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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0198000 |
| Transcript ID | LotjaGi3g1v0198000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT2G38310.1 PYR1-like 4; Swiss-Prot: sp|O80920|PYL4_ARATH Abscisic acid receptor PYL4; TrEMBL-Plants: tr|A0A0L9VT31|A0A0L9VT31_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0198000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28980469..28983368) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTTAATACGACCCCCACATGAAACCTCTCTTCTTCTTTACAAAATCAAACCCCACTAGTCTCTACCACTCAACAAT CCCCACAAAAAACAACTTCCAAGCTCAAAACTACTAGGCTTCTACTACTATATAACCCTTCCTTCATAGCAAACACAAAC CCCCCCTTCTTTCATCTCCAAATCTCTTCTTCAACTTCAATTCTCCTCATTTTCTCTTTCTTTCATTAGGGGAAAAAGAA AAGAAAATATAGATCCATCATAAACCCTTTCAAGAAACCATTCTCAAATTGATAAGTAAGAAAGAAGAGATCACACTACA ACTCATTTCTTCATCATCTTAATATAAAAAAATGCCCCCAAACCCACCCAAGTCATCTCTCCTCCTCCACCGGATCAACC ACACCACCACAGTTAACTGCCACGACCTCCATCGTGACACCATCCTCGTGAGGACCCCCGCCGCCGTCCCCGACACAGTG GCGCGCTACCACACCCACGCCGTCTCCCCGAACCAGTGCTGCTCCGCAGTGGTTCAAGAAACCACCGCCTCCATCGCCAC CGTCTGGTCCGTCGTGCGGCGCTTCGACAACCCGCAAGCCTACAAACACTTCGTCAAGAGCTGTCATGTCATCGGCGGCG ACGGCAACGTCGGCACACTCCGGGAAGTCCACGTCATCTCCGGCCTCCCCGCTGGCCGGAGCACCGAGCGGCTTGAGATC CTCGACGAGGAGCGCCATGTCCTCAGCTTCAGCGTCGTCGGCGGAGACCACCGGCTCGCGAACTACCGGTCCGTCACTAC GCTCCACCCCTCCGCCGCCGGAGACGGCACCGGGACGGTGGTTGTGGAGTCGTACGTGGTGGATGTTCCGCCGGGAAACA CGAAAGAGGACACGCGCGTGTTCGTGGACACGATTGTCGGGTGCAACCTTCAGTCACTCGCGCAAACCGCTGAGAGCTTG ACACAACCAAACAATAACAAGTGATCTTCCTAATTTTCCTTTTTTTCTTTTTATTTTTTCTTTACAATTTTCACATTTAG TGTTTTGTATGTATTATGTAAATGGTAATCGTCAATTTAGTATTATGTATACTGTGAGATTTTGAGATTTGTATGTTTGT TCATAGAAATCAGAACTCAATTTGTTTGCATGTTTGTCACCGGCCGTTTATCGTTTAATGAAAACATCCGGCAAAGAAAT TAGTCACTACCATCGACCGTCGACAGTGGATACATTTATTCATCAAAAACCTAATGTGCTGTGATTTTAATCTCAAAGTT GATTATGTGTGATAATTAGTGGAAATAAGAATGAGATAGAATTAACGGATGGTAATTGATCAATAGAATTAGTGTGAAAG TAAATAATGTGGGTGATAATCTAATTGGGGCCACTTCCTTTTTTAAATAAGCAAGTGGAGATGGTGGTAATGTGGTAAGA TAATTGCAATGATTAATTTATACGTCTGATAAATCAATGGAAGTAAGGTTTTGGTTGTTTCTGAATTCTTTTCTTTTTGT TACTCAAAAAAAGAATTGAATATTTATTTGTATAATTATATACATAAATAGAATATAGCTAGTGGTTATATATATGTCAT GAATTACGTTACCAGATAAAATGCATAGAGACCTTAATTTCAAATTGAGTTCCCGGGAGTTATGGCGAATATGTCGATAA CTATGATTGTGATTTATGATGCAACTTGCAGTATGGGTTATATTTTGGTTATGGCTGTCATCGATAGCTTTATCTTTTGT ATAGATAGAAGAACATAATTATACGTCTCGTATTGTATAGTGTGTACACTTACGTATATTCCATAATATATATATAAAGA AAATTATAAACAAGGAACATCTTATAATCAGAACAGAAGAAAGTAAATATATACCAAAAAAATTGCAAGTTGCAGTGAAT AATAATCGTAGTAGTTAATAATGTTTTGGCGTACTATGCAGACACTAAGGTTTTATTTTATTTAATTTGCAAGTTGCAGA GTATAATAATAATATTAGTTGGTGTATGTAGATACTGAAGCTTTATTTTAATTCAAGTTGTGTGTGAGAGAGATAAGCTA GCGAGACCTAACCACTGGAAAGAGAAAGAAATGGAATCAAGAGTGAGCATTGAAACCCAAATAGAGAAAAAAATAATGGT GACATATAAACATGTTGGAACGTGAATGAGGAATAGTACAAAGTCCTTTTATGCAAGTTGATGAGCAAGTGGGAGAGAAG AGACACAACACGAGGAAGAAGGGAGAAAAAGATAGACAACATGCTAGCTCTTAATTATCCCGTGACGTGCACCTCCTTTT TTATTTAGTTTGTGCACTTTCCGGGTTTTGAATTTTGAAATATGATGTAATGTTAAACGAAAAATTTGTGTACCAATTTT TTTTAGGAGAACCTAATATGCACCATTTTTAGGTGGTGTAATTTTACACCACCTACTTTGATTGGGTGTAGCAGGTTAAC ACATTATTTTTTTAAGAAAAAATATCATTAAAAATTTGTCATATATTAAATATCTTTAAAAAAAGATGTGTTAACCTGTT ATAGCAGGTTAAAAAAAGTGGTCTAACCCTAGTTGCTAAGTGTGCGTCGGGTACCCAAGGATGGTGTTTTAGGGTTTGTG TTTGTGAGTCCTTGTTCTGTGATTTTGTACACCACTCTATTGACTCCATTGATAAATCATATGGCTTAGAGTTGATTTGT TTTAGTTGAGTTGTAATCTCTTCAATTGTTGTTTGATCATGAGATCTGTCTTTACTCTTGTGTAAGTTTCAATCACTGTG GCAGTGATTGTGAGAGAAAGTGAGAGGGGGTTCTCATACTTAGGGGGAGACCTAAGTAATAAATCACGGGTAGGAATAGG TAGAAAGGCTGGGAACTGGG
CDS sequence (LotjaGi3g1v0198000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCCCAAACCCACCCAAGTCATCTCTCCTCCTCCACCGGATCAACCACACCACCACAGTTAACTGCCACGACCTCCA TCGTGACACCATCCTCGTGAGGACCCCCGCCGCCGTCCCCGACACAGTGGCGCGCTACCACACCCACGCCGTCTCCCCGA ACCAGTGCTGCTCCGCAGTGGTTCAAGAAACCACCGCCTCCATCGCCACCGTCTGGTCCGTCGTGCGGCGCTTCGACAAC CCGCAAGCCTACAAACACTTCGTCAAGAGCTGTCATGTCATCGGCGGCGACGGCAACGTCGGCACACTCCGGGAAGTCCA CGTCATCTCCGGCCTCCCCGCTGGCCGGAGCACCGAGCGGCTTGAGATCCTCGACGAGGAGCGCCATGTCCTCAGCTTCA GCGTCGTCGGCGGAGACCACCGGCTCGCGAACTACCGGTCCGTCACTACGCTCCACCCCTCCGCCGCCGGAGACGGCACC GGGACGGTGGTTGTGGAGTCGTACGTGGTGGATGTTCCGCCGGGAAACACGAAAGAGGACACGCGCGTGTTCGTGGACAC GATTGTCGGGTGCAACCTTCAGTCACTCGCGCAAACCGCTGAGAGCTTGACACAACCAAACAATAACAAGTGA
Protein sequence (LotjaGi3g1v0198000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPNPPKSSLLLHRINHTTTVNCHDLHRDTILVRTPAAVPDTVARYHTHAVSPNQCCSAVVQETTASIATVWSVVRRFDN PQAYKHFVKSCHVIGGDGNVGTLREVHVISGLPAGRSTERLEILDEERHVLSFSVVGGDHRLANYRSVTTLHPSAAGDGT GTVVVESYVVDVPPGNTKEDTRVFVDTIVGCNLQSLAQTAESLTQPNNNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 206 | 179 | 7.7E-96 | – | |
| PANTHER | 28 | 206 | 179 | 7.7E-96 | – | |
| Gene3D | 34 | 204 | 171 | 4.7E-79 | ||
| CDD | 56 | 201 | 146 | 7.1667E-30 | – | |
| SUPERFAMILY | 56 | 199 | 144 | 3.5E-35 | – | |
| Pfam | 59 | 201 | 143 | 9.7E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0198000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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