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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0191700 |
| Transcript ID | LotjaGi3g1v0191700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CONSTANS-like zinc finger protein; TAIR: AT3G21880.1 B-box type zinc finger protein with CCT domain-containing protein; Swiss-Prot: sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12; TrEMBL-Plants: tr|A0A151R6T1|A0A151R6T1_CAJCA Zinc finger protein CONSTANS-LIKE 12; Found in the gene: LotjaGi3g1v0191700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27747224..27752415) extracted from Lotus japonicus Gifu genome v1.2.
CTGTGTCATGCCACACTCATTCAGTTGCCACACTCAACCTGCATAACTGGATCATCATCTTAAGCAAACATACTTTCACT TCTGAATCTGCATTTTCCTTTCTTGCTCCAATCCATGGTATCTGTGTTTCTTGATATCAGATGATTTTATGTACCAGCTT TGTCTGGGAGGAAGTTCAGCTTTTTTTTTGGTTAATTTAATAAGGTAAGTAAAGCTCACTTTTTCCTTTTTTGTTAAGCT AATGGGGAATATTGAAGAATGTTCATGTGACTATGTTAGAGGTTTCTTATTGATGATGGTGCACATTGGATTGTTCTGCA TGTTTGGCTTATTTTCATTTGCACATTTAATTTCAAGCTGATAAAAGGGTGATTTCTTGTTTTGTCATGATGCTTTGATT TTTGGTTACTTTATCTTGAAAAGGGTAAGGAGCAAGCAAGGTGGTTCAAGTTTTCAAGATCAGAACTCGCGTTAAAGGAT TAGTCACTACTGTCGGTGGTGGATACCCTCAGGCTCATCAAGAAAGTTTCAGACATTAGAATAAACAAAGCTGAGTTCCC TCTCCATCAGCTATGTTAGATCAGTTTAGTTTAGTTTTTGGCTTGAATAATCAATTTTAGCATGGAACCACTATGTGAGT TTTGTGGGGTTGCAAGAGCTGCGGTTTATTGCAAGCCAGATTCTGCTCGTCTTTGCATGGATTGTGATGGCATTGTGCAC TCTGCAAATTCTCTGTCTCGGAGGCACCCTCGTTCGTTTCTCTGTGATAAGTGCAATTTCGACTCAGCAACTGTTCGATG TAATGAATTTAAGCAAATTCTGTGTCAAGCTTGTGATTTGAATTCATATGATTGTATGGTTTTGGGACATAGGCATCAGC CACTGAATTTCTACACTGGTTGTCCATCTAATACTGAGTTTTCGAAGCTTTTGTCACATGTGTTTGATGCTAATTCCTCA TGTGGAGGTTGGGAATCAGTTACTACATTGCTTAAAAATGACACTAGTAAGCATTTGGAGCAACCTGATAAGGGTGGTTC TTCTGGTTTGGTGAGTGATAAGTTGGATGAAGTAGTGGAGCAATGTGTTAAGTTTGAACCGTGGACTGGACAATCTTCCA TCATTCCCACTAAACCAAATCACACTCAGTATGGCAAAGATCCAGCATTTTTCTTTCCTCAAGACTCAAACCAGCAAAAG GTTGTTACTTCTACTCATTTTGGTTGACATTGACAACATGTGTGTATTCTTTTTAAGTTTGAAAAGATAAGGCAACCCCT TCCATTTCAGAAGTATTTGTCATCTAATTTAATTACACAAGGATTAAGAAAGCTCCTAAATAGCCTCAAATCAATTATAG AAAAAGTGTAGCAGCAGTTGACTAAATTATCCTCTTAAAATATTTATCTCTCTACTAATGCTATCATTCAATTTAGTAGA GAACTGAAGATAACAAGAGATAGGATAAAGTTTTAAGAAAATCATGTCTTCTTACTTCTTAAATTGTCAAATATAAATGA AACAAAACTCTTTGAACTATAATAGTACTTCACAGTGTTTTTCTCACTCGGATAAGTGTTAGAAACACTCTTTTAAACAC TCTCCTATACACTCTATGTGACTGGTCTACTTTTTAAAACACTCAACATATTTGCCTCACTTTTGAAGAATAAATCAACT GGATAGAGTGTGCTTAAAAGAATGTGTTGCTAGCATTTCTTAGACAAGTGGTTAATAGTAATGGTTCCAGATCCAAGTAG TAGTATCATGTCCCTAGCTTTCTTGAGAAATGGCCAGGTTTTGCCCATTCCTCGAAAGAAGTTTGTATGGGATCCCTATC CACCAAAATTTTGACTTCTGTTGTATATTTTATTGGTCCTCATAAGAATACTCTGTTGTCCTAACTCCTAACCAAAGCTG ATACAAGCTTTTTTGTTTTCTTTTATTTGTTTAACTCATTTTAGCTGCAGGGATGTCCTAATGTCAAAGATCTAGGAATT AATGAAGGGAATGGTCTCTGTGAAGGCCTCAATGTGGATGATGTTCAATTAAACTTTGAAACTACTGCTGAAATATTTGA CTGCTCTCAAGGTGCCCCAAGATACCAGCTTGAAGGTGGAGAAATGGACTGTTTGTTAATGGATAATAAGAACATAATAG TCACAAAATCTAAAAGTCTTCTTGAGAGCACCATGGAGGTTATCCTGCAAACTTGTTTTATTATTCTCATCTTTAAAATG CTTTATCGATATATAAGATGTTTGGACCAACTTTTCCTCATAATCAATTCTGGCATCGAGAATTTACACACAGAAGCTTC TCCCCAAAATTGATTTTGACTTTAGAATCAGTTATGTAGAAAGATTCATATTAGGTTTACTAGTGACATGCTGAAGTAAC TGTTTCCTATATGTTTGTTTAAGGCATCATCGTCAGTCCAACAAGATTGTGTGGCTTTTTCACCATCCGGGGCCGGCGGC TCCTCTAGTGTGATGCAGAACATCAACAGCAATGCAAACTGTGCACTAATGACTCCTAGCTGCAACAGAAACATCAATCT GGGATTTCCTCAGGGTCAAATTCCTTCAAACATACCAATTCAATTACCCAACATTTCTGGTGAAAACAATGCTACTGAAT ATCAAGATTGTGGGCTATCTTCAATGTTTCTGCCAGGAGAATCCCCTTGGGAATCGAGTTTGGAGAGTACATGTCCACAA GCAAGGGATAAAGCTAAGATGAGATACCATGAGAAAAAGAAGACTCGAACGTATGTGCCTTAACAGTGTATATATCTTGG ATGCGTGTGGCTAAACAGCTTAATTAAGTGCTTATGCTATAAGTGCTTATTCATAAGCTATTTTGAAAAGCTTAATGAAA TAAACTCAAAATAAGTAATAAGTAGGTACAGGTGCTTATTCATAAGTAGGTCATAAGCTATTTACATAAGTTTTGCCAAA CATTTTCATAAACGCTTATGCTATAAGATAAGCTCAATAGATCTTCCAAACAAGGCCTTAATGGTAATGAAATGGAAATG GTTTGTTTAAATGAAGTTGACATGCATGTACAAACATAGGTTAAGTTACTATATGTCTAGAACAATTTAATATGTTTGGG TCAGCTTCTCTTTCCTCAGAATCAATTTTGACACTCAGCTCGTAGAAGCTTCTCCCCATAATTGATTTTAACTTTAGAGC CAATTGTAGAACGATGCTCTTAATGATGTTGTTTCTTTCTGCTGAGTTAATTACAACTGCATATTGAAGTTTATTCTCTA AATCATTTTTGTTAATGCTAGCAATACTAGTGGAAAGGATAGATAAGTGAAACTGTATGCTATTGCTAACACATACTTGG AATGAGGATAAACAGCTATTTGTAACACGATTTATTGGATATCATGACGTATCAGATGTGAAGTCATTTTCTAAACTAAG GATCATCTAGTCAGCTGCTCAGGTCTCATGAATTTCACTTATAACAACATTTTAGAGAGCCTTTCTTTGGTGATGATGGG TTGAGATTCCTAACAGATTTCTTTTTTTTTTGTTGATAGGCAAATGTTAGTGGCTAGTTGTTAGTAAGTTACAAATATTC ATCCTCAGGGTTTGAACCCTGGACCTTCCCCTCTCCACCCCATATGTCCCCCCATCTCTTACCACTTGAGCTATCCTTCT GGAACTCCTAACAGATTTCTTATGTGCAGGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCGAGAGCGGATACCAG AAAACGTGTGAAAGGAAGATTTGTTAAAGCAGGTGAAGAATATGATTATGATCCTCTTCTGACACCAGAAACCTAAGCAT ATTATCAGCAATCACTGTCTTTTACATGCAAGATATGGTTCTGATTCTAATTGGTAAGATAGTTCCTGTACATTGGGAAT ACTTTGTTTGGTTGCCAAATCCGCAGAAGTTTTGTTTATCATATAAAAGTGGGATGGAATTTTAATGCAGCTAGATTATT ATGCTAAATCTGACTGCTTAGATGGTTGATAAAGATCTATTAGAGCTTTTAACATGTTAGTTTTTAGATGAAAACAGAGA AATAAAGAAGATGTTGCATTTGGGACTTGCAGCAGAAGGGATTGCATGTATACCAAGATATTGCCTTTAATTATACCAAT ATAAAAGGTAGAATCTAATACCCTTATCTCTAACCATACATTCACTATTTGAGACTTGAGAGTAATATCCAAGTGGTTAT GAACATTATTAACTGAGTGCCTAGATCCTGCTATATATGCCTTTAAAACTTTAGTTCCTATTATGTTTTTTGCTTCTGCT TTCTGACAAATATGATAAGACTTGTTTGGTTGCATAAGCACTAGTCTTGAAGAGATAGCATATAATTTTCCCTCTTCATT CCTAATTTCAAGGCAGTGTTATTTTCAAAATCATCTCTTGTCTTCTCTGTTGACATATGGAGTATATTGGTTATCAGTCA TCACTCCTTCAATTGCAGGCCTACATATTCTTTCAGAGGAGGTGTTGATCCATTCTGAATTTTAACAGGTTAGGTTGTTT GAGACTCTGAGACTGAGACACTGTCCTTTACAATCACCTTCTGATAAAGAATAAAAGGGAAACTGGTGTTTGGCAAAGCA ACTATATTCAACCTCAATTTTTCTGCTTTCAGCTTGGATGAGATGGGTCCTAGACCTTCACAAAATAAAAAACCACTCTC TCAACTTCAACCATTGTCCAAGGACAGGAACTTCTTGATTTTTGAGACACATCATTTATTCCATTTTCATCAGATTAGAG AGCAAGCATATGGTCAATTGTGGATTGGAATACTATTGTTCTTGACTTGATTGAAGCCAGTTTCTCCTGCAGGATAAACC ACATGCATCTTTGGCAACCTAAGTCATTTTTTCTGTGACTTAGTTTTCTACTGCCTCACTTATGTCATTTTCTATTGCTC ATTATTTTCTTTGGGAACAGTAGCTATTTTTCAATAATTTTCCAACATGGTGGTGTACAAACATTGTTTGCCACTTTGTC TGCCTTCAAGGGAAGTTGATTTATCCTATGAAGCTTGTTTTGCAAAAATTCAATGCAGGAATTACCAGCAATGATTGTCT ATTACTGTTTTTATTCATTGAACATGAGAATAAATTCAGTAGAATTTTTGCTATCAGAGAACAACAGTTGCC
CDS sequence (LotjaGi3g1v0191700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCACTATGTGAGTTTTGTGGGGTTGCAAGAGCTGCGGTTTATTGCAAGCCAGATTCTGCTCGTCTTTGCATGGA TTGTGATGGCATTGTGCACTCTGCAAATTCTCTGTCTCGGAGGCACCCTCGTTCGTTTCTCTGTGATAAGTGCAATTTCG ACTCAGCAACTGTTCGATGTAATGAATTTAAGCAAATTCTGTGTCAAGCTTGTGATTTGAATTCATATGATTGTATGGTT TTGGGACATAGGCATCAGCCACTGAATTTCTACACTGGTTGTCCATCTAATACTGAGTTTTCGAAGCTTTTGTCACATGT GTTTGATGCTAATTCCTCATGTGGAGGTTGGGAATCAGTTACTACATTGCTTAAAAATGACACTAGTAAGCATTTGGAGC AACCTGATAAGGGTGGTTCTTCTGGTTTGGTGAGTGATAAGTTGGATGAAGTAGTGGAGCAATGTGTTAAGTTTGAACCG TGGACTGGACAATCTTCCATCATTCCCACTAAACCAAATCACACTCAGTATGGCAAAGATCCAGCATTTTTCTTTCCTCA AGACTCAAACCAGCAAAAGCTGCAGGGATGTCCTAATGTCAAAGATCTAGGAATTAATGAAGGGAATGGTCTCTGTGAAG GCCTCAATGTGGATGATGTTCAATTAAACTTTGAAACTACTGCTGAAATATTTGACTGCTCTCAAGGTGCCCCAAGATAC CAGCTTGAAGGTGGAGAAATGGACTGTTTGTTAATGGATAATAAGAACATAATAGTCACAAAATCTAAAAGTCTTCTTGA GAGCACCATGGAGGCATCATCGTCAGTCCAACAAGATTGTGTGGCTTTTTCACCATCCGGGGCCGGCGGCTCCTCTAGTG TGATGCAGAACATCAACAGCAATGCAAACTGTGCACTAATGACTCCTAGCTGCAACAGAAACATCAATCTGGGATTTCCT CAGGGTCAAATTCCTTCAAACATACCAATTCAATTACCCAACATTTCTGGTGAAAACAATGCTACTGAATATCAAGATTG TGGGCTATCTTCAATGTTTCTGCCAGGAGAATCCCCTTGGGAATCGAGTTTGGAGAGTACATGTCCACAAGCAAGGGATA AAGCTAAGATGAGATACCATGAGAAAAAGAAGACTCGAACGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCGAGA GCGGATACCAGAAAACGTGTGAAAGGAAGATTTGTTAAAGCAGGTGAAGAATATGATTATGATCCTCTTCTGACACCAGA AACCTAA
Protein sequence (LotjaGi3g1v0191700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPLCEFCGVARAAVYCKPDSARLCMDCDGIVHSANSLSRRHPRSFLCDKCNFDSATVRCNEFKQILCQACDLNSYDCMV LGHRHQPLNFYTGCPSNTEFSKLLSHVFDANSSCGGWESVTTLLKNDTSKHLEQPDKGGSSGLVSDKLDEVVEQCVKFEP WTGQSSIIPTKPNHTQYGKDPAFFFPQDSNQQKLQGCPNVKDLGINEGNGLCEGLNVDDVQLNFETTAEIFDCSQGAPRY QLEGGEMDCLLMDNKNIIVTKSKSLLESTMEASSSVQQDCVAFSPSGAGGSSSVMQNINSNANCALMTPSCNRNINLGFP QGQIPSNIPIQLPNISGENNATEYQDCGLSSMFLPGESPWESSLESTCPQARDKAKMRYHEKKKTRTFGKQIRYASRKAR ADTRKRVKGRFVKAGEEYDYDPLLTPET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 416 | 416 | 2.8E-92 | – | |
| PANTHER | 1 | 416 | 416 | 2.8E-92 | – | |
| ProSiteProfiles | 1 | 47 | 47 | 9.101 | ||
| SMART | 1 | 47 | 47 | 7.5E-9 | ||
| CDD | 3 | 47 | 45 | 2.42124E-5 | ||
| ProSiteProfiles | 43 | 88 | 46 | 9.086 | ||
| Pfam | 372 | 414 | 43 | 1.3E-16 | ||
| ProSiteProfiles | 372 | 414 | 43 | 14.644 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0191700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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