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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0117600 |
| Transcript ID | LotjaGi3g1v0117600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BZIP transcription factor family protein; TAIR: AT3G51960.3 basic leucine zipper 24; Swiss-Prot: sp|Q8GTS1|BZP24_ARATH Basic leucine zipper 24; TrEMBL-Plants: tr|V7BWT3|V7BWT3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0117600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:14430680..14432521) extracted from Lotus japonicus Gifu genome v1.2.
CATTCTAGAAACCACTTTACAACAATCATGCTCATGCTTGCCACCAAGGACCAGGTAAATGAATTCTCTCATCACTCATC TCTAATTTAATAAAAAATCAGATGAATTCTCCCACTTTCATGCTTCTTTATTGGCTCTTTCATATGATTCTCAATGAATT TTGTTTTTTGCTGCTATATATTATGCTCTGTCATCTTGCCTCCACTTGAACTTGGATTCTCTCTTCCTCCTCATATTATT ATTTCATCATAAAAAAAAATAAAGTTTTGCCTTTATGCTCAATTCTGCATCATTGGGGGTAGAATCCAACTGGGTAACCT TTAGTTTCTTCAATTAAGCTGCTTTGAGAAGAATCTTTACAGCCCCAAACTCCCCCAAACATCTAACTTTGAGCATAGAA TTTGACTTCACCCTATGGCCAATTGTTCAGTCATATATGTTCCTTGATTAGGACTCCTCAAATGAATTTTTCTTGACTGT TTTTTGTTCTAGGTATATGCTTCAAATTCAATTCTTTGCATATATTCCATAATAGGTCCTGGTACCAGTTTGTTTTGTCA TATATCTGATATATTTGAATTCTTTATTTTTTCTTTCAATTCCATTTTCATTTTCAGTTTGTCTGTGCATCAGTATGTAC TTCTTTTGGTAGATTGCAGCTAACTTTGGTTCAAGGTGAAGAAACAAAATATGGATGATGGAAATGCTGAGCTTTCTGAT AAGCTTTCAGATAATGTTCTGTTTTCAAATCCAGAGTCATCTAGCAAGTTTCATGCCTCAACATCAGTGAATACAGACAC AGTGACTGAATTGTCGTGCACCCATACTCATACTTGCAACCCACCTGGCCCTGATTCTGCTCACACACACACATGTTACC ACACACACACCACCCAAGTTTTTGCATCTGAAGAAGATACCAACTCAAAACCAAAAACGGCTTCTGGGAACAGAGAAGCT GTTAGAAAATATAGGGAGAAAAAGAAGGCTCACACTGCTTATTTGGAAGAGGAAGTGAAGAAATTGCGTTTGGTGAATCA GCAACTAATGAGGAAGCTACAAGGGCAAGCACTTCTTGAAGCTGAATTGTCAAGGTTGAGGAACACTTTGGCAACTCTAA AAGGCAAAATAGATAGTGAATTGGGTTCTTTCCCTTTTCAGAATAAGTGTAGCTCTTCTACTTTTGTCAAAAGGGATGTT GTTTTTCCATGCTTCCATCAACATGGAGTATCATCATCTAGGGTTAATGTTTGTGCATGTGGAAAATCCATGATGATGCC ATGGGAAGGAAACTGTCAACCTGAAATAGTGGATTGTCAAGTGGATACAAATAACATGACCTGCACTGAAGGACAAACTA GGGACACTATGGATAAGTTTATGCCATCTGCATCTCAAGATGGGTAATTAGCCAGACACTGCATGCATGTTTGGAAACTC GTCAACAATTAATTATGAAGGCAAAATCGGTTTTGTGGAGATCAAGCTTCTGTGTGTAGCTTTTGGTTTCATAATTGATT CCGACGACTGATTCCAATCTTCTGTGAGTTTCTTTCCGATTCCTATCACTGATTAGTGATTATATGTTGGTGGTACGTAA GCTCAGGTTTTGTATATATAATTGGTGTTACCATGATAGAATGCATGTTATATAACTCATAACTTACCCTAATGAAGCTT GATTTCTACAATTTATAGAATATGTATATGTATACGCGGGCAAAGTTTTGTTGAAATTTGTACAATATAGCAGCCTGTAA AAAGTGTTTTGCGTTTAGATAAAGATAATTACTTGTGCGTCAAGTTTGTAATATTTAATAAATTACTACTTTAATTGCTC TT
CDS sequence (LotjaGi3g1v0117600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATGTTCTGTTTTCAAATCCAGAGTCATCTAGCAAGTT TCATGCCTCAACATCAGTGAATACAGACACAGTGACTGAATTGTCGTGCACCCATACTCATACTTGCAACCCACCTGGCC CTGATTCTGCTCACACACACACATGTTACCACACACACACCACCCAAGTTTTTGCATCTGAAGAAGATACCAACTCAAAA CCAAAAACGGCTTCTGGGAACAGAGAAGCTGTTAGAAAATATAGGGAGAAAAAGAAGGCTCACACTGCTTATTTGGAAGA GGAAGTGAAGAAATTGCGTTTGGTGAATCAGCAACTAATGAGGAAGCTACAAGGGCAAGCACTTCTTGAAGCTGAATTGT CAAGGTTGAGGAACACTTTGGCAACTCTAAAAGGCAAAATAGATAGTGAATTGGGTTCTTTCCCTTTTCAGAATAAGTGT AGCTCTTCTACTTTTGTCAAAAGGGATGTTGTTTTTCCATGCTTCCATCAACATGGAGTATCATCATCTAGGGTTAATGT TTGTGCATGTGGAAAATCCATGATGATGCCATGGGAAGGAAACTGTCAACCTGAAATAGTGGATTGTCAAGTGGATACAA ATAACATGACCTGCACTGAAGGACAAACTAGGGACACTATGGATAAGTTTATGCCATCTGCATCTCAAGATGGGTAA
Protein sequence (LotjaGi3g1v0117600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDGNAELSDKLSDNVLFSNPESSSKFHASTSVNTDTVTELSCTHTHTCNPPGPDSAHTHTCYHTHTTQVFASEEDTNSK PKTASGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLMRKLQGQALLEAELSRLRNTLATLKGKIDSELGSFPFQNKC SSSTFVKRDVVFPCFHQHGVSSSRVNVCACGKSMMMPWEGNCQPEIVDCQVDTNNMTCTEGQTRDTMDKFMPSASQDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| MobiDBLite | 12 | 32 | 21 | - | – | |
| PANTHER | 12 | 190 | 179 | 1.4E-60 | – | |
| PANTHER | 12 | 190 | 179 | 1.4E-60 | – | |
| Gene3D | 71 | 145 | 75 | 1.2E-7 | – | |
| MobiDBLite | 73 | 94 | 22 | - | – | |
| SMART | 78 | 142 | 65 | 1.0E-5 | ||
| SUPERFAMILY | 86 | 124 | 39 | 8.13E-6 | – | |
| Pfam | 86 | 132 | 47 | 1.1E-10 | ||
| CDD | 87 | 134 | 48 | 1.26909E-11 | – | |
| Coils | 126 | 146 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0117600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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