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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0137300 |
| Transcript ID | LotjaGi3g1v0137300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger protein CONSTANS; TAIR: AT3G12890.1 activator of spomin::LUC2; Swiss-Prot: sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1; TrEMBL-Plants: tr|A0A0S3SJX9|A0A0S3SJX9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0137300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:17836213..17838916) extracted from Lotus japonicus Gifu genome v1.2.
TTCGCACTATCACAATACCCTATATATATACAAGCCACAAAAGCGAAACACACCAACCATAAAACCAACACACACAAGCT CTCATCCACATTAATTATTTCCTTTTCCATGGCTCCAAATCCTCACTTCTATTCAAACTACACAATATTCAACTCTGATC TTGCAGAGTTCCAAACCCAAGCGTTGGCTTCATCACTCAATGGCAATATTACTATGCAGGACAATAATACCATGTGGGGT TGTCAAGATAGTTTAATTCCTGTGCTTGATAATGGGGAAGTTGATCATCAAATTGTGCCATCCTCACTTGATTGTGATGC CATGTCCTCTGTTTGGATGCCAAACTTTTCAGAGCAACTAGGGGGCATTTCAGACATGGCCATGCCAGCAATTTCAGGCT TCTATGGTGGCAATATTACAGGTACAGGGTATCAGAATTTCAACAGCAGATTCCAACCCAAAATTGCTGATTTTGGGGAA GAATGTTGTGGTTTTGTGGAGGAAGTTAAGCCGAATGCTTATCTTAATGCTGCCAGAGAAAGCTGGGTATGCTTAAATTT TATTAAATCCTGATAGTGTTTCTTTCAAGGCATACATAGTGCATGTAAAAAAGAAGAGTAAAATAAAATAAAATGTTGCA TGTGTAAAAAGAATGGAAGTTTTATGGTAGACCATATTAAAAATGAGTTCATTTATGAACCATTTTTTATAAATAATCTT CACTGCATATTATTTGCAATATAGTACTTATGTATTATGTTTAAAAAAAAAATAGTACATGTGTATTTAAAGTAATTTGC AGATAAACTCTTTTAACTTTTGAATCATGTTTTTCTTAATCATGATAGATAAAGCCGTAAAAGAAAGGCCCTAAACATTT TCATAAAAAAACATATTTTAATCTAGCATGAAGTTAGCTCTAGAAAGAAAAATCAATGCATGTTTAAATTTTTTTATTGT GGGAAGGATAGTTTTTGCTGATGCTAATTTAATTTATAATAGATATTTTTTTCATTAATTTTTTTTTAAAATTTATGGCA GGGAAATCAATGTACTCAAATACCAGCAGTTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAG AAAGAATTCTGCGTTATTTGAAGAAAAGAAACCAAAGAAACTTTAACAAAACCATAAAGGTCTTGTTCTCTTTCTCATAC AACACTTCCACAGGACTCTTTTAATTTTTCCCCTTTTGGATTAAACAGGAAATTGAATCTCACTTTGTCATTCACATAAT TCTGCAGTATGCATGCCGGAAAACCTTAGCTGATAGGCGAGTAAGAGTTAGAGGAAGGTTTGCGAGAAACAACGAGCTAT GTGATGAAGAGACCGCTTCAAAAAAGCACGAGAATCACCTTCACAAAGAAGACTTTTATGGTGGTGATTCATTTCAGTAT CAGGTAACTTTCATTACTTACTGTTAATATGGATATGAATTATGTAGAATCTAAGGATGACAATGATATGTCACGTAAAT CAATTGGGCTTGCTCACGGTAGACTAAGTAAAAGTAATTGTTCACAAATTGAATTTGTTTGGTTAAAAAAATTAATAGAG TGAAGAGAAACCATCTTCAAATTTCCAAACTCAATGTAAGAGAGTTAAGGGACCACCTTAATGATGGTTGTCGAGCAAGT GAAATTTTAAAGGACACATGAATAATTTTCGATTTATGAGGATGTGAGATTAAACTCGAAACCTGTGACTAATTGTGCCA ACCCAAATTGCCTTTAATAAATTGATTTATTGCACATATCATAATTAAACTGATTTTATTAATCATTTATGCAGCTAAAG AATGAAGATGAGGACTGGCTGCAAGAGGCTTTGGCAAGTTTAGTCTATTTATCCCATTCTTCACCGGAAGATATGTGACC CAGCATCAATAAATCATCATATATATGACTAGAATTTACTCCAGCACATTTGGGACTTCCTCACAGGGTTTAAACTAGCT AGTGCAAAATGAAGAGGAAGAGTTGACTCTGATTATTCAGATTGTATGCTATAGTGTATATTTTCTTTGAGAATTAAGCC AACCTTAGACGTAAACTCTAATTGCATGGCGGTGCAAGCAGCTGCTGTAGATTATTTGGTGCTAATTTAATTATGGGCAT CTTAATTTGTTTAATTAAAGGGCCTTCTTTGACTGGATACTTGGGTTGATGTTTTGAAAGATATAATATTCTTCTATGTG CATGGATGGAAGGGACTTTATGTTTGAAAAGACAGAAATATTCCGATAAACCTATAGCTTATGAGTCACAATCTCTTTAA GTGTTTGGTGGCAGTTCTTGCTATTGATGTAATTCACTCATTGTGATGATTAGGGAAAGCCACTAATCGGAAATTCAAGT TCTCATATATCCGAGCAGCGTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAGGAGCAGCGT TAGTTTAATTGATATGCGTGGGGATTTATATATAGTAATATATAGGGAAGTTTTACATTTACAATTAAGTTGCTTATAAA AAAAAACATTTACAATTAAGTCAGCTGTAGAAAGTGCTGAAAAGTGTAACTCTTGGAGTAAATCTATTTCAACCCTTTGA CCAGGTCAAGGCTCATGTGGCTCAAGCAAGGGCTTTAGGCTCAAAATAGAATTACAAAGTAAAA
CDS sequence (LotjaGi3g1v0137300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCAAATCCTCACTTCTATTCAAACTACACAATATTCAACTCTGATCTTGCAGAGTTCCAAACCCAAGCGTTGGC TTCATCACTCAATGGCAATATTACTATGCAGGACAATAATACCATGTGGGGTTGTCAAGATAGTTTAATTCCTGTGCTTG ATAATGGGGAAGTTGATCATCAAATTGTGCCATCCTCACTTGATTGTGATGCCATGTCCTCTGTTTGGATGCCAAACTTT TCAGAGCAACTAGGGGGCATTTCAGACATGGCCATGCCAGCAATTTCAGGCTTCTATGGTGGCAATATTACAGGTACAGG GTATCAGAATTTCAACAGCAGATTCCAACCCAAAATTGCTGATTTTGGGGAAGAATGTTGTGGTTTTGTGGAGGAAGTTA AGCCGAATGCTTATCTTAATGCTGCCAGAGAAAGCTGGGGAAATCAATGTACTCAAATACCAGCAGTTGAAGAGCCTAAC ATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTGCGTTATTTGAAGAAAAGAAACCAAAGAAACTT TAACAAAACCATAAAGTATGCATGCCGGAAAACCTTAGCTGATAGGCGAGTAAGAGTTAGAGGAAGGTTTGCGAGAAACA ACGAGCTATGTGATGAAGAGACCGCTTCAAAAAAGCACGAGAATCACCTTCACAAAGAAGACTTTTATGGTGGTGATTCA TTTCAGTATCAGCTAAAGAATGAAGATGAGGACTGGCTGCAAGAGGCTTTGGCAAGTTTAGTCTATTTATCCCATTCTTC ACCGGAAGATATGTGA
Protein sequence (LotjaGi3g1v0137300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPNPHFYSNYTIFNSDLAEFQTQALASSLNGNITMQDNNTMWGCQDSLIPVLDNGEVDHQIVPSSLDCDAMSSVWMPNF SEQLGGISDMAMPAISGFYGGNITGTGYQNFNSRFQPKIADFGEECCGFVEEVKPNAYLNAARESWGNQCTQIPAVEEPN IKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCDEETASKKHENHLHKEDFYGGDS FQYQLKNEDEDWLQEALASLVYLSHSSPEDM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 42 | 267 | 226 | 1.4E-88 | – | |
| PANTHER | 42 | 267 | 226 | 1.4E-88 | – | |
| ProSiteProfiles | 171 | 213 | 43 | 14.803 | ||
| Pfam | 171 | 213 | 43 | 7.6E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0137300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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