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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0126400 |
| Transcript ID | LotjaGi3g1v0126400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hydroxyproline-rich glycoprotein; TAIR: AT2G32840.1 proline-rich family protein; Swiss-Prot: sp|C9D7C2|CAC1A_APIME Voltage-dependent calcium channel type A subunit alpha-1; TrEMBL-Plants: tr|V7BSX7|V7BSX7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0126400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15511770..15519784) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCCCTCCCAATTTTCCTTCTCCCCCATCTGAGAAAATAAAACCACACAACACAACACAACCCAACAACTTCAATTCT TCATTTTCCTCCTCCGCCATGCCCGTCGATCCCGCCGCCGCCGCCGCCACCACCACCACCGCATCAAGACCTATATCTCC ACTCCCTCACCCACACCCACACGCTCACCACCACCACCACTACCAATCACCACCACAGCAACAACAAACCCTTCCAATTC GCGCCCCAAACCCTCAATTCCCCAAACCTCACGATCCATCATCTCACCACTATCTCTACCCTTTCGCCTCTTCCGCCCGC GGCGGCGGCCCCTTCGTTGCCAAAGGGTTTGGACCCCTCCCCGCCGATCCTACTGTCTCCGGTTACCCTCCGCCGCCGCC ACCTTCTCTTATGTACTCTCATGGCGTTCGCGGCATGCACTTGGATTATCTCACTCACGCCTTACACATGAACAGGCCTC CTCACTTGCCTTACCCCCATACGGGTCACGCTCCTCCTGCTTCTACTGCCTCGCCTCCGGTTAAAGGTCACACCAAGGTC TCACCATTGAAACTCTCTTTGCTGTCTTGTGGTTTTTATTTGTGTGAAATCATGAAATTTTTGGTTCTATATCTTCAATT ATGCTTTTCCTTTTTGTTATCAGGTTCTATTATGTTCTCCAATTTAAATTAAGTAATTGTACAAATTGGCTTCTATTGTT GTGGTGAACTTGAATTGAATACTGTGCTTAGAAAGTGTGTCTTGTTGTTGTGCTTTGAAATCAGGATCACAAACTTATTT TGAGATGGCATTTTCAAGTATTGCTTTCATTTTCTTATATTAATTTTTTTTGGGTTTTTGGTTCTGTCTTTAGGCTACTG CTAGATCTGCGGCTTCGGATGTCAATGGCCACAAAGATACCAGTACAAGGTGAATTTTTTTAATGATGTGTGGTGTATTC AATTTGGCGTTCTGTCACATTTTATTTTGGTCGTGGAATTGGATTGATATCTTTGATGTGTTTCTTAGGGAACGAAGCAG AGATGAAACTTTTGTCGTAATCAGAGACCGTAAAGTGAGCCCAAATTCTCTTGTTTTACATAATTTGAATTGTGTGTCTT ATAGTGCAGCTCCTAATGAATTCATCTACATTTATTCAATTTGCGAGAATTGGGCGCTCTTTCTTTTTGTGTGTGATGTG TACCACTTAAGTTTCAATAAATTGCAATGCATGTTTGAATTCTTAAAAAACACATTTGGAACTGCATGATGAGCTTAGAT CTGTCTCTCACAGTTTCAGGGCATCTCTTGCACTGTATATCCTAGCCATTGTATTACTGTTTCCTAATCTTGTTTCAACT TTCGTATTTTGATTTCTTTCTAAGTTAAACTTCTTTTGTAAACTTTCAATGGTTGTGATCCAAGTACTCTTTGCCTCAAA TAAGTTGATGGCACATATATTGTTTTCTTTTTCCTCCTGTTTTCAATTTATACCTTATAACATGTTCTCTATACTCACTT TTTTAGATGGTTTTATTCTCTCTAGTCAAACAAAGTTGTTCCATAAAGCGTAGTGGATATTGTTGTCATTTTCTCCTGTG ATTTATTAGGTATCATGCAGAACTCCACCCATAGCTCTTTACCTCAAATTCATTGAACAAGTGGGTTTTATTATTCATTG ACCAAGTGGGTTTGGTAGCTCTTCCCTCGGTCTTCTTTTGTCCTTGTTCTTACAAGGAAAAAGGTCTCTACAAGATAAGT AGCAAAGTAAAGATGAGGAGATTGATGATTCTTAGCTTTATAGTTGGGTGTATTTTGTTTGCAGGTAGAGATGGTCACAA TTAAGAATAAGAGTGAAGAGGTTTTAATTAGTTTTATTGATGTAAATATAGAGGCCTACTTTGTAATTCATAAATTTGAA CTTACAAAATAAAGAGACAGGTGAAGAATTATTGCAGAAGTTATAAGATAGAATTTATCTATGGCAAGTGTGGCATAGGG TAGCGCAATCCTCACCCCTAAGCTGGCATTTTAGGTAGAGTTAGGCGTAACCGGAATTTTTAGATTGTATCGAAGTCTAT CCTATATTCATATATAGGGCTACTCCGGCAGATGACCAGTCATGCAAACTTCACGCTCTTGAGGCGTAAGAGGGAAGTGT GAAGGTCCCACATTGACTAGAGATACAACTAAATAAGTCCTTATATAGGGTAGAGTAATCCTTACCCCTATGAGCTAGCT TTTGGGTAGAGTTAGGCATAACTCAAATTCTAAGAAGTAAATGAAAATATAGAATGTGTGCTAAATGCGAATTAGTTTAT AAATGAAAATATAGAATTTGTCTTCTCTAATTTCTATTATTAATTATGAATGACATGAGTTTTAAGGACTTTCTATTATT ATTTTTGAGCATTTATTTATATATACATAGTACAAATTATATAAAATATATCAAGAATTTACCGTAGCGGCCATCCTGCT ATGCGCTATACCGCTACAGCGTTTTGGGGTCGGTCGCTATCAGGGATTGACAACACTGCTATGTATTTTTCAGTTATAGT TTACATTAAATAGAAGAGTTTAGTTAAATTGATGCATGGTTTTGTTAAAAAGGTAAGGAAGTGAGAGAAAGAAGAAAGAA AAATCAATGAATACAGCTCTCAAAAAAAAAAAATCAATGAATACAATTACAGGCAAGGAAAAGGAAGTAGCATATTAGAG CAAGATAAAATAAAATTACTTCTATAAAGCTTATATTCAAACTGCAGTACAAGTGAACTTTACCATGGGAATAGGGGAGG GCTAAGAGTTCTAATTTCTGTACCTGAAGTCCAATAGGAAAAATGATCTAAAACATTGGTTCTAAATAACGAATCGTGAA GGTTCTTAATTAATTAGTTCAACAAAATAAGTTCTTAACGTAGCAACTAAATTGAAAGCTTTTAAGATGTCAATGTATTA CAACCAACCTTGACAGTTTTGTTACTTAGGACCTGTTTGGCTGATCTAAAATCATGTTTCTGCTAAAACAATCAAGTTAA ACTGTAGCTCAAGTTGTGCAATTTTTTTATTTTTTTATTTCTCAAGATCAATTCTGCACAAGTAAAGTAGTTGTAAAAAA AATATGGGTTTCACATCGATTATCAATTCTATTCCCTCAAAATCTATTGTGGTAAATTCACTTTTTGAATATAACATTGA AACACATTTTGGCATCAATTATTTCAAAGTCATTTCTCTTCAATCGATTGTGCTAATCATGTTATTTTTCAATTTTTAGG TCAGATTAACAGAGAATGCTTCGCTGTATGCACTTTGTAGATCATGGTTGAGAAATGGTATAATTGAAGAAAGCCAGGTC TGAGTTATATATTTGTACTTTCTAGACTTTAGTATCTGCTTATGAGATCAATCAAGTAATGATGACTTGCTAAAGATTCC TCTGCAAGTCTATAGTTTGATATGAGGAAATGATGTGAACTACATATATGTTTTGATGATTTACAAAAGTAGCAGCAACT TTAGCCAAACTATCTTTTTTTTTTCCGGTAACAAGCCAAACTATTTCTATGATAGAGTAGAATTCACATTTTTTATCTTG TGCACTCAAACTACTACTAATAAATAATTGAACTGAGGAGTTTCGATATTTGTTTTATTTAATGTTACTGTTGCGAAAAG TCTCACATTGACTAGAGATATTGCCAAGATAATCCTTATATATGGGAAAACAGTCCTCACCTAAAAGCTAACTTTTGGGG TAGAGTTAGGCCAAACAAATGGATCAAAAAAAGGGGGGGGGGGACTTTTGCAACGGGCTATACCACCCAAACCAACTGAG GGAAGTCGCATCTGCCCCATCAAATTCTAATATGATATCAAAGCCTATTCTAGATCCATTAAGTGGAGACCACCCGTAAT TGGGCACCCGCATATGTTAATTCCTGCATATTCCACGCTCCAGATGTCCAGCCCTAGGCGTGAGGGGATGTGTTGAGAAA AGTCTCACATTGAATAGAGATATGACCAAGATAGTCTTTATATATGGGAAGACAATCCTCACCTATAAGCTAGCTTTTAG GGTGGAGTTAGGCCTCTCAAATTCTAATAGTTACCCTTTGTACAAAATATATTTGATTTGCAACTAAATAAACGTAATTC TCAATGAAGTTATGCTCTAATTGTGGAGTTTGAATGAATATATTATTTTTGAAAACTTTCCAAAATAATTAATTGGTCTT AATTCTATGATGATTCATGAATCATCTAGCATCTATGGAATGAGAGAAATAGGTATGTCTTTAAGAATTAGATATCCATG GTTTCCCTTGGCCTATTTAAGTGTTTTTCCAGTGGAATGGACTCAATCTTGGTAGTAATTTGTAACAATAGGGCATAAGC AGTTCACCAACCTGGTAGTTTACTAGCTGGATTACGTAGTCTGGGTTTAAAATATTGTGACTTGGATATAACTTTTCCAC ACAAATGTCAAGTTTTATACCTGATGAAAGTAAGCTAAATTTAAATTATTTTGATCCAAATCATCGATGGAAGCTGTTTA GGCATTAAAACCGTTGCTGCTTCACCATAATATAGCTTTTACTTTTGTTGGTGAAATATTGATCCAATGTAGGCCTATCA TATAGGCCTTAAGGTTTTATTACAGTAATTTCTATGGCTTCTTTATTTATTCCCTGACGATGGAATACACCAGATTTTTT TCAGAAGCTTAGAAAAACACTTCTTGGGGTGATCTAGTTGCTTTGTAATTTGCTAACACAATAAAGAGAAGTTTATAATT TTTTCTCTAATTGATCTTCTCAAAATTGGTTAGAAAGGCAGTTTTGCTTTCTTCCTTTCTAATTTTCTCATAGTGCAGTT CTAAAGGATTATGATTTATGGCCAGTGACATGCTTTTAGGGGACGACTATATAATATGCATCAATTTATTTTGATGGGTT ATTTATTTATAATCTCATGATTCATTATACTCCGCAGCCACAGCAGAAAGAAGTAATGAAGGCACTTCCCAAACCATTGC CTGCATCCATGGTGGCTAGTCATATGTCAAACAAGAATGAACATGAAAAAGATGATGAGCAGGAAGAGGTCTGGTTTTCT GGGATAGTTGCATTTTGTTAGAAATATAATCATGCATGTGTCCTTTACCTAATAGCGTAAGCTTTTGAATTAATTGGTTC CTTGACATGGTATCAATGCCTCTATGACTAAGTGGTCTAGAGTTCAATCTTTGCCGCCCCCAATTTTTCTAATAAAAAAT TGAATTTCAGCACATGGTAGGTGGGCCTGTGCATTATCCACGCTTCAAGCCCAAGTGGGTTGTTGCGTGAGGGGACGTGT TAGAGATATAATCATGCATGTGTCTTTTACCCAACAACTAAGCTTTTGGGATAATTGGTTCATGACTCCTATATTAAAGC CATGTGTGAATGAAATCCTTATTAATATGGATGTGAGAATTGATTTATGAAGCTTGGGAAATTAGCTCTCAGCTTTCTCA TTTATCCTTATACTAATTGAATCCCTGTATTTCAAGGATTAGATGAACTATTTACAACAAGTTTCTGGAATTTCCTAACC TAAATATATAAATAATTGGATTTCAATGTAAAAGGAAATAAGACACTTAGGAAATAGGGAAATCCTCAAGACATAGAAAA TAACCATTCCATTGACACAATTTGTGTTGTTGAATAAGTTTTATTGGATAGTGCAGTTTGTGTGTGTATATATTTACAGA TATATGATCAAACTGTTGTTGAAATTATAGTTATTTCTTCAGTTCTATGCCAAGAGTTTGATCCCATTAATCTGTATCGA CTGAGTTATAATCATCTATGCTTTCAGAGCGAGGAGATTCGTATCCTCCAGGAGACTGGTATGCTCTCATCAGCAGAAGA AGTAACGAAGAGACATATGAAAGTATGAAAGATGTATTGAAATTAGAGTTATTTCTTCAATTCTATGTCAAGAGTTTAAT GCCATTAATCTATATCAACTGAGTTATAATCATCTCTGCTTTCAGCTTGAGCAGTCTGTTATGCACTTATCAGTAAAAGA TCTATTTAAGAGACATATTAAACGTGCCAAAGGAGTTAGAGCACGGTAAGTTCTATTTTAAACCCTCCCCCTTTGCCATC TTTATTTATTCATCCTGTACTAGTTGACAGTGCATTATAAGCTGTAAATACATCTTATGAAGGTTGTAGATTAATCATAA AGATTATGACAAATTTTGAATCCACATCACAGTAATTGCAAATCAAACTTTGGAAATAGGCTCAATATCTTAGACAGTCT ATGTTGAATGGATATTAATGTCCATGCCATTAAGTCGCTTTTATAATTACTTGCTCGTAGCATATGAACTTTGCTAGGAA GCTGGAAACCCAAAGAGAATTAATGAATTACTCAGATATGAATAATTAGTTGCCAAAAGCCTTTGGTTTTCCAGTTTCTA TGATATATATATGCAGTTTAAACATGATTCTATTTCGGATGACATGCACTTTACATGTTTATCACCTTATAAACATTAAG GCATTTGTTTACAATGTTTGTTAGTTTTATGCACAAAAATTATAAGAGAACATCCCTTTCAGAGTATCAGTGCTATTCTG AATCTAGTAATACATTACTACATCGTTATGGAGCTTTATTTTCTTGCTGGAGCATTAAAATAAAACATTTGTGCTTTTCC TTCTCTTTGGTTGCATATCCTAAAATGTAGTATATACGTGGCTGTTTATTTCGTTGACTGATGATTGCCACATTTTAAGT GGAAGTAGCCTCCTTCTGTTGAACATGTCTTGGGAACTGTAAATCTTCTATTTTCTGTGAAATGATGAACCTTATACAAA GAGACATCAACTTTGCAAGGACCTTTGATGGCACACATAATAATGACTATTTGTCATACTGATCCTAATCACTCTAAATT TGGCATCTAAATCACTCTATATTTGGCACTTTCATACTACTAACTTGTTTGGTACAATCCTGGACCGTAAAAAAAAACTT GTTTGGTACAATCCTGGACGCAAATCTTAGTTTTAGGATAAATCATGCTTCAAGATGAAATAAATATATCATATACTAAC GATGTTATTGCTATCCTATGTTGCTTGTAGCTTAAGGGAAGAACGATTGCAGCGCATCAAAAGGTACAGGAGTAGGCTCA GGCTTTTGCTTCCCCCACCTGTTGAACAGTTTAGAAATGACACAGCTGCTGGGTACTGACCTTGCTGACTCTACAGACAT GGCATCAGGGTTATTGGATGACACTAACAGGCATGTATTGTTTGTGTTTCCTTGAAAAGAAAGGTGCCTTCCCCGTGATA GCCAATGTAAAAATATAACTGGAAATGGATGTGAATGTTCAGCTTCTCTATATAAATTCTACAGTAGCGTACATCTGACC TATAAATTGGCAATGGTTTGAATGAGTACAATAAATTAGAAATACCTGTAAGCCAACCAACACCACCACCAACAACAACT GTATGCCTACCAATTGTTGTGTATTTTTTTATGGCTGATGAGATTACCAACTCATGAGGTATGAAAGGGTTGTGTTTGGA TTAGTTTGATTCAAACTGTAAACTAATTATGTTTTAATATCTTTCAGTTTTATAACTTTAATTTCGTTATGATTTTGGAC TTTTCTTGACACCTTGTTTACACTTTGAAGGTATAGATACTAAACTGTATTAGTTCGCTTTAAGGCAATTTTGTAGTCAA GCTTTGATTTTTTTTTTTTTTTGAAGTTTGTTATTTTCCAAAAGCAATTAGATTTCAAACTATAATGATTGTTTTGATCA ATCAATATTCAATTTTGAGGCGTGTAGCCGAGAAATGTGTTTGGCTAAAAAATGTTAATTCTGCGTGTTTTTGGGAGCAA TTACTGCAACCTAGTATCGCTTGAATTGGAGGCTAACTTGAGGTCAGAATTCCAATATTAGTTGATCTAATCATCCAATT CTCAATGGACTCATG
CDS sequence (LotjaGi3g1v0126400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCGTCGATCCCGCCGCCGCCGCCGCCACCACCACCACCGCATCAAGACCTATATCTCCACTCCCTCACCCACACCC ACACGCTCACCACCACCACCACTACCAATCACCACCACAGCAACAACAAACCCTTCCAATTCGCGCCCCAAACCCTCAAT TCCCCAAACCTCACGATCCATCATCTCACCACTATCTCTACCCTTTCGCCTCTTCCGCCCGCGGCGGCGGCCCCTTCGTT GCCAAAGGGTTTGGACCCCTCCCCGCCGATCCTACTGTCTCCGGTTACCCTCCGCCGCCGCCACCTTCTCTTATGTACTC TCATGGCGTTCGCGGCATGCACTTGGATTATCTCACTCACGCCTTACACATGAACAGGCCTCCTCACTTGCCTTACCCCC ATACGGGTCACGCTCCTCCTGCTTCTACTGCCTCGCCTCCGGTTAAAGGTCACACCAAGGCTACTGCTAGATCTGCGGCT TCGGATGTCAATGGCCACAAAGATACCAGTACAAGGGAACGAAGCAGAGATGAAACTTTTGTCGTAATCAGAGACCGTAA AGTCAGATTAACAGAGAATGCTTCGCTGTATGCACTTTGTAGATCATGGTTGAGAAATGGTATAATTGAAGAAAGCCAGC CACAGCAGAAAGAAGTAATGAAGGCACTTCCCAAACCATTGCCTGCATCCATGGTGGCTAGTCATATGTCAAACAAGAAT GAACATGAAAAAGATGATGAGCAGGAAGAGAGCGAGGAGATTCGTATCCTCCAGGAGACTGGTATGCTCTCATCAGCAGA AGAAGTAACGAAGAGACATATGAAACTTGAGCAGTCTGTTATGCACTTATCAGTAAAAGATCTATTTAAGAGACATATTA AACGTGCCAAAGGAGTTAGAGCACGCTTAAGGGAAGAACGATTGCAGCGCATCAAAAGGTACAGGAGTAGGCTCAGGCTT TTGCTTCCCCCACCTGTTGAACAGTTTAGAAATGACACAGCTGCTGGGTACTGA
Protein sequence (LotjaGi3g1v0126400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVDPAAAAATTTTASRPISPLPHPHPHAHHHHHYQSPPQQQQTLPIRAPNPQFPKPHDPSSHHYLYPFASSARGGGPFV AKGFGPLPADPTVSGYPPPPPPSLMYSHGVRGMHLDYLTHALHMNRPPHLPYPHTGHAPPASTASPPVKGHTKATARSAA SDVNGHKDTSTRERSRDETFVVIRDRKVRLTENASLYALCRSWLRNGIIEESQPQQKEVMKALPKPLPASMVASHMSNKN EHEKDDEQEESEEIRILQETGMLSSAEEVTKRHMKLEQSVMHLSVKDLFKRHIKRAKGVRARLREERLQRIKRYRSRLRL LLPPPVEQFRNDTAAGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| PANTHER | 4 | 331 | 328 | 6.0E-90 | – | |
| MobiDBLite | 133 | 176 | 44 | - | – | |
| Pfam | 172 | 321 | 150 | 2.6E-7 | ||
| Coils | 240 | 260 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Transcriptional repressor complex | A protein complex that possesses activity that prevents or downregulates transcription. |
Expression pattern of LotjaGi3g1v0126400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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