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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0109200 |
| Transcript ID | LotjaGi3g1v0109200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT3G54390.2 sequence-specific DNA binding transcription factor; Swiss-Prot: sp|Q9LJG8|ASIL2_ARATH Trihelix transcription factor ASIL2; TrEMBL-Plants: tr|A0A1J7IPA2|A0A1J7IPA2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0109200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13471695..13475717) extracted from Lotus japonicus Gifu genome v1.2.
TGTGTGTTACTAGCCATTTTTCTAAGCGTTATTGATTATAATTTCACACTTGAAAGTTGAAAGTGCATCTCATCTCAGTT CATGTTGGAGCCAAATCCACACCATCAACCACCACCTCTCTCCACAAAAGCAATGAAAAGAATAGTTAAGGGATTGACAT CATTAACATATTTGACAAAAAGTGAACTCCTTTTTCCCCTTTCCATCACCCGTTATTGCTAGCCATTCTTTTCCTTTTCC TATTTTTTCCCACTCTTTCTAATGCTAGTGGTTGTCCCCACTCTTGTTACCCTTTCTTATTCTTAGACTCATGTGAAATT TGCCCTTAGGAGCATGTTAGCAGCTAAACACAAAGGGTTAAAAAAATTCTAGTCCTTGGGGGTGGATATGAGAGATGGAG AACAAAGTAGAGAACCAAGAACATCACCACCCTGCATCTCTCCTCCCCAATATTCATAGCACCATCACAGCCAAGGAAGA GTCTCCAAGAAAAGCCATTGGTGGCGGCGGCAGTGGTGGTGGTGGTGACAGGCTGAAGAGGGATGAGTGGAGTGAAGGAG CTGTGTGTACACTTCTTGAGGCCTATGAAGCCAAGTGGGTGCTCAGAAACAGAGCAAAACTCAAAGGCCAGGATTGGGAA GAGGTTGCAAAACATGTCTCTTCAAGAGCAAACAACACTAAGTCACCAAAGACACAGACACAGTGCAAGAACAAGATAGA GTCCATGAAAAAAAGGTACAGATCAGAGTCAGCAACTGCTACAGATGCAGCATCTTCTTGGCCATTGTATTCTCGTCTTG ATGTTCTGCTTCGTGGGACAGGACCTGTGTCACCACTTCCACAGCCACAAACAGCGGCAACAGCAGCACCTTCTCAATCA CCACACCCCAGCAATAACCATGCCTTGATGTTGCTAGAGCCATCACTTGCAGTGTCACAAGCTCCCTATGAACCACCACC TCCTCCAGTTGCTCCTCCTCCAGCTGCTACTGCACAAAACTCATATGGATCCAATGGTGTTGACAAATTAGCCAAGGTAG ATTTTAGTTTAGTTTCTTTTTTGTTGCATTTTCTGATCATGGATTTCACCATCTCGAGAGGATTTTTACCTTTGTAAACC TTTCTGTTAAGCTTGAGTTCTGACTGCTGTACCAGTGAAACAAGAGTCAATGATCACTTTGGTCTCGGAAAGATTTTTTC GTTGCAAGTTAGTCGCGGGAAGAAGTAAATACGTTCAAAGCCCCTGAAGCTGTAAAAAGCTTGTCGAATTTAGTCAACTA AAACCTCAGTCTAGTTAATTTTAGTAGGAACTATCTTGATTGTCGTTTTACACATCCAGGGTCTTTTATAAGGTATTTTT TTCTTTTCAGGACCTAACTTGCTTAGTAGAAAAATCTTTCAGGAACTAACTTAGTATGTGTTTGGATACCAGTTGAGCGC AGCAAAATTTCATCTTAAAAAATAAAACAAGTTTTGTTTTTTTTTTCTCAAAATGAGTGTTATCTTTTACCTCCACATAT TTGAAAGAGTATTCAAATATAACCTTATGCATAAAACTTATGAAGATCATTTTCTTTTCTTCACAAAGGTTTTTGAAAAA TAATGTATGATGTTATTGCATCAAGCAGGGTATCATAATAGAGAACAGATTTTGAATTTTACAGGTCACTTGAAGGGAAG TTGTGATCTCTGCAAATTTGTTTAATTCTCCATTTTTCTAGTATTCTTATACTGATTTTCCTTGCTGCATGAATAAGACA ACAATTTGCAGAAAACAAGTGAAAGTGTGAAACAATTTACAAACATGAAGTGAACAGTGAAGTAAAATGTCATTTTCAAA TAATTAAATTGTAATCATTGTTTGCTGAATCAGGCCTTCCATTATACTATATATTTATGTATTATTTTTAGGAATCATTG CAACAGACAAAATAGGCCTGTTATTGTGTGGGAGCTATATAGCTAGCTACATACAATTTATTTTAACCATATAATGTGCA ATTGAAGTTGACATGAAATCAGTCAGGAAACTCATTAGCCATGTCCTCTAACTTTTCAAAATTGGATTTAATTGGCTTCT CTTAGTGGACCACTTTAAAAGCTAAAATAAAAAAACTGTAACCATCAATAGTTGAAATTTTAACAACTATTATGTATTCT ATCATAAGAGCAATGTTTGGTACACATTAAGAATGAAAAAAATAAGAGAACAGACAGAAGTGATAGATATGTTGTGACCC CTAAGGTGCTAATAAAATGGGGTGTTTGTAGGGTCTTAATGAGTAATGATATATACACACTTCACTTTCTCTTACATCTC ATTTTCACCCCTTCTTCTTCCTGTTTCTCTCTGCATTTTCTGTCACATCACACATCATATCAGTTATATCTATTAATTCT CTTCTTATTTAATGAGGTGGAGGTGAAAAAGGAGTGGGCAAGTATCATTATTCGGGTCTTAATATTGTTTGAGTGTTTAA ATATCATGATTTTCATCATTATGCACATTATTCCTTTACACTGTGTTTGTTTGCGGGTGCTTTGGGTAGAGAGAGATAGG TGAGAGAGAAGTTGGGGAGAGATGGAGATTCCACCCTCGTTTGGTTGCATTTGACAGGAGGGAAGAGAGAAACAAATTGT GGGCCCAAGACAATTTTCAAGGTCTTCGCAAATTGAGCAGAGATTGACACAAGCATAGAAAATTTTCCACTTTCTCTATT ATACCCTCAACACTCACGAATTTTTCACAAACTAGCACAGACACAATTATTTTCTCTTTTCTTTATTCCATTGTACACAA AAGTGTCTTTTACAACAAAACTTTATTTTTTCTCTCTCTTCCACTTCATTATTTCTCATCTCTCTCTTCTTTATCTCAAC CATACCAAACAACCCAATAAATCTATTCTATTTCTCACTTATTTTTCTCTACTTAACTTCTCTCTTCTCTACTCTCTCTT CTCTATCTCTCTCTTCTCTACCAAACGGAGCCTTAGAGGAGGTTAATAGTCAAAATATATTGCATAGATACACACATATA AATATATTGATGATTTCTCAATGACAGGAAGAAGGATTAGGAACTAAGTCATCTGATCATGTGTCTAACAAGAATCCAGT GGACACAGATAGCAGCACACCTGCACTTTACAGTGAAAAGGAGGAGCTAAGATGCAACAAGAGGAAGATGAAAACAGAGA ACATGAACAAGAGAAGAAGGAAAGAAGACTCAGAGATAGCAGAGAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGGTCA GAACAAACAAGAATGGACACAATGAAAGAGATAGAGAAGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAAATGGATCT CAAAAGAACTGAAATCATTGCCAACACACAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCAT CATTGAGAATTGGAAGAAGCTAAGGTTAATTAAATCATTTAATCTGATTGAATAATGGTTTGTGTGTATAGAGTTTATAA TCAATTGTAATATATTTTGAAGGGGAAGAGAAGGGAGATTTATAACAACTCTGTAATTTGTCTAACTAGTGAAGTGAGCA ACATAAGGTAGAGACAAAAACTGTCTCTCCTAACCTTAATTGTAGACCGTTAATTGTAAGTTTGAAACCTTCTCTTCAAT TGATAAAGAAATCAATGGCTGCTTCTTCCATTATTTGATACTAAGGTAGGACTTAGGAGGAGTATTCATGTTAGATGTCT GGTTTGACCTTTTTAGTGTGTTTGAATTTGTATATGCAAGTAAAGTCTGTACATATATGTATTTCGGAAAATAAGTTAAT TATCAACATCCTAAGGGGTGAAAATTTATGTCACATTACCGAAAGAATTACAGAGGGTTTTTTGAAATCCGTCAAGAAAG AATTACCGACGAGCCAAAAATAGCAACGGTGGTTTGACTATCAGTTAGTCATCTGTAATTAAGTATTATTGATGGTTTTT GTTAAGCAACCAATTTTCCCAGG
CDS sequence (LotjaGi3g1v0109200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACAAAGTAGAGAACCAAGAACATCACCACCCTGCATCTCTCCTCCCCAATATTCATAGCACCATCACAGCCAA GGAAGAGTCTCCAAGAAAAGCCATTGGTGGCGGCGGCAGTGGTGGTGGTGGTGACAGGCTGAAGAGGGATGAGTGGAGTG AAGGAGCTGTGTGTACACTTCTTGAGGCCTATGAAGCCAAGTGGGTGCTCAGAAACAGAGCAAAACTCAAAGGCCAGGAT TGGGAAGAGGTTGCAAAACATGTCTCTTCAAGAGCAAACAACACTAAGTCACCAAAGACACAGACACAGTGCAAGAACAA GATAGAGTCCATGAAAAAAAGGTACAGATCAGAGTCAGCAACTGCTACAGATGCAGCATCTTCTTGGCCATTGTATTCTC GTCTTGATGTTCTGCTTCGTGGGACAGGACCTGTGTCACCACTTCCACAGCCACAAACAGCGGCAACAGCAGCACCTTCT CAATCACCACACCCCAGCAATAACCATGCCTTGATGTTGCTAGAGCCATCACTTGCAGTGTCACAAGCTCCCTATGAACC ACCACCTCCTCCAGTTGCTCCTCCTCCAGCTGCTACTGCACAAAACTCATATGGATCCAATGGTGTTGACAAATTAGCCA AGGAAGAAGGATTAGGAACTAAGTCATCTGATCATGTGTCTAACAAGAATCCAGTGGACACAGATAGCAGCACACCTGCA CTTTACAGTGAAAAGGAGGAGCTAAGATGCAACAAGAGGAAGATGAAAACAGAGAACATGAACAAGAGAAGAAGGAAAGA AGACTCAGAGATAGCAGAGAGCATAAGGTGGCTAGCAGAAGTGGTGGTGAGGTCAGAACAAACAAGAATGGACACAATGA AAGAGATAGAGAAGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAAATGGATCTCAAAAGAACTGAAATCATTGCCAAC ACACAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTGAGAATTGGAAGAAGCTAA
Protein sequence (LotjaGi3g1v0109200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENKVENQEHHHPASLLPNIHSTITAKEESPRKAIGGGGSGGGGDRLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQD WEEVAKHVSSRANNTKSPKTQTQCKNKIESMKKRYRSESATATDAASSWPLYSRLDVLLRGTGPVSPLPQPQTAATAAPS QSPHPSNNHALMLLEPSLAVSQAPYEPPPPPVAPPPAATAQNSYGSNGVDKLAKEEGLGTKSSDHVSNKNPVDTDSSTPA LYSEKEELRCNKRKMKTENMNKRRRKEDSEIAESIRWLAEVVVRSEQTRMDTMKEIEKMRVEAEAKRGEMDLKRTEIIAN TQLEIARIFASVNKGVDSSLRIGRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | - | – | |
| PANTHER | 1 | 342 | 342 | 1.5E-150 | – | |
| PANTHER | 1 | 342 | 342 | 1.5E-150 | – | |
| Pfam | 49 | 137 | 89 | 2.5E-20 | – | |
| MobiDBLite | 143 | 169 | 27 | - | – | |
| MobiDBLite | 146 | 168 | 23 | - | – | |
| MobiDBLite | 181 | 270 | 90 | - | – | |
| MobiDBLite | 182 | 197 | 16 | - | – | |
| MobiDBLite | 223 | 239 | 17 | - | – | |
| MobiDBLite | 240 | 270 | 31 | - | – | |
| Coils | 245 | 265 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0109200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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