCGGTCGAACCGGAGCCGGTCTGAGTTGGAAATGCCGCAATCACCGTTTCTGACATTGGACATGCTG GACAAGTTCTTGAGCTTGGCACTACCGTTAGGGAGCAACAAGGACCACCCCATTACATGCCCCATGGGTGCGGCGGCGCC ACCGCTGGAGGGGCTGAAACTGCCACCGTTTCTGCTGTGCTTGGCAGAAATGGAGTTGGTGTGGGACACGGAGATGGAGT ACTATGAGGCAATGAAAAAGGCTAATAAAGATGTGGAGCTGTATGTGAGCAAGGGAGTGACACACAGTTTCTATCTGAAC AAAATTGCTGTGGATGCGGACCCCATTACTGGTGCCCAAACGGATGCTCTCATTGCAAGGGTCACAGAGTTCATCGACAA GCACTAAGTCTTTGGTGTGAATGCTGTGTGTTTTTGTTTGTTTGTCTGGGTAGAAGTTGTTATGGTGTACAATAAATTAA ATTCACACCCTAAACTCATAGAAATAAAGAGAAAAAAAAAACGGATGAGTGGTGTGATAAAAAAAAGATTAAAAGAAAAA TTAAAAAAAAGTGAGAAATGAAAGAAGAGTTGTAATTCATTCACAATCCATTTATCTTTCATTTAAATTTTACCATTTTT TTTTCATATTTGTATGTTCTTTTCCTATTACATGGTGGATTATATATCTTTTATCGATCTCGGTATCTCTCAATTATAAA AACTAAACACTA
CDS sequence (LotjaGi3g1v0105000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACTCAAAGAAGACCAAACACATTGCACACAAGAACTCATCAGTGTCTTTCAAACACTTCTAAGCGAGAGTCAACC TTTCAGTGTCCAGTATTCGAGCATGGCCCGAGAGAAGAAGCTAGTGGACGAGGTGTCAGGTTGGCTCAGAATCTATGATG ACGGTTCAGTAGACCGTACATGGACCGGGCCTCCTGAGGTCAAGTTCTTGGTCGACCTTGCGCCTCCCCACGAACAATTC ATCGATGGTGTTGTCGTCCGTGATGTGATCACCACCACCCGCGACGGTTCCGACAACCGAGCCCGATTGTATATGCCAGA GAAAACACCGGATGATAAACACAAGCTACCCATACTCCTCCACTTTCACGGAGGCGGATTCTGCATTAGTGAACCGGACT GTTTCATGTACTACCAAATCTACACCCGATTCGTCCGGTCAACCCGGTCCATCTGTGTCTCCCCATTCCTTCGTCGTGCC CCAGAGAACCGCCTCCCTGCCGCGGTTGATGATGCGTTTGCAACACTTCAGTGGCTCCAATCTGTCGCCAGAGGTGAGTC ACGTGAGTCGTGGCTCGAGGAGCATGGGGACTTCGGCCGGGTTTTTCTCATAGGTGACAGCTCCGGAGGGAACCTCGTCC ATGAAGTGGCCGCGAGGGCCGGTTCTGTGGACCTGAGCCCGGTCCGGCTGGTGGGAGGAATTCCCATTCATCCCGGTTTT GTTCGGTCGAACCGGAGCCGGTCTGAGTTGGAAATGCCGCAATCACCGTTTCTGACATTGGACATGCTGGACAAGTTCTT GAGCTTGGCACTACCGTTAGGGAGCAACAAGGACCACCCCATTACATGCCCCATGGGTGCGGCGGCGCCACCGCTGGAGG GGCTGAAACTGCCACCGTTTCTGCTGTGCTTGGCAGAAATGGAGTTGGTGTGGGACACGGAGATGGAGTACTATGAGGCA ATGAAAAAGGCTAATAAAGATGTGGAGCTGTATGTGAGCAAGGGAGTGACACACAGTTTCTATCTGAACAAAATTGCTGT GGATGCGGACCCCATTACTGGTGCCCAAACGGATGCTCTCATTGCAAGGGTCACAGAGTTCATCGACAAGCACTAA
Protein sequence (LotjaGi3g1v0105000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLKEDQTHCTQELISVFQTLLSESQPFSVQYSSMAREKKLVDEVSGWLRIYDDGSVDRTWTGPPEVKFLVDLAPPHEQF IDGVVVRDVITTTRDGSDNRARLYMPEKTPDDKHKLPILLHFHGGGFCISEPDCFMYYQIYTRFVRSTRSICVSPFLRRA PENRLPAAVDDAFATLQWLQSVARGESRESWLEEHGDFGRVFLIGDSSGGNLVHEVAARAGSVDLSPVRLVGGIPIHPGF VRSNRSRSELEMPQSPFLTLDMLDKFLSLALPLGSNKDHPITCPMGAAAPPLEGLKLPPFLLCLAEMELVWDTEMEYYEA MKKANKDVELYVSKGVTHSFYLNKIAVDADPITGAQTDALIARVTEFIDKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 35 | 371 | 337 | 1.36E-55 | ||
| PANTHER | 37 | 370 | 334 | 6.2E-149 | – | |
| PANTHER | 37 | 370 | 334 | 6.2E-149 | – | |
| Gene3D | 37 | 371 | 335 | 4.2E-66 | ||
| Pfam | 119 | 341 | 223 | 2.9E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0105000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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