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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0174000 |
| Transcript ID | LotjaGi3g1v0174000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase 3; TAIR: AT2G27770.1 DUF868 family protein (DUF868); Swiss-Prot: sp|A4IL48|ARGB_GEOTN Acetylglutamate kinase; TrEMBL-Plants: tr|V7BVU0|V7BVU0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0174000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:24121951..24124541) extracted from Lotus japonicus Gifu genome v1.2.
TAACCTTTTTTTATTCTAGTACTAACTGGCATAAACAGATTTTAAAAAGCCACACTACTGAAGTTTCTGCCTCAATCTTC CATTCTTTGATTTCTTTCCCTTCTAATATGATGCTTGCAAATTGCAGTTATTAATATTATTAATTATGATGTGTGAGAGA GAAAGGAGAGGATCATGTTAAATGGTAATGGTCCTGTCAGGAAACAAGGTTGTCTTCTCTTTCTCATTGAATTTCCTTTC TTCCTCTGTTTTCCCCTTTCACAAACCCAACAACACTTGAAAATTGAAATGCAGCCATAATCTCCATTGAACAAAACTCA CCCATCACCCATCTTCTCCAAAACTTCAGATCTTCACAAAGAAATGAATGTTTCAGGCATGATTTCTTGTTTTAACGAAA ACGCAGTGAATGTGTCACATTCTTCATGTTCTAGCTATTCAACTTCAAAAAACTCTTGCATATCTCCAATCCTTTCACCT TCAACTCAAATTTCAGTCTCCTCTGTCTACAGAACAATCCTCTCTAACCAGAAGCAGCTTCTGATCACAGTCACATGGTG CAAGAGCCACTCCAATCAAGGACTCACCATAAGCTTTGGTGAAAACAGAGATCCATTAGCAGCTGTTTTCAGACTCAACA CAAATTCACGGTTTTTCAGGAAGAAGAAAGGAAGCAAGTTGATGGAATCTTCTGATGAAGAGTCAAGAGTTGAAGTCTTC TGGGATCTTTCAAATGCAAAATATGACACAGGACCTGAACCTGTTGATGGGTTTTTTATAGCAATTCTTGTAGATTCAGA ACTTGGTCTTGTTCTGGGTGAGATTTCTGAAGAAACTGTGACTAAGAAGCTGAAAAATCGAACCATTTTGGGTAAATCTT CACTGTTATCACGGCGAGAGCATTGTTCAGGGAACACTACCCTTTACAATACCAAGGCTCAGTTCTGTGACTCTGGAACA TGGCATGAAATTTCAATCAGATGCAGTGGTGAAAGTGAGGGTCTAAAATCCCCTGTTCTCTCTGTTTCTATTGATAAGAA GATGGTGATTCGTGTGAAGAGGTTGCAGTGGAATTTCAGGGGAAATCAAACGATTTTTGTTGATGGGTTGCTGGTGGATT TGCTTTGGGATGTTCATAACTGGTTTTTCAATGCTGATTCTGATGGGTATGCAGTTTTCATGTTCAGGACTAGGAGTGGG TTGGATAGCAGATTGTGGTTAGAGGAGAAATCTGCATTGAAAGATAAAGATGGAGATAAATTCTCCTTGTTGATCTATGC ATGTAAGAGCACATAAGATAAGATAACTTGTTCATCTTAGTCTTTTTAACCCTCTTGTTATACTCTTGTTTTTCTTTTCT CATTGTTTTTTTTAATTCTTTATTAACCATAGGAAATGCACAGTAAATAATTTTGGGTTGCAGAAATTTGAGTAATAGCA GAATAGTTGGATGTAGTCTGAGTGTCCTTTTGTTTGTCTGAGTGAGACTGATACTTATTTGAGTTTTCAGTGTTCCTGGA ATAAGGTCAAATTCTGGGTTTCTACCAAACATTGCAGTTTGATTAATAGTTGAGTACAATGGAAATTGACTTCAATTTCA ATGTAAAGGAAAAGTTTCATTCATTTTTTGTCTTGAAAGTAACATCCATTTCCACTGGTATGATATCCAAACATAGCCAT AGTGTGCGTTTGGTTCTGTGTTTAAGAGCTTTTAATCATTTTTTGTTGACAAAAATCACTTTTATGTGATTATATAAATG TTTATCAATCAACTTAAGAAAATTGGTTTTAGTCTAACTTCACTCCTAGGAAAAGCTAGATAGAGTAACTTCTGCGTTGG ACATAATCAATTATGAGATTTTATGACTTCATTTTACAACATTATCTTATAAAAATCACTTTTTCTCATAAACCTTATTT CACTCTTAAGTTACTTTTTTGTATATTGGAAAGATAAATTGCATCATCCTGGAATTGATCCCTGACCTCCCTCACCCAAC CCACATATTCCATAACTCTTACCACTTAAGCTATCATTCGGGCACACTCTTAAGTTACTTTTACTATAATTAGTTTTGCC AAAATTAATTATAAAAAATTCTGAAAACAATAGTGATTCAAACACTATGTAGTGATTTAATGGAAGAAGAAGAATACAAA TGGCTTTAAGTGGTAAATATTTATTTATTTCTCTGTAAGCAATAGAGTGGCCAGAATGATTTGGGATTAAGACATGAATA TAAGAGAAGATCTGCTAAAAGGTAAATTGAGATTCTGGTTGGTGTAATTGAATTGCTTTTAGCCTTTTGTAGGAGAATAA AGTTGAGAATCTTGTCAATGAACAATATTTTGACCAAATTATTCTCCTATGCACTTTACACTTTTGTTTGTTGCTGTTAA TTGTAACGTTACTCAAAAGATATATGTGAAATAACTGTTAAACATCTACCAGACAAGCACAGATAGCTCACATTCACAAT AGTATTGATGGCATGTTTTATCCCTAGCCAATAGCGCCATCTGATTGGTCGAGTGTTATTCTTATCAGATATTTTTATTT GTTTTTTTTTTCAGTTTTCAAAACTTTTAAC
CDS sequence (LotjaGi3g1v0174000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGTTTCAGGCATGATTTCTTGTTTTAACGAAAACGCAGTGAATGTGTCACATTCTTCATGTTCTAGCTATTCAAC TTCAAAAAACTCTTGCATATCTCCAATCCTTTCACCTTCAACTCAAATTTCAGTCTCCTCTGTCTACAGAACAATCCTCT CTAACCAGAAGCAGCTTCTGATCACAGTCACATGGTGCAAGAGCCACTCCAATCAAGGACTCACCATAAGCTTTGGTGAA AACAGAGATCCATTAGCAGCTGTTTTCAGACTCAACACAAATTCACGGTTTTTCAGGAAGAAGAAAGGAAGCAAGTTGAT GGAATCTTCTGATGAAGAGTCAAGAGTTGAAGTCTTCTGGGATCTTTCAAATGCAAAATATGACACAGGACCTGAACCTG TTGATGGGTTTTTTATAGCAATTCTTGTAGATTCAGAACTTGGTCTTGTTCTGGGTGAGATTTCTGAAGAAACTGTGACT AAGAAGCTGAAAAATCGAACCATTTTGGGTAAATCTTCACTGTTATCACGGCGAGAGCATTGTTCAGGGAACACTACCCT TTACAATACCAAGGCTCAGTTCTGTGACTCTGGAACATGGCATGAAATTTCAATCAGATGCAGTGGTGAAAGTGAGGGTC TAAAATCCCCTGTTCTCTCTGTTTCTATTGATAAGAAGATGGTGATTCGTGTGAAGAGGTTGCAGTGGAATTTCAGGGGA AATCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAATGCTGATTCTGA TGGGTATGCAGTTTTCATGTTCAGGACTAGGAGTGGGTTGGATAGCAGATTGTGGTTAGAGGAGAAATCTGCATTGAAAG ATAAAGATGGAGATAAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATAA
Protein sequence (LotjaGi3g1v0174000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNVSGMISCFNENAVNVSHSSCSSYSTSKNSCISPILSPSTQISVSSVYRTILSNQKQLLITVTWCKSHSNQGLTISFGE NRDPLAAVFRLNTNSRFFRKKKGSKLMESSDEESRVEVFWDLSNAKYDTGPEPVDGFFIAILVDSELGLVLGEISEETVT KKLKNRTILGKSSLLSRREHCSGNTTLYNTKAQFCDSGTWHEISIRCSGESEGLKSPVLSVSIDKKMVIRVKRLQWNFRG NQTIFVDGLLVDLLWDVHNWFFNADSDGYAVFMFRTRSGLDSRLWLEEKSALKDKDGDKFSLLIYACKST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 309 | 304 | 1.9E-152 | – | |
| PANTHER | 6 | 309 | 304 | 1.9E-152 | ||
| Pfam | 41 | 308 | 268 | 1.5E-87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0174000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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